RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 BRWD1-AS2P59051 145 aa6.34□□□□□ -1.39
UBR4-206ENST00000419533 B9D2Q9BPU9 175 aa6.34□□□□□ -1.39
UBR4-206ENST00000419533 B5MCH6 92 aa6.34□□□□□ -1.39
UBR4-206ENST00000419533 REG3AQ06141 175 aa6.34□□□□□ -1.39
UBR4-206ENST00000419533 C1orf229Q6ZS94 237 aaPredicted RBP6.34□□□□□ -1.39
UBR4-206ENST00000419533 DIRC1Q969H9 104 aa6.34□□□□□ -1.39
UBR4-206ENST00000419533 HIGD1BQ9P298 99 aa6.34□□□□□ -1.39
UBR4-206ENST00000419533 G3V4G9 280 aa6.34□□□□□ -1.39
UBR4-206ENST00000419533 EIF4EBP1Q13541 118 aaPredicted RBP6.34□□□□□ -1.39
UBR4-206ENST00000419533 TP53TG3Q9ULZ0 132 aa6.34□□□□□ -1.39
UBR4-206ENST00000419533 LINC00482Q8N8I6 264 aa6.33□□□□□ -1.4
UBR4-206ENST00000419533 NTN5Q8WTR8 489 aaPredicted RBP6.33□□□□□ -1.4
UBR4-206ENST00000419533 CHD3Q12873 2000 aaKnown RBP6.33□□□□□ -1.4
UBR4-206ENST00000419533 ZFAND3Q9H8U3 227 aa6.33□□□□□ -1.4
UBR4-206ENST00000419533 SS18L2Q9UHA2 77 aa6.33□□□□□ -1.4
UBR4-206ENST00000419533 IGHV1-58A0A0C4DH39 117 aa6.33□□□□□ -1.4
UBR4-206ENST00000419533 FAM110AQ9BQ89 295 aa6.33□□□□□ -1.4
UBR4-206ENST00000419533 PIEZO2Q9H5I5 2752 aa6.33□□□□□ -1.4
UBR4-206ENST00000419533 Q8N6K4 173 aa6.33□□□□□ -1.4
UBR4-206ENST00000419533 ZFAND2AQ8N6M9 145 aa6.33□□□□□ -1.4
UBR4-206ENST00000419533 SPANXCQ9NY87 97 aa6.33□□□□□ -1.4
UBR4-206ENST00000419533 FREM1Q5H8C1 2179 aa6.33□□□□□ -1.4
UBR4-206ENST00000419533 NDUFA7O95182 113 aa6.33□□□□□ -1.4
UBR4-206ENST00000419533 LINC00269Q8N2A0 174 aa6.33□□□□□ -1.4
UBR4-206ENST00000419533 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.33□□□□□ -1.4
UBR4-206ENST00000419533 PKD1L2Q7Z442 2459 aa6.33□□□□□ -1.4
UBR4-206ENST00000419533 NAV2Q8IVL1 2488 aa6.33□□□□□ -1.4
UBR4-206ENST00000419533 E9PLD3 99 aa6.32□□□□□ -1.4
UBR4-206ENST00000419533 C20orf173Q96LM9 149 aa6.32□□□□□ -1.4
UBR4-206ENST00000419533 ZNF80P51504 273 aaPredicted RBP6.32□□□□□ -1.4
UBR4-206ENST00000419533 UFSP1Q6NVU6 142 aa6.32□□□□□ -1.4
UBR4-206ENST00000419533 A4D1N5 150 aa6.32□□□□□ -1.4
UBR4-206ENST00000419533 TRACP01848 142 aa6.32□□□□□ -1.4
UBR4-206ENST00000419533 FXYD2P54710 66 aa6.32□□□□□ -1.4
UBR4-206ENST00000419533 CRIP3Q6Q6R5 217 aa6.32□□□□□ -1.4
UBR4-206ENST00000419533 C10orf99Q6UWK7 81 aa6.32□□□□□ -1.4
UBR4-206ENST00000419533 SMR3AQ99954 134 aa6.32□□□□□ -1.4
UBR4-206ENST00000419533 SPG11Q96JI7 2443 aa6.32□□□□□ -1.4
UBR4-206ENST00000419533 FRMD6-AS1P0C7T7 363 aa6.32□□□□□ -1.4
UBR4-206ENST00000419533 Q6ZPA2 131 aa6.32□□□□□ -1.4
UBR4-206ENST00000419533 HIGD2BQ4VC39 106 aa6.31□□□□□ -1.4
UBR4-206ENST00000419533 TEN1Q86WV5 123 aa6.31□□□□□ -1.4
UBR4-206ENST00000419533 WFDC2Q14508 124 aa6.31□□□□□ -1.4
UBR4-206ENST00000419533 Q6ZUT4 128 aa6.31□□□□□ -1.4
UBR4-206ENST00000419533 ANKRD29Q8N6D5 301 aa6.31□□□□□ -1.4
UBR4-206ENST00000419533 KIR2DL5BQ8NHK3 375 aa6.31□□□□□ -1.4
UBR4-206ENST00000419533 ZNF462Q96JM2 2506 aa6.31□□□□□ -1.4
UBR4-206ENST00000419533 IGKV2-24A0A0C4DH68 120 aa6.31□□□□□ -1.4
UBR4-206ENST00000419533 MIR7-3HGQ8N6C7 128 aa6.31□□□□□ -1.4
UBR4-206ENST00000419533 TRBV6-4A0A1B0GX49 114 aa6.31□□□□□ -1.4
UBR4-206ENST00000419533 A0A1W2PPR1 153 aa6.31□□□□□ -1.4
UBR4-206ENST00000419533 ACYP1P07311 99 aa6.31□□□□□ -1.4
UBR4-206ENST00000419533 NFE4Q86UQ8 179 aa6.31□□□□□ -1.4
UBR4-206ENST00000419533 DAND5Q8N907 189 aa6.3□□□□□ -1.4
UBR4-206ENST00000419533 CHCHD10Q8WYQ3 142 aaPredicted RBP6.3□□□□□ -1.4
UBR4-206ENST00000419533 IGLC6P0CF74 106 aa6.3□□□□□ -1.4
UBR4-206ENST00000419533 IGHV4-28A0A0C4DH34 117 aa6.3□□□□□ -1.4
UBR4-206ENST00000419533 IGLV1-40P01703 118 aa6.3□□□□□ -1.4
UBR4-206ENST00000419533 P0DMU3 169 aa6.3□□□□□ -1.4
UBR4-206ENST00000419533 FAM231AP0DMU4 169 aa6.3□□□□□ -1.4
UBR4-206ENST00000419533 FAM231CP0DMU5 169 aa6.3□□□□□ -1.4
UBR4-206ENST00000419533 RBX1P62877 108 aa6.3□□□□□ -1.4
UBR4-206ENST00000419533 RS1O15537 224 aa6.29□□□□□ -1.4
UBR4-206ENST00000419533 SPATA12Q7Z6I5 190 aa6.29□□□□□ -1.4
UBR4-206ENST00000419533 FOXI1Q12951 378 aa6.29□□□□□ -1.4
UBR4-206ENST00000419533 HTTP42858 3142 aa6.29□□□□□ -1.4
UBR4-206ENST00000419533 COX7BP24311 80 aa6.29□□□□□ -1.4
UBR4-206ENST00000419533 CFAP126Q5VTH2 177 aa6.29□□□□□ -1.4
UBR4-206ENST00000419533 SMIM20Q8N5G0 67 aa6.29□□□□□ -1.4
UBR4-206ENST00000419533 PCNX3Q9H6A9 2034 aa6.29□□□□□ -1.4
UBR4-206ENST00000419533 NREPQ16612 68 aa6.29□□□□□ -1.4
UBR4-206ENST00000419533 JMJD7-PLA2G4BH0Y9G9 81 aa6.28□□□□□ -1.4
UBR4-206ENST00000419533 CRYBA4P53673 196 aa6.28□□□□□ -1.4
UBR4-206ENST00000419533 CEMP1Q6PRD7 247 aaPredicted RBP6.28□□□□□ -1.4
UBR4-206ENST00000419533 NEXN-AS1Q8NBZ9 246 aa6.28□□□□□ -1.4
UBR4-206ENST00000419533 EPG5Q9HCE0 2579 aa6.28□□□□□ -1.4
UBR4-206ENST00000419533 PRRC2AP48634 2157 aaKnown RBP6.28□□□□□ -1.4
UBR4-206ENST00000419533 ODF1Q14990 250 aa6.28□□□□□ -1.4
UBR4-206ENST00000419533 TRBV6-8A0A0A6YYG3 113 aa6.28□□□□□ -1.4
UBR4-206ENST00000419533 EXPH5Q8NEV8 1989 aa6.28□□□□□ -1.4
UBR4-206ENST00000419533 A0A1B0GXF2 115 aa6.27□□□□□ -1.41
UBR4-206ENST00000419533 TTTY13Q9BZ97 58 aa6.27□□□□□ -1.41
UBR4-206ENST00000419533 PLCE1Q9P212 2302 aa6.27□□□□□ -1.41
UBR4-206ENST00000419533 LINC00467Q9BRT7 94 aa6.27□□□□□ -1.41
UBR4-206ENST00000419533 LECT2O14960 151 aa6.27□□□□□ -1.41
UBR4-206ENST00000419533 MLST8Q9BVC4 326 aa6.27□□□□□ -1.41
UBR4-206ENST00000419533 IGLV2-8P01709 118 aa6.27□□□□□ -1.41
UBR4-206ENST00000419533 C7orf33Q8WU49 177 aa6.27□□□□□ -1.41
UBR4-206ENST00000419533 GDF5OSQ5U4N7 250 aa6.26□□□□□ -1.41
UBR4-206ENST00000419533 C18orf65Q6ZTR6 163 aa6.26□□□□□ -1.41
UBR4-206ENST00000419533 TMEM256-PLSCR3K7ERE1 68 aa6.26□□□□□ -1.41
UBR4-206ENST00000419533 MIAQ16674 131 aa6.26□□□□□ -1.41
UBR4-206ENST00000419533 LINC00322Q6ZN03 302 aaPredicted RBP6.26□□□□□ -1.41
UBR4-206ENST00000419533 KIAA1549Q9HCM3 1950 aa6.26□□□□□ -1.41
UBR4-206ENST00000419533 HIVEP3Q5T1R4 2406 aa6.26□□□□□ -1.41
UBR4-206ENST00000419533 A0A087WZ39 114 aa6.25□□□□□ -1.41
UBR4-206ENST00000419533 LINC01620Q4KN68 170 aa6.25□□□□□ -1.41
UBR4-206ENST00000419533 FASNP49327 2511 aaKnown RBP6.25□□□□□ -1.41
UBR4-206ENST00000419533 PDE6GP18545 87 aa6.25□□□□□ -1.41
UBR4-206ENST00000419533 KPRPQ5T749 579 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms