RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 RPS10P5Q9NQ39 176 aa10.61□□□□□ -0.71
BRAT1-202ENST00000421712 CARHSP1Q9Y2V2 147 aaKnown RBP10.61□□□□□ -0.71
BRAT1-202ENST00000421712 FRAS1Q86XX4 4008 aa10.61□□□□□ -0.71
BRAT1-202ENST00000421712 DNAH2Q9P225 4427 aa10.6□□□□□ -0.71
BRAT1-202ENST00000421712 TRAV8-3A0A0A6YYJ7 113 aa10.6□□□□□ -0.71
BRAT1-202ENST00000421712 APOC3P02656 99 aa10.6□□□□□ -0.71
BRAT1-202ENST00000421712 S100PP25815 95 aa10.6□□□□□ -0.71
BRAT1-202ENST00000421712 LAGE3Q14657 143 aa10.6□□□□□ -0.71
BRAT1-202ENST00000421712 MPV17L2Q567V2 206 aa10.6□□□□□ -0.71
BRAT1-202ENST00000421712 CLRN3Q8NCR9 226 aa10.6□□□□□ -0.71
BRAT1-202ENST00000421712 APCSP02743 223 aa10.59□□□□□ -0.71
BRAT1-202ENST00000421712 RHEBQ15382 184 aa10.59□□□□□ -0.71
BRAT1-202ENST00000421712 Q6ZRN7 208 aaPredicted RBP10.59□□□□□ -0.71
BRAT1-202ENST00000421712 Q8N976 141 aa10.59□□□□□ -0.71
BRAT1-202ENST00000421712 UBE2WQ96B02 151 aa10.59□□□□□ -0.71
BRAT1-202ENST00000421712 TMEM70Q9BUB7 260 aa10.59□□□□□ -0.71
BRAT1-202ENST00000421712 D6R8Y8 96 aa10.58□□□□□ -0.72
BRAT1-202ENST00000421712 VCYO14598 125 aa10.58□□□□□ -0.72
BRAT1-202ENST00000421712 RBX1P62877 108 aa10.58□□□□□ -0.72
BRAT1-202ENST00000421712 NRACQ8N912 160 aa10.58□□□□□ -0.72
BRAT1-202ENST00000421712 TM2D2Q9BX73 214 aa10.58□□□□□ -0.72
BRAT1-202ENST00000421712 EREGO14944 169 aa10.57□□□□□ -0.72
BRAT1-202ENST00000421712 CRPP02741 224 aa10.57□□□□□ -0.72
BRAT1-202ENST00000421712 POLR2KP53803 58 aaKnown RBP10.57□□□□□ -0.72
BRAT1-202ENST00000421712 SUMO2P61956 95 aaKnown RBP10.57□□□□□ -0.72
BRAT1-202ENST00000421712 RMI2Q96E14 147 aa10.57□□□□□ -0.72
BRAT1-202ENST00000421712 TMEM242Q9NWH2 141 aa10.57□□□□□ -0.72
BRAT1-202ENST00000421712 TNFRSF6BO95407 300 aa10.56□□□□□ -0.72
BRAT1-202ENST00000421712 PPBPP02775 128 aa10.56□□□□□ -0.72
BRAT1-202ENST00000421712 FCER1GP30273 86 aa10.56□□□□□ -0.72
BRAT1-202ENST00000421712 Q0VG73 95 aa10.56□□□□□ -0.72
BRAT1-202ENST00000421712 AMMECR1LQ6DCA0 310 aa10.56□□□□□ -0.72
BRAT1-202ENST00000421712 TMEM136Q6ZRR5 245 aa10.56□□□□□ -0.72
BRAT1-202ENST00000421712 ORMDL3Q8N138 153 aa10.56□□□□□ -0.72
BRAT1-202ENST00000421712 SVBPQ8N300 66 aa10.56□□□□□ -0.72
BRAT1-202ENST00000421712 IGKV2D-24A0A075B6R9 120 aa10.55□□□□□ -0.72
BRAT1-202ENST00000421712 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.55□□□□□ -0.72
BRAT1-202ENST00000421712 TRAV9-1A0A075B6T8 112 aa10.55□□□□□ -0.72
BRAT1-202ENST00000421712 TRBV27A0A0K0K1C4 114 aa10.55□□□□□ -0.72
BRAT1-202ENST00000421712 A0A1B0GVY2 172 aa10.55□□□□□ -0.72
BRAT1-202ENST00000421712 IGKV2-29A2NJV5 120 aaPredicted RBP10.55□□□□□ -0.72
BRAT1-202ENST00000421712 SNAPINO95295 136 aa10.55□□□□□ -0.72
BRAT1-202ENST00000421712 RNASEKQ6P5S7 137 aaKnown RBP10.55□□□□□ -0.72
BRAT1-202ENST00000421712 CLPSL2Q6UWE3 100 aa10.55□□□□□ -0.72
BRAT1-202ENST00000421712 KIR2DL4Q99706 377 aa10.55□□□□□ -0.72
BRAT1-202ENST00000421712 C20orf78Q9BR46 151 aa10.55□□□□□ -0.72
BRAT1-202ENST00000421712 TRBV24-1A0A075B6N3 115 aa10.54□□□□□ -0.72
BRAT1-202ENST00000421712 TSHBP01222 138 aa10.54□□□□□ -0.72
BRAT1-202ENST00000421712 SLC7A5P1Q8MH63 180 aa10.54□□□□□ -0.72
BRAT1-202ENST00000421712 LINC00269Q8N2A0 174 aa10.54□□□□□ -0.72
BRAT1-202ENST00000421712 PRELID3AQ96N28 172 aa10.54□□□□□ -0.72
BRAT1-202ENST00000421712 DNAH17Q9UFH2 4485 aa10.54□□□□□ -0.72
BRAT1-202ENST00000421712 A0A1B0GUV1 79 aa10.53□□□□□ -0.72
BRAT1-202ENST00000421712 NPYP01303 97 aa10.53□□□□□ -0.72
BRAT1-202ENST00000421712 ENHOQ6UWT2 76 aa10.53□□□□□ -0.72
BRAT1-202ENST00000421712 C1orf43Q9BWL3 253 aa10.53□□□□□ -0.72
BRAT1-202ENST00000421712 COX11Q9Y6N1 276 aa10.53□□□□□ -0.72
BRAT1-202ENST00000421712 IGLV4-60A0A075B6I1 120 aa10.52□□□□□ -0.73
BRAT1-202ENST00000421712 H7C423 109 aa10.52□□□□□ -0.73
BRAT1-202ENST00000421712 PHOX2AO14813 284 aa10.52□□□□□ -0.73
BRAT1-202ENST00000421712 SPATA12Q7Z6I5 190 aa10.52□□□□□ -0.73
BRAT1-202ENST00000421712 C20orf203Q8NBC4 194 aa10.52□□□□□ -0.73
BRAT1-202ENST00000421712 FAT2Q9NYQ8 4349 aa10.52□□□□□ -0.73
BRAT1-202ENST00000421712 A0A087WTM6 91 aa10.51□□□□□ -0.73
BRAT1-202ENST00000421712 FGF6P10767 208 aa10.51□□□□□ -0.73
BRAT1-202ENST00000421712 TMEM101Q96IK0 257 aa10.51□□□□□ -0.73
BRAT1-202ENST00000421712 SMIM2Q9BVW6 85 aa10.51□□□□□ -0.73
BRAT1-202ENST00000421712 IGKV3OR2-268A0A0C4DH90 116 aa10.5□□□□□ -0.73
BRAT1-202ENST00000421712 LOC389332A0A1B0GUA5 103 aa10.5□□□□□ -0.73
BRAT1-202ENST00000421712 ESDP10768 282 aa10.5□□□□□ -0.73
BRAT1-202ENST00000421712 REG3AQ06141 175 aa10.5□□□□□ -0.73
BRAT1-202ENST00000421712 MIAQ16674 131 aa10.5□□□□□ -0.73
BRAT1-202ENST00000421712 MAP1LC3AQ9H492 121 aa10.5□□□□□ -0.73
BRAT1-202ENST00000421712 TCAPO15273 167 aa10.49□□□□□ -0.73
BRAT1-202ENST00000421712 RAB5AP20339 215 aa10.49□□□□□ -0.73
BRAT1-202ENST00000421712 RPL32P62910 135 aaKnown RBP10.49□□□□□ -0.73
BRAT1-202ENST00000421712 KIAA1644Q3SXP7 199 aa10.49□□□□□ -0.73
BRAT1-202ENST00000421712 PRR34Q9NV39 138 aa10.49□□□□□ -0.73
BRAT1-202ENST00000421712 LAMTOR2Q9Y2Q5 125 aa10.49□□□□□ -0.73
BRAT1-202ENST00000421712 C16orf90A8MZG2 172 aa10.48□□□□□ -0.73
BRAT1-202ENST00000421712 LECT2O14960 151 aa10.48□□□□□ -0.73
BRAT1-202ENST00000421712 HLA-DQA1P01909 254 aa10.48□□□□□ -0.73
BRAT1-202ENST00000421712 SMAGPQ0VAQ4 97 aa10.48□□□□□ -0.73
BRAT1-202ENST00000421712 COX19Q49B96 90 aa10.48□□□□□ -0.73
BRAT1-202ENST00000421712 DGAT2L7PQ6IED9 249 aa10.48□□□□□ -0.73
BRAT1-202ENST00000421712 OR5A1Q8NGJ0 315 aa10.48□□□□□ -0.73
BRAT1-202ENST00000421712 BAALCQ8WXS3 180 aa10.48□□□□□ -0.73
BRAT1-202ENST00000421712 TMEM18Q96B42 140 aa10.48□□□□□ -0.73
BRAT1-202ENST00000421712 IGLV10-54A0A075B6I4 117 aa10.47□□□□□ -0.73
BRAT1-202ENST00000421712 LRCOL1A6NCL2 159 aa10.47□□□□□ -0.73
BRAT1-202ENST00000421712 ZNF25P17030 456 aaPredicted RBP10.47□□□□□ -0.73
BRAT1-202ENST00000421712 GNB1LQ9BYB4 327 aa10.47□□□□□ -0.73
BRAT1-202ENST00000421712 TGIF2-C20orf24A0A0A6YYL0 155 aa10.46□□□□□ -0.73
BRAT1-202ENST00000421712 FUSP35637 526 aaKnown RBP eCLIP10.46□□□□□ -0.73
BRAT1-202ENST00000421712 KRTAP10-2P60368 255 aa10.46□□□□□ -0.73
BRAT1-202ENST00000421712 MAPKAPK5-AS1Q8N8E1 139 aa10.46□□□□□ -0.73
BRAT1-202ENST00000421712 PGPEP1Q9NXJ5 209 aa10.46□□□□□ -0.73
BRAT1-202ENST00000421712 TRAV8-4A0A0B4J246 113 aa10.45□□□□□ -0.74
BRAT1-202ENST00000421712 FABP9Q0Z7S8 132 aa10.45□□□□□ -0.74
BRAT1-202ENST00000421712 MT-ND6P03923 174 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms