RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 RNF185Q96GF1 192 aa12.16□□□□□ -0.46
ECHDC3-202ENST00000420401 ST20Q9HBF5 79 aa12.16□□□□□ -0.46
ECHDC3-202ENST00000420401 HERC1Q15751 4861 aa12.16□□□□□ -0.46
ECHDC3-202ENST00000420401 TRBV6-5A0A0K0K1A5 114 aa12.15□□□□□ -0.46
ECHDC3-202ENST00000420401 TMEM218A2RU14 115 aa12.14□□□□□ -0.47
ECHDC3-202ENST00000420401 SDHAF1A6NFY7 115 aa12.14□□□□□ -0.47
ECHDC3-202ENST00000420401 UBE2L6O14933 153 aa12.14□□□□□ -0.47
ECHDC3-202ENST00000420401 NCR2O95944 276 aa12.14□□□□□ -0.47
ECHDC3-202ENST00000420401 PPP1R17O96001 155 aa12.14□□□□□ -0.47
ECHDC3-202ENST00000420401 CRPP02741 224 aa12.14□□□□□ -0.47
ECHDC3-202ENST00000420401 ANGP03950 147 aaKnown RBP12.14□□□□□ -0.47
ECHDC3-202ENST00000420401 AMTP48728 403 aa12.14□□□□□ -0.47
ECHDC3-202ENST00000420401 RBX1P62877 108 aa12.14□□□□□ -0.47
ECHDC3-202ENST00000420401 COMMD7Q86VX2 200 aa12.14□□□□□ -0.47
ECHDC3-202ENST00000420401 PGPEP1Q9NXJ5 209 aa12.14□□□□□ -0.47
ECHDC3-202ENST00000420401 APOBP04114 4563 aaKnown RBP12.13□□□□□ -0.47
ECHDC3-202ENST00000420401 F8W036 122 aa12.13□□□□□ -0.47
ECHDC3-202ENST00000420401 I3L3M4 83 aa12.13□□□□□ -0.47
ECHDC3-202ENST00000420401 KRTAP10-2P60368 255 aa12.13□□□□□ -0.47
ECHDC3-202ENST00000420401 HBBP68871 147 aa12.13□□□□□ -0.47
ECHDC3-202ENST00000420401 FAM104BQ5XKR9 115 aa12.13□□□□□ -0.47
ECHDC3-202ENST00000420401 MRPL54Q6P161 138 aaKnown RBP12.13□□□□□ -0.47
ECHDC3-202ENST00000420401 Q8N976 141 aa12.13□□□□□ -0.47
ECHDC3-202ENST00000420401 DEFB104AQ8WTQ1 72 aa12.13□□□□□ -0.47
ECHDC3-202ENST00000420401 IGKV2D-24A0A075B6R9 120 aa12.12□□□□□ -0.47
ECHDC3-202ENST00000420401 PMCHP20382 165 aa12.12□□□□□ -0.47
ECHDC3-202ENST00000420401 ATP5L2Q7Z4Y8 100 aa12.12□□□□□ -0.47
ECHDC3-202ENST00000420401 LRCOL1A6NCL2 159 aa12.11□□□□□ -0.47
ECHDC3-202ENST00000420401 GAS8-AS1O95177 125 aa12.11□□□□□ -0.47
ECHDC3-202ENST00000420401 APCSP02743 223 aa12.11□□□□□ -0.47
ECHDC3-202ENST00000420401 A0A1B0GUV1 79 aa12.1□□□□□ -0.47
ECHDC3-202ENST00000420401 A0A1B0GXF2 115 aa12.1□□□□□ -0.47
ECHDC3-202ENST00000420401 LINC00862A6NCI5 91 aa12.1□□□□□ -0.47
ECHDC3-202ENST00000420401 RPS10P46783 165 aaKnown RBP12.1□□□□□ -0.47
ECHDC3-202ENST00000420401 MRPL51Q4U2R6 128 aaKnown RBP12.1□□□□□ -0.47
ECHDC3-202ENST00000420401 CDPF1Q6NVV7 123 aa12.1□□□□□ -0.47
ECHDC3-202ENST00000420401 ENHOQ6UWT2 76 aa12.1□□□□□ -0.47
ECHDC3-202ENST00000420401 TMEM70Q9BUB7 260 aa12.1□□□□□ -0.47
ECHDC3-202ENST00000420401 SEC11CQ9BY50 192 aa12.1□□□□□ -0.47
ECHDC3-202ENST00000420401 DMBT1Q9UGM3 2413 aaPredicted RBP12.09□□□□□ -0.47
ECHDC3-202ENST00000420401 SMKR1H3BMG3 65 aa12.09□□□□□ -0.47
ECHDC3-202ENST00000420401 ADCYAP1P18509 176 aa12.09□□□□□ -0.47
ECHDC3-202ENST00000420401 MIAQ16674 131 aa12.09□□□□□ -0.47
ECHDC3-202ENST00000420401 LINC00269Q8N2A0 174 aa12.09□□□□□ -0.47
ECHDC3-202ENST00000420401 C1orf43Q9BWL3 253 aa12.09□□□□□ -0.47
ECHDC3-202ENST00000420401 DNAH5Q8TE73 4624 aa12.09□□□□□ -0.47
ECHDC3-202ENST00000420401 TRBV27A0A0K0K1C4 114 aa12.08□□□□□ -0.48
ECHDC3-202ENST00000420401 H7C423 109 aa12.08□□□□□ -0.48
ECHDC3-202ENST00000420401 VCYO14598 125 aa12.08□□□□□ -0.48
ECHDC3-202ENST00000420401 CKS2P33552 79 aa12.08□□□□□ -0.48
ECHDC3-202ENST00000420401 POLR2KP53803 58 aaKnown RBP12.08□□□□□ -0.48
ECHDC3-202ENST00000420401 NRACQ8N912 160 aa12.08□□□□□ -0.48
ECHDC3-202ENST00000420401 PRR34Q9NV39 138 aa12.08□□□□□ -0.48
ECHDC3-202ENST00000420401 EPM2AB3EWF7 344 aa12.07□□□□□ -0.48
ECHDC3-202ENST00000420401 Q8N814 137 aa12.07□□□□□ -0.48
ECHDC3-202ENST00000420401 IMMP2LQ96T52 175 aa12.07□□□□□ -0.48
ECHDC3-202ENST00000420401 TSHBP01222 138 aa12.06□□□□□ -0.48
ECHDC3-202ENST00000420401 SUMO2P61956 95 aaKnown RBP12.06□□□□□ -0.48
ECHDC3-202ENST00000420401 AMMECR1LQ6DCA0 310 aa12.06□□□□□ -0.48
ECHDC3-202ENST00000420401 BTF3L4Q96K17 158 aa12.06□□□□□ -0.48
ECHDC3-202ENST00000420401 CTDSP1Q9GZU7 261 aa12.06□□□□□ -0.48
ECHDC3-202ENST00000420401 PPBPP02775 128 aa12.05□□□□□ -0.48
ECHDC3-202ENST00000420401 REG3AQ06141 175 aa12.05□□□□□ -0.48
ECHDC3-202ENST00000420401 C20orf203Q8NBC4 194 aa12.05□□□□□ -0.48
ECHDC3-202ENST00000420401 NTN5Q8WTR8 489 aaPredicted RBP12.05□□□□□ -0.48
ECHDC3-202ENST00000420401 BAALCQ8WXS3 180 aa12.05□□□□□ -0.48
ECHDC3-202ENST00000420401 C20orf78Q9BR46 151 aa12.05□□□□□ -0.48
ECHDC3-202ENST00000420401 TMEM242Q9NWH2 141 aa12.05□□□□□ -0.48
ECHDC3-202ENST00000420401 IGLV4-60A0A075B6I1 120 aa12.04□□□□□ -0.48
ECHDC3-202ENST00000420401 TRBV24-1A0A075B6N3 115 aa12.04□□□□□ -0.48
ECHDC3-202ENST00000420401 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.04□□□□□ -0.48
ECHDC3-202ENST00000420401 IGKV2-29A2NJV5 120 aaPredicted RBP12.04□□□□□ -0.48
ECHDC3-202ENST00000420401 D6R8Y8 96 aa12.04□□□□□ -0.48
ECHDC3-202ENST00000420401 INAFM2P0DMQ5 153 aa12.04□□□□□ -0.48
ECHDC3-202ENST00000420401 FCER1GP30273 86 aa12.04□□□□□ -0.48
ECHDC3-202ENST00000420401 CLPSL2Q6UWE3 100 aa12.04□□□□□ -0.48
ECHDC3-202ENST00000420401 IGLV5-52A0A0A0MRZ9 124 aa12.03□□□□□ -0.48
ECHDC3-202ENST00000420401 TNFRSF6BO95407 300 aa12.03□□□□□ -0.48
ECHDC3-202ENST00000420401 FUSP35637 526 aaKnown RBP eCLIP12.03□□□□□ -0.48
ECHDC3-202ENST00000420401 RNASEKQ6P5S7 137 aaKnown RBP12.03□□□□□ -0.48
ECHDC3-202ENST00000420401 KIR2DL4Q99706 377 aa12.03□□□□□ -0.48
ECHDC3-202ENST00000420401 TRAV8-4A0A0B4J246 113 aa12.02□□□□□ -0.49
ECHDC3-202ENST00000420401 LECT2O14960 151 aa12.02□□□□□ -0.49
ECHDC3-202ENST00000420401 FGF6P10767 208 aa12.02□□□□□ -0.49
ECHDC3-202ENST00000420401 ESDP10768 282 aa12.02□□□□□ -0.49
ECHDC3-202ENST00000420401 ZNF25P17030 456 aaPredicted RBP12.02□□□□□ -0.49
ECHDC3-202ENST00000420401 C10orf91Q5T1B1 145 aa12.02□□□□□ -0.49
ECHDC3-202ENST00000420401 TMEM101Q96IK0 257 aa12.02□□□□□ -0.49
ECHDC3-202ENST00000420401 PHOX2AO14813 284 aa12.01□□□□□ -0.49
ECHDC3-202ENST00000420401 RPL32P62910 135 aaKnown RBP12.01□□□□□ -0.49
ECHDC3-202ENST00000420401 WFDC2Q14508 124 aa12.01□□□□□ -0.49
ECHDC3-202ENST00000420401 TMEM136Q6ZRR5 245 aa12.01□□□□□ -0.49
ECHDC3-202ENST00000420401 ORMDL3Q8N138 153 aa12.01□□□□□ -0.49
ECHDC3-202ENST00000420401 C7orf77A4D0Y5 90 aa12□□□□□ -0.49
ECHDC3-202ENST00000420401 TCAPO15273 167 aa12□□□□□ -0.49
ECHDC3-202ENST00000420401 GCSHP23434 173 aa12□□□□□ -0.49
ECHDC3-202ENST00000420401 CARHSP1Q9Y2V2 147 aaKnown RBP12□□□□□ -0.49
ECHDC3-202ENST00000420401 TRAV9-1A0A075B6T8 112 aa11.99□□□□□ -0.49
ECHDC3-202ENST00000420401 HLA-DQA1P01909 254 aa11.99□□□□□ -0.49
ECHDC3-202ENST00000420401 S100PP25815 95 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms