RNA–Protein interactions for RNA: ENST00000421386.1

SCG2-202, Transcript of secretogranin II, humanhuman

TSL 3

Gene SCG2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-202ENST00000421386 PIK3CD-AS1Q5SR53 167 aa3.72□□□□□ -1.81
SCG2-202ENST00000421386 C10orf55Q5SWW7 151 aa3.72□□□□□ -1.81
SCG2-202ENST00000421386 ENHOQ6UWT2 76 aa3.72□□□□□ -1.81
SCG2-202ENST00000421386 UNQ9165/PRO28630Q6UXU0 137 aa3.72□□□□□ -1.81
SCG2-202ENST00000421386 ATP11AUNQ6ZP68 121 aa3.72□□□□□ -1.81
SCG2-202ENST00000421386 Q6ZTC4 211 aa3.72□□□□□ -1.81
SCG2-202ENST00000421386 C20orf203Q8NBC4 194 aa3.72□□□□□ -1.81
SCG2-202ENST00000421386 TMEM254Q8TBM7 123 aa3.72□□□□□ -1.81
SCG2-202ENST00000421386 ZNF625Q96I27 306 aaPredicted RBP3.72□□□□□ -1.81
SCG2-202ENST00000421386 FAM218AQ96MZ4 157 aa3.72□□□□□ -1.81
SCG2-202ENST00000421386 ORMDL1Q9P0S3 153 aa3.72□□□□□ -1.81
SCG2-202ENST00000421386 KIF25-AS1Q9Y6Z4 181 aa3.72□□□□□ -1.81
SCG2-202ENST00000421386 RP1P56715 2156 aa3.72□□□□□ -1.81
SCG2-202ENST00000421386 DOCK7Q96N67 2140 aa3.71□□□□□ -1.81
SCG2-202ENST00000421386 TRAV21A0A0B4J279 112 aa3.71□□□□□ -1.82
SCG2-202ENST00000421386 A0A0J9YXV3 536 aa3.71□□□□□ -1.82
SCG2-202ENST00000421386 C8orf87E5RJ46 101 aa3.71□□□□□ -1.82
SCG2-202ENST00000421386 H3BQ85 93 aa3.71□□□□□ -1.82
SCG2-202ENST00000421386 BUB1B-PAK6H3BSN5 160 aa3.71□□□□□ -1.82
SCG2-202ENST00000421386 K7EIM0 57 aa3.71□□□□□ -1.82
SCG2-202ENST00000421386 ZNF73O43830 326 aaPredicted RBP3.71□□□□□ -1.82
SCG2-202ENST00000421386 PDE6GP18545 87 aa3.71□□□□□ -1.82
SCG2-202ENST00000421386 UBE2AP49459 152 aa3.71□□□□□ -1.82
SCG2-202ENST00000421386 LINC00315P59091 139 aa3.71□□□□□ -1.82
SCG2-202ENST00000421386 RPL39P62891 51 aaKnown RBP3.71□□□□□ -1.82
SCG2-202ENST00000421386 HCP5Q6MZN7 132 aa3.71□□□□□ -1.82
SCG2-202ENST00000421386 SOSTDC1Q6X4U4 206 aa3.71□□□□□ -1.82
SCG2-202ENST00000421386 Q6ZSV7 163 aa3.71□□□□□ -1.82
SCG2-202ENST00000421386 LCA10Q71F78 164 aa3.71□□□□□ -1.82
SCG2-202ENST00000421386 SNURFQ9Y675 71 aa3.71□□□□□ -1.82
SCG2-202ENST00000421386 NACAE9PAV3 2078 aa3.71□□□□□ -1.82
SCG2-202ENST00000421386 PRRC2AP48634 2157 aaKnown RBP3.7□□□□□ -1.82
SCG2-202ENST00000421386 PCNX2A6NKB5 2137 aa3.7□□□□□ -1.82
SCG2-202ENST00000421386 TMEM256-PLSCR3K7ERE1 68 aa3.7□□□□□ -1.82
SCG2-202ENST00000421386 MGPP08493 103 aa3.7□□□□□ -1.82
SCG2-202ENST00000421386 FOLR3P41439 243 aa3.7□□□□□ -1.82
SCG2-202ENST00000421386 LPAL2Q16609 132 aa3.7□□□□□ -1.82
SCG2-202ENST00000421386 Q8N6K4 173 aa3.7□□□□□ -1.82
SCG2-202ENST00000421386 LEAP2Q969E1 77 aa3.7□□□□□ -1.82
SCG2-202ENST00000421386 OPRPNQ99935 248 aaPredicted RBP3.7□□□□□ -1.82
SCG2-202ENST00000421386 FAM30AQ9NZY2 134 aa3.7□□□□□ -1.82
SCG2-202ENST00000421386 SMAD5-AS1Q9Y6J3 95 aa3.7□□□□□ -1.82
SCG2-202ENST00000421386 CACNA1DQ01668 2161 aa3.7□□□□□ -1.82
SCG2-202ENST00000421386 LOC110117498A0A087WWA1 95 aa3.69□□□□□ -1.82
SCG2-202ENST00000421386 IGLV5-39A0A0G2JS06 123 aa3.69□□□□□ -1.82
SCG2-202ENST00000421386 K7EMT4 169 aa3.69□□□□□ -1.82
SCG2-202ENST00000421386 IGHV3-9P01782 118 aa3.69□□□□□ -1.82
SCG2-202ENST00000421386 CRPP02741 224 aa3.69□□□□□ -1.82
SCG2-202ENST00000421386 CCL4P13236 92 aa3.69□□□□□ -1.82
SCG2-202ENST00000421386 S100A4P26447 101 aaKnown RBP3.69□□□□□ -1.82
SCG2-202ENST00000421386 NREPQ16612 68 aa3.69□□□□□ -1.82
SCG2-202ENST00000421386 SUMO4Q6EEV6 95 aa3.69□□□□□ -1.82
SCG2-202ENST00000421386 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.69□□□□□ -1.82
SCG2-202ENST00000421386 Q6ZRP5 223 aa3.69□□□□□ -1.82
SCG2-202ENST00000421386 C7orf65Q6ZTY9 151 aa3.69□□□□□ -1.82
SCG2-202ENST00000421386 FAM19A3Q7Z5A8 133 aa3.69□□□□□ -1.82
SCG2-202ENST00000421386 DIRC1Q969H9 104 aa3.69□□□□□ -1.82
SCG2-202ENST00000421386 CYP4F30PQ9H0H9 118 aa3.69□□□□□ -1.82
SCG2-202ENST00000421386 ESM1Q9NQ30 184 aa3.69□□□□□ -1.82
SCG2-202ENST00000421386 IGHV3-64A0A075B6Q5 118 aa3.68□□□□□ -1.82
SCG2-202ENST00000421386 LOC100131303A0A0U1RQF7 123 aa3.68□□□□□ -1.82
SCG2-202ENST00000421386 EPOPA6NHQ4 379 aa3.68□□□□□ -1.82
SCG2-202ENST00000421386 ZNHIT1O43257 154 aa3.68□□□□□ -1.82
SCG2-202ENST00000421386 SPRY3O43610 288 aa3.68□□□□□ -1.82
SCG2-202ENST00000421386 TFF1P04155 84 aa3.68□□□□□ -1.82
SCG2-202ENST00000421386 LINC01547P58512 204 aaPredicted RBP3.68□□□□□ -1.82
SCG2-202ENST00000421386 SYCNQ0VAF6 134 aa3.68□□□□□ -1.82
SCG2-202ENST00000421386 KRTAP5-11Q6L8G4 156 aa3.68□□□□□ -1.82
SCG2-202ENST00000421386 MIR7-3HGQ8N6C7 128 aa3.68□□□□□ -1.82
SCG2-202ENST00000421386 ZNRF1Q8ND25 227 aa3.68□□□□□ -1.82
SCG2-202ENST00000421386 RPP25Q9BUL9 199 aaKnown RBP3.68□□□□□ -1.82
SCG2-202ENST00000421386 Q9HAA7 133 aa3.68□□□□□ -1.82
SCG2-202ENST00000421386 TNCP24821 2201 aa3.68□□□□□ -1.82
SCG2-202ENST00000421386 TRAV22A0A0B4J277 110 aa3.67□□□□□ -1.82
SCG2-202ENST00000421386 IGHV1-3A0A0C4DH29 117 aa3.67□□□□□ -1.82
SCG2-202ENST00000421386 DNAJC9-AS1A6NH13 148 aa3.67□□□□□ -1.82
SCG2-202ENST00000421386 A6NN06 94 aa3.67□□□□□ -1.82
SCG2-202ENST00000421386 IGKV3-15P01624 115 aa3.67□□□□□ -1.82
SCG2-202ENST00000421386 KLK9Q2XQG4 91 aa3.67□□□□□ -1.82
SCG2-202ENST00000421386 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.67□□□□□ -1.82
SCG2-202ENST00000421386 Q8NA96 180 aa3.67□□□□□ -1.82
SCG2-202ENST00000421386 C9orf106Q8NAJ2 232 aa3.67□□□□□ -1.82
SCG2-202ENST00000421386 SPATA3Q8NHX4 192 aa3.67□□□□□ -1.82
SCG2-202ENST00000421386 GAFA1Q96PS6 74 aa3.67□□□□□ -1.82
SCG2-202ENST00000421386 KLK9Q9UKQ9 250 aa3.67□□□□□ -1.82
SCG2-202ENST00000421386 DSCAML1Q8TD84 2053 aa3.66□□□□□ -1.82
SCG2-202ENST00000421386 IGLV11-55A0A075B6I3 123 aa3.66□□□□□ -1.82
SCG2-202ENST00000421386 A0A087X002 238 aa3.66□□□□□ -1.82
SCG2-202ENST00000421386 IGHV3-21A0A0B4J1V1 117 aa3.66□□□□□ -1.82
SCG2-202ENST00000421386 TRAV10A0A0B4J240 114 aa3.66□□□□□ -1.82
SCG2-202ENST00000421386 LCE6AA0A183 80 aa3.66□□□□□ -1.82
SCG2-202ENST00000421386 IGKV2-29A2NJV5 120 aaPredicted RBP3.66□□□□□ -1.82
SCG2-202ENST00000421386 NCR3O14931 201 aa3.66□□□□□ -1.82
SCG2-202ENST00000421386 RNASE3P12724 160 aaKnown RBP3.66□□□□□ -1.82
SCG2-202ENST00000421386 C9orf129Q5T035 196 aaKnown RBP3.66□□□□□ -1.82
SCG2-202ENST00000421386 C9orf66Q5T8R8 295 aa3.66□□□□□ -1.82
SCG2-202ENST00000421386 Q6ZS52 159 aa3.66□□□□□ -1.82
SCG2-202ENST00000421386 SEM1Q6ZVN7 128 aa3.66□□□□□ -1.82
SCG2-202ENST00000421386 LINC00269Q8N2A0 174 aa3.66□□□□□ -1.82
SCG2-202ENST00000421386 ZFAND2AQ8N6M9 145 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms