RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 PRO0461Q9UI25 63 aa9.82□□□□□ -0.84
TNFRSF8-203ENST00000417814 ATRQ13535 2644 aa9.81□□□□□ -0.84
TNFRSF8-203ENST00000417814 A0A0J9YY99 117 aa9.8□□□□□ -0.84
TNFRSF8-203ENST00000417814 CFC1BP0CG36 223 aa9.8□□□□□ -0.84
TNFRSF8-203ENST00000417814 CFC1P0CG37 223 aa9.8□□□□□ -0.84
TNFRSF8-203ENST00000417814 CLEC2BQ92478 149 aa9.8□□□□□ -0.84
TNFRSF8-203ENST00000417814 TRGV1A0A0A0MS02 117 aa9.8□□□□□ -0.84
TNFRSF8-203ENST00000417814 USMG5Q96IX5 58 aa9.8□□□□□ -0.84
TNFRSF8-203ENST00000417814 CFAP126Q5VTH2 177 aa9.8□□□□□ -0.84
TNFRSF8-203ENST00000417814 NDUFA11Q86Y39 141 aa9.8□□□□□ -0.84
TNFRSF8-203ENST00000417814 PRO1854Q9UHT4 67 aa9.8□□□□□ -0.84
TNFRSF8-203ENST00000417814 HELZ2Q9BYK8 2649 aaKnown RBP9.79□□□□□ -0.84
TNFRSF8-203ENST00000417814 GAGE12JA6NER3 117 aa9.79□□□□□ -0.84
TNFRSF8-203ENST00000417814 GAGE7O76087 117 aa9.79□□□□□ -0.84
TNFRSF8-203ENST00000417814 IGHG2P01859 326 aa9.79□□□□□ -0.84
TNFRSF8-203ENST00000417814 GAGE12FP0CL80 117 aa9.79□□□□□ -0.84
TNFRSF8-203ENST00000417814 GAGE12GP0CL81 117 aa9.79□□□□□ -0.84
TNFRSF8-203ENST00000417814 GAGE12IP0CL82 117 aa9.79□□□□□ -0.84
TNFRSF8-203ENST00000417814 SMCPP49901 116 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF8-203ENST00000417814 GAGE4Q13068 117 aa9.79□□□□□ -0.84
TNFRSF8-203ENST00000417814 MEIG1Q5JSS6 88 aa9.79□□□□□ -0.84
TNFRSF8-203ENST00000417814 ANKRD29Q8N6D5 301 aa9.79□□□□□ -0.84
TNFRSF8-203ENST00000417814 CCDC179H3BU77 68 aa9.79□□□□□ -0.84
TNFRSF8-203ENST00000417814 RPL35AP18077 110 aaKnown RBP9.79□□□□□ -0.84
TNFRSF8-203ENST00000417814 SRSF2Q01130 221 aaKnown RBP9.79□□□□□ -0.84
TNFRSF8-203ENST00000417814 TIMM21Q9BVV7 248 aa9.79□□□□□ -0.84
TNFRSF8-203ENST00000417814 RPL32P62910 135 aaKnown RBP9.78□□□□□ -0.84
TNFRSF8-203ENST00000417814 TEN1Q86WV5 123 aa9.78□□□□□ -0.84
TNFRSF8-203ENST00000417814 C10orf105Q8TEF2 133 aa9.78□□□□□ -0.84
TNFRSF8-203ENST00000417814 B4DSR2 109 aa9.78□□□□□ -0.84
TNFRSF8-203ENST00000417814 ELANEP08246 267 aa9.78□□□□□ -0.84
TNFRSF8-203ENST00000417814 PLA2G2AP14555 144 aa9.78□□□□□ -0.84
TNFRSF8-203ENST00000417814 LYRM7Q5U5X0 104 aa9.78□□□□□ -0.84
TNFRSF8-203ENST00000417814 IGLV4-69A0A075B6H9 119 aa9.78□□□□□ -0.84
TNFRSF8-203ENST00000417814 U3KQE9 123 aa9.78□□□□□ -0.84
TNFRSF8-203ENST00000417814 A0A096LPF7 62 aa9.77□□□□□ -0.85
TNFRSF8-203ENST00000417814 SLC25A20O43772 301 aa9.77□□□□□ -0.85
TNFRSF8-203ENST00000417814 TAL2Q16559 108 aa9.77□□□□□ -0.85
TNFRSF8-203ENST00000417814 F8P00451 2351 aa9.77□□□□□ -0.85
TNFRSF8-203ENST00000417814 TEX49A0A1B0GTD5 131 aa9.76□□□□□ -0.85
TNFRSF8-203ENST00000417814 TMEM61Q8N0U2 210 aa9.76□□□□□ -0.85
TNFRSF8-203ENST00000417814 CARD19Q96LW7 228 aa9.76□□□□□ -0.85
TNFRSF8-203ENST00000417814 PSMG3-AS1Q96PY0 264 aa9.76□□□□□ -0.85
TNFRSF8-203ENST00000417814 NDUFA12Q9UI09 145 aa9.76□□□□□ -0.85
TNFRSF8-203ENST00000417814 Q6ZSN1 163 aa9.76□□□□□ -0.85
TNFRSF8-203ENST00000417814 A6NDX4 124 aa9.76□□□□□ -0.85
TNFRSF8-203ENST00000417814 DCANP1Q8TF63 244 aa9.76□□□□□ -0.85
TNFRSF8-203ENST00000417814 TMEM262E9PQX1 116 aa9.75□□□□□ -0.85
TNFRSF8-203ENST00000417814 RNASE1P07998 156 aaKnown RBP9.75□□□□□ -0.85
TNFRSF8-203ENST00000417814 KRTAP10-9P60411 292 aa9.75□□□□□ -0.85
TNFRSF8-203ENST00000417814 SETXQ7Z333 2677 aaKnown RBP9.75□□□□□ -0.85
TNFRSF8-203ENST00000417814 A0A0J9YX75 114 aa9.75□□□□□ -0.85
TNFRSF8-203ENST00000417814 M0QY20 66 aa9.75□□□□□ -0.85
TNFRSF8-203ENST00000417814 APCP25054 2843 aa9.75□□□□□ -0.85
TNFRSF8-203ENST00000417814 TRAV12-1A0A0B4J245 112 aa9.75□□□□□ -0.85
TNFRSF8-203ENST00000417814 I3L3M4 83 aa9.75□□□□□ -0.85
TNFRSF8-203ENST00000417814 ATP6V0E2Q8NHE4 81 aa9.75□□□□□ -0.85
TNFRSF8-203ENST00000417814 WFDC10AQ9H1F0 79 aa9.75□□□□□ -0.85
TNFRSF8-203ENST00000417814 IGIPA6NJ69 53 aa9.74□□□□□ -0.85
TNFRSF8-203ENST00000417814 TRAV4A0A0B4J268 109 aa9.74□□□□□ -0.85
TNFRSF8-203ENST00000417814 SOCS3O14543 225 aa9.74□□□□□ -0.85
TNFRSF8-203ENST00000417814 PPP1R17O96001 155 aa9.74□□□□□ -0.85
TNFRSF8-203ENST00000417814 IGHV3-30-3P0DP02 117 aa9.74□□□□□ -0.85
TNFRSF8-203ENST00000417814 POLR2KP53803 58 aaKnown RBP9.74□□□□□ -0.85
TNFRSF8-203ENST00000417814 NDUFV3P56181 108 aaKnown RBP9.74□□□□□ -0.85
TNFRSF8-203ENST00000417814 COX8CQ7Z4L0 72 aa9.74□□□□□ -0.85
TNFRSF8-203ENST00000417814 C10orf126Q8N4M7 172 aa9.74□□□□□ -0.85
TNFRSF8-203ENST00000417814 IFITM1P13164 125 aa9.74□□□□□ -0.85
TNFRSF8-203ENST00000417814 LINC00315P59091 139 aa9.74□□□□□ -0.85
TNFRSF8-203ENST00000417814 CLPSL2Q6UWE3 100 aa9.74□□□□□ -0.85
TNFRSF8-203ENST00000417814 RBMY1A1P0DJD3 496 aaKnown RBP9.73□□□□□ -0.85
TNFRSF8-203ENST00000417814 RBMY1CP0DJD4 496 aa9.73□□□□□ -0.85
TNFRSF8-203ENST00000417814 RBMY1FQ15415 496 aaKnown RBP9.73□□□□□ -0.85
TNFRSF8-203ENST00000417814 ESM1Q9NQ30 184 aa9.73□□□□□ -0.85
TNFRSF8-203ENST00000417814 TEP1Q99973 2627 aaKnown RBP9.73□□□□□ -0.85
TNFRSF8-203ENST00000417814 ZNF22P17026 224 aaPredicted RBP9.73□□□□□ -0.85
TNFRSF8-203ENST00000417814 C2orf82Q6UX34 121 aa9.73□□□□□ -0.85
TNFRSF8-203ENST00000417814 MRPL53Q96EL3 112 aaKnown RBP9.73□□□□□ -0.85
TNFRSF8-203ENST00000417814 RHODO00212 210 aa9.72□□□□□ -0.85
TNFRSF8-203ENST00000417814 IGHV3-30P01768 117 aa9.72□□□□□ -0.85
TNFRSF8-203ENST00000417814 IGHV3-30-5P0DP03 117 aa9.72□□□□□ -0.85
TNFRSF8-203ENST00000417814 ADAMTSL4-AS1Q5T5F5 129 aa9.72□□□□□ -0.85
TNFRSF8-203ENST00000417814 C20orf203Q8NBC4 194 aa9.72□□□□□ -0.85
TNFRSF8-203ENST00000417814 IGLV4-3A0A075B6K6 122 aa9.71□□□□□ -0.85
TNFRSF8-203ENST00000417814 EIF4EBP3O60516 100 aaPredicted RBP9.71□□□□□ -0.85
TNFRSF8-203ENST00000417814 TRGV2A0A075B6R0 118 aa9.71□□□□□ -0.85
TNFRSF8-203ENST00000417814 M0R2P5 195 aa9.71□□□□□ -0.85
TNFRSF8-203ENST00000417814 CDKN2A-AS1Q9UH64 79 aa9.71□□□□□ -0.85
TNFRSF8-203ENST00000417814 CITED1Q99966 193 aa9.71□□□□□ -0.86
TNFRSF8-203ENST00000417814 LINC00467Q9BRT7 94 aa9.71□□□□□ -0.86
TNFRSF8-203ENST00000417814 LENEPQ9Y5L5 61 aa9.71□□□□□ -0.86
TNFRSF8-203ENST00000417814 CRLF1O75462 422 aa9.7□□□□□ -0.86
TNFRSF8-203ENST00000417814 TMEM141Q96I45 108 aa9.7□□□□□ -0.86
TNFRSF8-203ENST00000417814 KIF25-AS1Q9Y6Z4 181 aa9.7□□□□□ -0.86
TNFRSF8-203ENST00000417814 KLLNB2CW77 178 aa9.7□□□□□ -0.86
TNFRSF8-203ENST00000417814 PAPPA-AS1Q5QFB9 102 aa9.7□□□□□ -0.86
TNFRSF8-203ENST00000417814 SLC25A29Q8N8R3 303 aa9.7□□□□□ -0.86
TNFRSF8-203ENST00000417814 IGHV4-4A0A075B6R2 117 aa9.69□□□□□ -0.86
TNFRSF8-203ENST00000417814 DEFB130BP0DP73 79 aa9.69□□□□□ -0.86
TNFRSF8-203ENST00000417814 DEFB130AP0DP74 79 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms