RNA–Protein interactions for RNA: ENST00000416319.5

FAM3A-207, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-207ENST00000416319 HLA-DQA1P01909 254 aa13.41□□□□□ -0.26
FAM3A-207ENST00000416319 PMCHP20382 165 aa13.41□□□□□ -0.26
FAM3A-207ENST00000416319 ELOBQ15370 118 aa13.41□□□□□ -0.26
FAM3A-207ENST00000416319 C1orf134Q5TEV5 83 aa13.41□□□□□ -0.26
FAM3A-207ENST00000416319 ATRAIDQ6UW56 229 aa13.41□□□□□ -0.26
FAM3A-207ENST00000416319 CHCHD5Q9BSY4 110 aa13.41□□□□□ -0.26
FAM3A-207ENST00000416319 A0A087WX48 190 aa13.4□□□□□ -0.26
FAM3A-207ENST00000416319 C6orf223Q8N319 242 aa13.4□□□□□ -0.26
FAM3A-207ENST00000416319 TMEM243Q9BU79 118 aa13.4□□□□□ -0.26
FAM3A-207ENST00000416319 FRAS1Q86XX4 4008 aa13.4□□□□□ -0.26
FAM3A-207ENST00000416319 IBA57-AS1B1ANH7 110 aa13.39□□□□□ -0.27
FAM3A-207ENST00000416319 MT-ND6P03923 174 aa13.39□□□□□ -0.27
FAM3A-207ENST00000416319 AMTP48728 403 aa13.39□□□□□ -0.27
FAM3A-207ENST00000416319 LAGE3Q14657 143 aa13.39□□□□□ -0.27
FAM3A-207ENST00000416319 PRELID3AQ96N28 172 aa13.39□□□□□ -0.27
FAM3A-207ENST00000416319 FAT2Q9NYQ8 4349 aa13.38□□□□□ -0.27
FAM3A-207ENST00000416319 TSHBP01222 138 aa13.38□□□□□ -0.27
FAM3A-207ENST00000416319 NPYP01303 97 aa13.38□□□□□ -0.27
FAM3A-207ENST00000416319 IGHV3-30P01768 117 aa13.38□□□□□ -0.27
FAM3A-207ENST00000416319 IGHV3-33P01772 117 aa13.38□□□□□ -0.27
FAM3A-207ENST00000416319 APCSP02743 223 aa13.38□□□□□ -0.27
FAM3A-207ENST00000416319 IGHV3-30-3P0DP02 117 aa13.38□□□□□ -0.27
FAM3A-207ENST00000416319 IGHV3-30-5P0DP03 117 aa13.38□□□□□ -0.27
FAM3A-207ENST00000416319 SMCO4Q9NRQ5 59 aa13.38□□□□□ -0.27
FAM3A-207ENST00000416319 PRSS47A8MTI9 375 aa13.37□□□□□ -0.27
FAM3A-207ENST00000416319 TMEM262E9PQX1 116 aa13.37□□□□□ -0.27
FAM3A-207ENST00000416319 H7C423 109 aa13.37□□□□□ -0.27
FAM3A-207ENST00000416319 TCAPO15273 167 aa13.37□□□□□ -0.27
FAM3A-207ENST00000416319 YPEL4Q96NS1 127 aa13.37□□□□□ -0.27
FAM3A-207ENST00000416319 KIR2DL4Q99706 377 aa13.37□□□□□ -0.27
FAM3A-207ENST00000416319 TGIF2-C20orf24A0A0A6YYL0 155 aa13.36□□□□□ -0.27
FAM3A-207ENST00000416319 RTL8CO15255 209 aa13.36□□□□□ -0.27
FAM3A-207ENST00000416319 NFE4Q86UQ8 179 aa13.36□□□□□ -0.27
FAM3A-207ENST00000416319 Q8N3U1 123 aa13.36□□□□□ -0.27
FAM3A-207ENST00000416319 SMIM2Q9BVW6 85 aa13.36□□□□□ -0.27
FAM3A-207ENST00000416319 A0A1B0GUV1 79 aa13.35□□□□□ -0.27
FAM3A-207ENST00000416319 ESDP10768 282 aa13.35□□□□□ -0.27
FAM3A-207ENST00000416319 MPV17L2Q567V2 206 aa13.35□□□□□ -0.27
FAM3A-207ENST00000416319 LINC00336Q6ZUF6 198 aa13.35□□□□□ -0.27
FAM3A-207ENST00000416319 UBE2L6O14933 153 aa13.34□□□□□ -0.27
FAM3A-207ENST00000416319 GAGE6Q13070 117 aa13.34□□□□□ -0.27
FAM3A-207ENST00000416319 FCER1GP30273 86 aa13.33□□□□□ -0.28
FAM3A-207ENST00000416319 RBX1P62877 108 aa13.33□□□□□ -0.28
FAM3A-207ENST00000416319 DEFB104AQ8WTQ1 72 aa13.33□□□□□ -0.28
FAM3A-207ENST00000416319 TRAV8-3A0A0A6YYJ7 113 aa13.32□□□□□ -0.28
FAM3A-207ENST00000416319 CBLN2Q8IUK8 224 aa13.32□□□□□ -0.28
FAM3A-207ENST00000416319 MRPL18Q9H0U6 180 aaKnown RBP13.32□□□□□ -0.28
FAM3A-207ENST00000416319 MAP1LC3AQ9H492 121 aa13.32□□□□□ -0.28
FAM3A-207ENST00000416319 Q6ZRN7 208 aaPredicted RBP13.31□□□□□ -0.28
FAM3A-207ENST00000416319 KLK12Q9UKR0 248 aa13.31□□□□□ -0.28
FAM3A-207ENST00000416319 FABP9Q0Z7S8 132 aa13.3□□□□□ -0.28
FAM3A-207ENST00000416319 KIAA1644Q3SXP7 199 aa13.3□□□□□ -0.28
FAM3A-207ENST00000416319 Q8N976 141 aa13.3□□□□□ -0.28
FAM3A-207ENST00000416319 ZNF25P17030 456 aaPredicted RBP13.29□□□□□ -0.28
FAM3A-207ENST00000416319 Q0VG73 95 aa13.29□□□□□ -0.28
FAM3A-207ENST00000416319 Q8N8P6 123 aa13.29□□□□□ -0.28
FAM3A-207ENST00000416319 ALKBH7Q9BT30 221 aaPredicted RBP13.29□□□□□ -0.28
FAM3A-207ENST00000416319 PRR34Q9NV39 138 aa13.29□□□□□ -0.28
FAM3A-207ENST00000416319 TRAPPC1Q9Y5R8 145 aa13.29□□□□□ -0.28
FAM3A-207ENST00000416319 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.28□□□□□ -0.28
FAM3A-207ENST00000416319 IGKV2-29A2NJV5 120 aaPredicted RBP13.28□□□□□ -0.28
FAM3A-207ENST00000416319 K7EMI3 77 aa13.28□□□□□ -0.28
FAM3A-207ENST00000416319 ANGP03950 147 aaKnown RBP13.28□□□□□ -0.28
FAM3A-207ENST00000416319 FGF6P10767 208 aa13.28□□□□□ -0.28
FAM3A-207ENST00000416319 MRPL52Q86TS9 123 aaKnown RBP13.28□□□□□ -0.28
FAM3A-207ENST00000416319 C20orf203Q8NBC4 194 aa13.28□□□□□ -0.28
FAM3A-207ENST00000416319 RAB5AP20339 215 aa13.27□□□□□ -0.29
FAM3A-207ENST00000416319 SMAGPQ0VAQ4 97 aa13.27□□□□□ -0.29
FAM3A-207ENST00000416319 AMMECR1LQ6DCA0 310 aa13.27□□□□□ -0.29
FAM3A-207ENST00000416319 TMEM18Q96B42 140 aa13.27□□□□□ -0.29
FAM3A-207ENST00000416319 NXT2Q9NPJ8 142 aaKnown RBP13.27□□□□□ -0.29
FAM3A-207ENST00000416319 LOC389332A0A1B0GUA5 103 aa13.26□□□□□ -0.29
FAM3A-207ENST00000416319 PRSS29PA6NIE9 313 aa13.26□□□□□ -0.29
FAM3A-207ENST00000416319 UBE2WQ96B02 151 aa13.26□□□□□ -0.29
FAM3A-207ENST00000416319 RMI2Q96E14 147 aa13.26□□□□□ -0.29
FAM3A-207ENST00000416319 TM2D2Q9BX73 214 aa13.26□□□□□ -0.29
FAM3A-207ENST00000416319 Q9HAA7 133 aa13.26□□□□□ -0.29
FAM3A-207ENST00000416319 COX11Q9Y6N1 276 aa13.26□□□□□ -0.29
FAM3A-207ENST00000416319 HECTD4Q9Y4D8 3996 aa13.25□□□□□ -0.29
FAM3A-207ENST00000416319 IGLV4-60A0A075B6I1 120 aa13.25□□□□□ -0.29
FAM3A-207ENST00000416319 CRPP02741 224 aa13.25□□□□□ -0.29
FAM3A-207ENST00000416319 MIAQ16674 131 aa13.25□□□□□ -0.29
FAM3A-207ENST00000416319 ENHOQ6UWT2 76 aa13.25□□□□□ -0.29
FAM3A-207ENST00000416319 LINC00269Q8N2A0 174 aa13.25□□□□□ -0.29
FAM3A-207ENST00000416319 CSDC2Q9Y534 153 aaKnown RBP13.25□□□□□ -0.29
FAM3A-207ENST00000416319 TMEM101Q96IK0 257 aa13.24□□□□□ -0.29
FAM3A-207ENST00000416319 TIMM21Q9BVV7 248 aa13.24□□□□□ -0.29
FAM3A-207ENST00000416319 DNAH11Q96DT5 4516 aa13.24□□□□□ -0.29
FAM3A-207ENST00000416319 EPPK1P58107 5090 aaKnown RBP13.23□□□□□ -0.29
FAM3A-207ENST00000416319 RNASEKQ6P5S7 137 aaKnown RBP13.23□□□□□ -0.29
FAM3A-207ENST00000416319 IFI27P40305 119 aaPredicted RBP13.22□□□□□ -0.29
FAM3A-207ENST00000416319 TNP2Q05952 138 aa13.22□□□□□ -0.29
FAM3A-207ENST00000416319 REG3AQ06141 175 aa13.22□□□□□ -0.29
FAM3A-207ENST00000416319 ORMDL2Q53FV1 153 aa13.22□□□□□ -0.29
FAM3A-207ENST00000416319 OR5A1Q8NGJ0 315 aa13.22□□□□□ -0.29
FAM3A-207ENST00000416319 UBE2D4Q9Y2X8 147 aa13.22□□□□□ -0.29
FAM3A-207ENST00000416319 PKD1P98161 4303 aa13.21□□□□□ -0.29
FAM3A-207ENST00000416319 LINC01546A6NGU7 62 aa13.21□□□□□ -0.29
FAM3A-207ENST00000416319 TRAV8-4A0A0B4J246 113 aa13.2□□□□□ -0.3
FAM3A-207ENST00000416319 COLCA2A8K830 154 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms