RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 TMEM238LA0A1B0GVL6 79 aa3.4□□□□□ -1.87
LMBR1-204ENST00000415428 C19orf71A6NCJ1 209 aa3.4□□□□□ -1.87
LMBR1-204ENST00000415428 FAAP20Q6NZ36 180 aa3.4□□□□□ -1.87
LMBR1-204ENST00000415428 KRTAP19-1Q8IUB9 90 aa3.4□□□□□ -1.87
LMBR1-204ENST00000415428 FCGBPQ9Y6R7 5405 aaPredicted RBP3.4□□□□□ -1.87
LMBR1-204ENST00000415428 SH2D1AO60880 128 aa3.39□□□□□ -1.87
LMBR1-204ENST00000415428 GCGP01275 180 aa3.39□□□□□ -1.87
LMBR1-204ENST00000415428 NIT2Q9NQR4 276 aa3.39□□□□□ -1.87
LMBR1-204ENST00000415428 IGLV7-46A0A075B6I9 117 aa3.39□□□□□ -1.87
LMBR1-204ENST00000415428 CXorf1O96002 111 aa3.39□□□□□ -1.87
LMBR1-204ENST00000415428 HLA-DQA1P01909 254 aa3.39□□□□□ -1.87
LMBR1-204ENST00000415428 FOXA3P55318 350 aaPredicted RBP3.39□□□□□ -1.87
LMBR1-204ENST00000415428 FAM104AQ969W3 186 aa3.39□□□□□ -1.87
LMBR1-204ENST00000415428 KRTAP9-3Q9BYQ3 159 aa3.39□□□□□ -1.87
LMBR1-204ENST00000415428 CDC42SE2Q9NRR3 84 aa3.39□□□□□ -1.87
LMBR1-204ENST00000415428 LINC00846Q9NV44 126 aa3.39□□□□□ -1.87
LMBR1-204ENST00000415428 A0A1B0GVG6 124 aa3.39□□□□□ -1.87
LMBR1-204ENST00000415428 B4DEV8 164 aa3.39□□□□□ -1.87
LMBR1-204ENST00000415428 RRAS2P62070 204 aaPredicted RBP3.39□□□□□ -1.87
LMBR1-204ENST00000415428 GOLT1AQ6ZVE7 132 aa3.39□□□□□ -1.87
LMBR1-204ENST00000415428 DERL1Q9BUN8 251 aa3.39□□□□□ -1.87
LMBR1-204ENST00000415428 A0A087X002 238 aa3.38□□□□□ -1.87
LMBR1-204ENST00000415428 F2Z2F3 143 aa3.38□□□□□ -1.87
LMBR1-204ENST00000415428 TPT1P13693 172 aaKnown RBP3.38□□□□□ -1.87
LMBR1-204ENST00000415428 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
LMBR1-204ENST00000415428 GCHFRP30047 84 aa3.38□□□□□ -1.87
LMBR1-204ENST00000415428 KIAA0087Q14695 138 aa3.38□□□□□ -1.87
LMBR1-204ENST00000415428 SS18Q15532 418 aa3.38□□□□□ -1.87
LMBR1-204ENST00000415428 ZFP69Q49AA0 526 aa3.38□□□□□ -1.87
LMBR1-204ENST00000415428 RASL11AQ6T310 242 aa3.38□□□□□ -1.87
LMBR1-204ENST00000415428 FAM19A2Q8N3H0 131 aa3.38□□□□□ -1.87
LMBR1-204ENST00000415428 GATD1Q8NB37 220 aa3.38□□□□□ -1.87
LMBR1-204ENST00000415428 VCX3AQ9NNX9 186 aa3.38□□□□□ -1.87
LMBR1-204ENST00000415428 TNFSF18Q9UNG2 199 aa3.38□□□□□ -1.87
LMBR1-204ENST00000415428 UBE2L5PA0A1B0GUS4 154 aa3.38□□□□□ -1.87
LMBR1-204ENST00000415428 FAM25AB3EWG3 89 aa3.38□□□□□ -1.87
LMBR1-204ENST00000415428 FAM25CB3EWG5 89 aa3.38□□□□□ -1.87
LMBR1-204ENST00000415428 FAM25GB3EWG6 89 aa3.38□□□□□ -1.87
LMBR1-204ENST00000415428 GCSAMLQ5JQS6 135 aa3.38□□□□□ -1.87
LMBR1-204ENST00000415428 PHLDA3Q9Y5J5 127 aa3.38□□□□□ -1.87
LMBR1-204ENST00000415428 JPT2Q9H910 190 aa3.38□□□□□ -1.87
LMBR1-204ENST00000415428 TRBV27A0A0K0K1C4 114 aa3.37□□□□□ -1.87
LMBR1-204ENST00000415428 PRSS47A8MTI9 375 aa3.37□□□□□ -1.87
LMBR1-204ENST00000415428 TCAPO15273 167 aa3.37□□□□□ -1.87
LMBR1-204ENST00000415428 HMGB3O15347 200 aaKnown RBP3.37□□□□□ -1.87
LMBR1-204ENST00000415428 BCL2P10415 239 aa3.37□□□□□ -1.87
LMBR1-204ENST00000415428 UBE2D1P51668 147 aa3.37□□□□□ -1.87
LMBR1-204ENST00000415428 CYCSP99999 105 aaKnown RBP3.37□□□□□ -1.87
LMBR1-204ENST00000415428 SMAGPQ0VAQ4 97 aa3.37□□□□□ -1.87
LMBR1-204ENST00000415428 PRR4Q16378 134 aa3.37□□□□□ -1.87
LMBR1-204ENST00000415428 C1orf137Q5JT78 98 aa3.37□□□□□ -1.87
LMBR1-204ENST00000415428 MZT2BQ6NZ67 158 aa3.37□□□□□ -1.87
LMBR1-204ENST00000415428 F6UZH7 168 aa3.37□□□□□ -1.87
LMBR1-204ENST00000415428 H3BP45 60 aa3.37□□□□□ -1.87
LMBR1-204ENST00000415428 LGALSLQ3ZCW2 172 aaPredicted RBP3.37□□□□□ -1.87
LMBR1-204ENST00000415428 C9orf116Q5BN46 136 aaPredicted RBP3.37□□□□□ -1.87
LMBR1-204ENST00000415428 TEX261Q6UWH6 196 aa3.37□□□□□ -1.87
LMBR1-204ENST00000415428 TOMM5Q8N4H5 51 aa3.37□□□□□ -1.87
LMBR1-204ENST00000415428 LINC00304Q8N9R0 145 aa3.37□□□□□ -1.87
LMBR1-204ENST00000415428 CMTM2Q8TAZ6 248 aa3.37□□□□□ -1.87
LMBR1-204ENST00000415428 AP1S3Q96PC3 154 aa3.37□□□□□ -1.87
LMBR1-204ENST00000415428 IMMP2LQ96T52 175 aa3.37□□□□□ -1.87
LMBR1-204ENST00000415428 H3BTX0 84 aa3.36□□□□□ -1.87
LMBR1-204ENST00000415428 PEX7O00628 323 aa3.36□□□□□ -1.87
LMBR1-204ENST00000415428 BCL2L11O43521 198 aa3.36□□□□□ -1.87
LMBR1-204ENST00000415428 EIF3GO75821 320 aaKnown RBP eCLIP3.36□□□□□ -1.87
LMBR1-204ENST00000415428 GTSF1Q8WW33 167 aa3.36□□□□□ -1.87
LMBR1-204ENST00000415428 FAM74A7A6NL05 159 aa3.36□□□□□ -1.87
LMBR1-204ENST00000415428 PPP1R2P9O14990 202 aa3.36□□□□□ -1.87
LMBR1-204ENST00000415428 ATP6V1G2O95670 118 aa3.36□□□□□ -1.87
LMBR1-204ENST00000415428 SUMO4Q6EEV6 95 aa3.36□□□□□ -1.87
LMBR1-204ENST00000415428 Q8N377 158 aa3.36□□□□□ -1.87
LMBR1-204ENST00000415428 PACRGQ96M98 296 aaPredicted RBP3.36□□□□□ -1.87
LMBR1-204ENST00000415428 LBHQ53QV2 105 aaPredicted RBP3.36□□□□□ -1.87
LMBR1-204ENST00000415428 A0A087WWL8 130 aa3.35□□□□□ -1.87
LMBR1-204ENST00000415428 RAB19A4D1S5 217 aa3.35□□□□□ -1.87
LMBR1-204ENST00000415428 H0YIZ8 118 aa3.35□□□□□ -1.87
LMBR1-204ENST00000415428 L7N2F9 121 aa3.35□□□□□ -1.87
LMBR1-204ENST00000415428 SPINK1P00995 79 aa3.35□□□□□ -1.87
LMBR1-204ENST00000415428 RANP62826 216 aaKnown RBP3.35□□□□□ -1.87
LMBR1-204ENST00000415428 VAMP2P63027 116 aa3.35□□□□□ -1.87
LMBR1-204ENST00000415428 PPDPFQ9H3Y8 114 aa3.35□□□□□ -1.87
LMBR1-204ENST00000415428 RPL28P46779 137 aaKnown RBP3.35□□□□□ -1.87
LMBR1-204ENST00000415428 POLR2KP53803 58 aaKnown RBP3.35□□□□□ -1.87
LMBR1-204ENST00000415428 PHF5AQ7RTV0 110 aaKnown RBP3.35□□□□□ -1.87
LMBR1-204ENST00000415428 J3KRW8 73 aa3.34□□□□□ -1.87
LMBR1-204ENST00000415428 LINC00173Q6ZV60 143 aa3.34□□□□□ -1.87
LMBR1-204ENST00000415428 SGK494Q96LW2 274 aa3.34□□□□□ -1.87
LMBR1-204ENST00000415428 KIR2DL4Q99706 377 aa3.34□□□□□ -1.87
LMBR1-204ENST00000415428 RETNLBQ9BQ08 111 aa3.34□□□□□ -1.87
LMBR1-204ENST00000415428 CHCHD5Q9BSY4 110 aa3.34□□□□□ -1.87
LMBR1-204ENST00000415428 IGHV3OR16-9A0A0B4J2B5 98 aa3.34□□□□□ -1.88
LMBR1-204ENST00000415428 H3BVH4 76 aa3.34□□□□□ -1.88
LMBR1-204ENST00000415428 NEDD8Q15843 81 aa3.34□□□□□ -1.88
LMBR1-204ENST00000415428 C9orf129Q5T035 196 aaKnown RBP3.34□□□□□ -1.88
LMBR1-204ENST00000415428 SVIPQ8NHG7 77 aa3.34□□□□□ -1.88
LMBR1-204ENST00000415428 MBD3L1Q8WWY6 194 aa3.34□□□□□ -1.88
LMBR1-204ENST00000415428 NDUFC2-KCTD14E9PQ53 114 aa3.33□□□□□ -1.88
LMBR1-204ENST00000415428 NTF3P20783 257 aa3.33□□□□□ -1.88
LMBR1-204ENST00000415428 TYMSOSQ8TAI1 123 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 204.2 ms