RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 TMEM70Q9BUB7 260 aa15.54■□□□□ 0.08
SMARCB1-205ENST00000417137 Q9HAA7 133 aa15.54■□□□□ 0.08
SMARCB1-205ENST00000417137 KLK12Q9UKR0 248 aa15.54■□□□□ 0.08
SMARCB1-205ENST00000417137 FRAS1Q86XX4 4008 aa15.53■□□□□ 0.08
SMARCB1-205ENST00000417137 TRAV9-1A0A075B6T8 112 aa15.53■□□□□ 0.08
SMARCB1-205ENST00000417137 UBE2L6O14933 153 aa15.53■□□□□ 0.08
SMARCB1-205ENST00000417137 PPBPP02775 128 aa15.53■□□□□ 0.08
SMARCB1-205ENST00000417137 ATRAIDQ6UW56 229 aa15.53■□□□□ 0.08
SMARCB1-205ENST00000417137 VCYO14598 125 aa15.52■□□□□ 0.08
SMARCB1-205ENST00000417137 POLR2KP53803 58 aaKnown RBP15.52■□□□□ 0.08
SMARCB1-205ENST00000417137 MPV17L2Q567V2 206 aa15.52■□□□□ 0.08
SMARCB1-205ENST00000417137 NRACQ8N912 160 aa15.52■□□□□ 0.08
SMARCB1-205ENST00000417137 DEFB104AQ8WTQ1 72 aa15.52■□□□□ 0.08
SMARCB1-205ENST00000417137 TM2D2Q9BX73 214 aa15.52■□□□□ 0.08
SMARCB1-205ENST00000417137 RPS10P5Q9NQ39 176 aa15.52■□□□□ 0.08
SMARCB1-205ENST00000417137 DNAH10Q8IVF4 4471 aa15.51■□□□□ 0.07
SMARCB1-205ENST00000417137 TRBV27A0A0K0K1C4 114 aa15.51■□□□□ 0.07
SMARCB1-205ENST00000417137 PSCAO43653 123 aa15.51■□□□□ 0.07
SMARCB1-205ENST00000417137 APOC3P02656 99 aa15.51■□□□□ 0.07
SMARCB1-205ENST00000417137 APCSP02743 223 aa15.51■□□□□ 0.07
SMARCB1-205ENST00000417137 SUMO2P61956 95 aaKnown RBP15.51■□□□□ 0.07
SMARCB1-205ENST00000417137 C20orf78Q9BR46 151 aa15.51■□□□□ 0.07
SMARCB1-205ENST00000417137 TRBV24-1A0A075B6N3 115 aa15.5■□□□□ 0.07
SMARCB1-205ENST00000417137 ANGP03950 147 aaKnown RBP15.5■□□□□ 0.07
SMARCB1-205ENST00000417137 Q0VG73 95 aa15.5■□□□□ 0.07
SMARCB1-205ENST00000417137 SVBPQ8N300 66 aa15.5■□□□□ 0.07
SMARCB1-205ENST00000417137 RMI2Q96E14 147 aa15.5■□□□□ 0.07
SMARCB1-205ENST00000417137 A0A1B0GVY2 172 aa15.49■□□□□ 0.07
SMARCB1-205ENST00000417137 D6R8Y8 96 aa15.49■□□□□ 0.07
SMARCB1-205ENST00000417137 SNAPINO95295 136 aa15.49■□□□□ 0.07
SMARCB1-205ENST00000417137 RBX1P62877 108 aa15.49■□□□□ 0.07
SMARCB1-205ENST00000417137 ORMDL3Q8N138 153 aa15.49■□□□□ 0.07
SMARCB1-205ENST00000417137 UBE2WQ96B02 151 aa15.49■□□□□ 0.07
SMARCB1-205ENST00000417137 COX11Q9Y6N1 276 aa15.49■□□□□ 0.07
SMARCB1-205ENST00000417137 A0A1B0GUV1 79 aa15.48■□□□□ 0.07
SMARCB1-205ENST00000417137 H7C423 109 aa15.48■□□□□ 0.07
SMARCB1-205ENST00000417137 PHOX2AO14813 284 aa15.48■□□□□ 0.07
SMARCB1-205ENST00000417137 EREGO14944 169 aa15.48■□□□□ 0.07
SMARCB1-205ENST00000417137 TMEM136Q6ZRR5 245 aa15.48■□□□□ 0.07
SMARCB1-205ENST00000417137 Q8N976 141 aa15.48■□□□□ 0.07
SMARCB1-205ENST00000417137 KIR2DL4Q99706 377 aa15.48■□□□□ 0.07
SMARCB1-205ENST00000417137 HERC2O95714 4834 aa15.48■□□□□ 0.07
SMARCB1-205ENST00000417137 DNAH2Q9P225 4427 aa15.48■□□□□ 0.07
SMARCB1-205ENST00000417137 TNFRSF6BO95407 300 aa15.47■□□□□ 0.07
SMARCB1-205ENST00000417137 CRPP02741 224 aa15.47■□□□□ 0.07
SMARCB1-205ENST00000417137 TSHBP01222 138 aa15.46■□□□□ 0.07
SMARCB1-205ENST00000417137 FCER1GP30273 86 aa15.46■□□□□ 0.07
SMARCB1-205ENST00000417137 RPL32P62910 135 aaKnown RBP15.46■□□□□ 0.07
SMARCB1-205ENST00000417137 TCAPO15273 167 aa15.45■□□□□ 0.06
SMARCB1-205ENST00000417137 AMMECR1LQ6DCA0 310 aa15.45■□□□□ 0.06
SMARCB1-205ENST00000417137 PRELID3AQ96N28 172 aa15.45■□□□□ 0.06
SMARCB1-205ENST00000417137 LAMTOR2Q9Y2Q5 125 aa15.44■□□□□ 0.06
SMARCB1-205ENST00000417137 COX19Q49B96 90 aa15.43■□□□□ 0.06
SMARCB1-205ENST00000417137 IGKV2D-24A0A075B6R9 120 aa15.42■□□□□ 0.06
SMARCB1-205ENST00000417137 NPYP01303 97 aa15.42■□□□□ 0.06
SMARCB1-205ENST00000417137 ESDP10768 282 aa15.42■□□□□ 0.06
SMARCB1-205ENST00000417137 MIAQ16674 131 aa15.42■□□□□ 0.06
SMARCB1-205ENST00000417137 ENHOQ6UWT2 76 aa15.42■□□□□ 0.06
SMARCB1-205ENST00000417137 LINC00269Q8N2A0 174 aa15.42■□□□□ 0.06
SMARCB1-205ENST00000417137 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.41■□□□□ 0.06
SMARCB1-205ENST00000417137 IGKV2-29A2NJV5 120 aaPredicted RBP15.41■□□□□ 0.06
SMARCB1-205ENST00000417137 RNASEKQ6P5S7 137 aaKnown RBP15.41■□□□□ 0.06
SMARCB1-205ENST00000417137 SMIM2Q9BVW6 85 aa15.41■□□□□ 0.06
SMARCB1-205ENST00000417137 C1orf43Q9BWL3 253 aa15.41■□□□□ 0.06
SMARCB1-205ENST00000417137 PRR34Q9NV39 138 aa15.41■□□□□ 0.06
SMARCB1-205ENST00000417137 DNAH17Q9UFH2 4485 aa15.41■□□□□ 0.06
SMARCB1-205ENST00000417137 IGLV4-60A0A075B6I1 120 aa15.4■□□□□ 0.06
SMARCB1-205ENST00000417137 A0A087WTM6 91 aa15.4■□□□□ 0.06
SMARCB1-205ENST00000417137 HLA-DQA1P01909 254 aa15.4■□□□□ 0.06
SMARCB1-205ENST00000417137 FGF6P10767 208 aa15.4■□□□□ 0.06
SMARCB1-205ENST00000417137 SLC7A5P1Q8MH63 180 aa15.4■□□□□ 0.06
SMARCB1-205ENST00000417137 C20orf203Q8NBC4 194 aa15.4■□□□□ 0.06
SMARCB1-205ENST00000417137 TMEM101Q96IK0 257 aa15.4■□□□□ 0.06
SMARCB1-205ENST00000417137 GNB1LQ9BYB4 327 aa15.4■□□□□ 0.06
SMARCB1-205ENST00000417137 ZNF25P17030 456 aaPredicted RBP15.39■□□□□ 0.05
SMARCB1-205ENST00000417137 REG3AQ06141 175 aa15.39■□□□□ 0.05
SMARCB1-205ENST00000417137 SMAGPQ0VAQ4 97 aa15.39■□□□□ 0.05
SMARCB1-205ENST00000417137 TMEM18Q96B42 140 aa15.38■□□□□ 0.05
SMARCB1-205ENST00000417137 SPATA12Q7Z6I5 190 aa15.37■□□□□ 0.05
SMARCB1-205ENST00000417137 MAP1LC3AQ9H492 121 aa15.37■□□□□ 0.05
SMARCB1-205ENST00000417137 FAT2Q9NYQ8 4349 aa15.37■□□□□ 0.05
SMARCB1-205ENST00000417137 PRSS47A8MTI9 375 aa15.36■□□□□ 0.05
SMARCB1-205ENST00000417137 RAB5AP20339 215 aa15.36■□□□□ 0.05
SMARCB1-205ENST00000417137 CLPSL2Q6UWE3 100 aa15.36■□□□□ 0.05
SMARCB1-205ENST00000417137 PGPEP1Q9NXJ5 209 aa15.36■□□□□ 0.05
SMARCB1-205ENST00000417137 PCLOQ9Y6V0 5065 aa15.36■□□□□ 0.05
SMARCB1-205ENST00000417137 TRAV8-4A0A0B4J246 113 aa15.35■□□□□ 0.05
SMARCB1-205ENST00000417137 LRCOL1A6NCL2 159 aa15.35■□□□□ 0.05
SMARCB1-205ENST00000417137 MT-ND6P03923 174 aa15.35■□□□□ 0.05
SMARCB1-205ENST00000417137 OR5A1Q8NGJ0 315 aa15.35■□□□□ 0.05
SMARCB1-205ENST00000417137 DGAT2L7PQ6IED9 249 aa15.34■□□□□ 0.05
SMARCB1-205ENST00000417137 MRPL52Q86TS9 123 aaKnown RBP15.34■□□□□ 0.05
SMARCB1-205ENST00000417137 HECTD4Q9Y4D8 3996 aa15.34■□□□□ 0.05
SMARCB1-205ENST00000417137 LOC389332A0A1B0GUA5 103 aa15.33■□□□□ 0.04
SMARCB1-205ENST00000417137 KIAA1644Q3SXP7 199 aa15.32■□□□□ 0.04
SMARCB1-205ENST00000417137 C16orf90A8MZG2 172 aa15.31■□□□□ 0.04
SMARCB1-205ENST00000417137 MAPKAPK5-AS1Q8N8E1 139 aa15.31■□□□□ 0.04
SMARCB1-205ENST00000417137 BAALCQ8WXS3 180 aa15.31■□□□□ 0.04
SMARCB1-205ENST00000417137 CSDC2Q9Y534 153 aaKnown RBP15.31■□□□□ 0.04
SMARCB1-205ENST00000417137 TGIF2-C20orf24A0A0A6YYL0 155 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms