RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 KRTAP10-1P60331 282 aa5.67□□□□□ -1.5
HERPUD2-203ENST00000413517 RPS20P60866 119 aaKnown RBP5.67□□□□□ -1.5
HERPUD2-203ENST00000413517 RPL36AP83881 106 aaKnown RBP5.67□□□□□ -1.5
HERPUD2-203ENST00000413517 LAGE3Q14657 143 aa5.67□□□□□ -1.5
HERPUD2-203ENST00000413517 NTM-AS1Q6ZSK4 140 aa5.67□□□□□ -1.5
HERPUD2-203ENST00000413517 GTSF1Q8WW33 167 aa5.67□□□□□ -1.5
HERPUD2-203ENST00000413517 RPL36ALQ969Q0 106 aaKnown RBP5.67□□□□□ -1.5
HERPUD2-203ENST00000413517 DNAH5Q8TE73 4624 aa5.67□□□□□ -1.5
HERPUD2-203ENST00000413517 RYR1P21817 5038 aa5.66□□□□□ -1.5
HERPUD2-203ENST00000413517 H0Y8G0 127 aa5.66□□□□□ -1.5
HERPUD2-203ENST00000413517 M0QY20 66 aa5.66□□□□□ -1.5
HERPUD2-203ENST00000413517 MGPP08493 103 aa5.66□□□□□ -1.5
HERPUD2-203ENST00000413517 NTF3P20783 257 aa5.66□□□□□ -1.5
HERPUD2-203ENST00000413517 RPP21Q9H633 154 aaKnown RBP5.66□□□□□ -1.5
HERPUD2-203ENST00000413517 APOBP04114 4563 aaKnown RBP5.65□□□□□ -1.5
HERPUD2-203ENST00000413517 TRBV6-8A0A0A6YYG3 113 aa5.65□□□□□ -1.5
HERPUD2-203ENST00000413517 SRP19P09132 144 aaKnown RBP5.65□□□□□ -1.5
HERPUD2-203ENST00000413517 CEBPGP53567 150 aa5.65□□□□□ -1.5
HERPUD2-203ENST00000413517 CACNG7P62955 275 aa5.65□□□□□ -1.5
HERPUD2-203ENST00000413517 HERV-K104P63124 156 aa5.65□□□□□ -1.5
HERPUD2-203ENST00000413517 ERASQ7Z444 233 aa5.65□□□□□ -1.5
HERPUD2-203ENST00000413517 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.65□□□□□ -1.5
HERPUD2-203ENST00000413517 ALKBH7Q9BT30 221 aaPredicted RBP5.65□□□□□ -1.5
HERPUD2-203ENST00000413517 CNFNQ9BYD5 112 aa5.65□□□□□ -1.5
HERPUD2-203ENST00000413517 KLK12Q9UKR0 248 aa5.65□□□□□ -1.5
HERPUD2-203ENST00000413517 C9JQL5 133 aa5.64□□□□□ -1.51
HERPUD2-203ENST00000413517 F2Z2F3 143 aa5.64□□□□□ -1.51
HERPUD2-203ENST00000413517 LECT2O14960 151 aa5.64□□□□□ -1.51
HERPUD2-203ENST00000413517 PSCAO43653 123 aa5.64□□□□□ -1.51
HERPUD2-203ENST00000413517 FOXA3P55318 350 aaPredicted RBP5.64□□□□□ -1.51
HERPUD2-203ENST00000413517 XGP55808 180 aa5.64□□□□□ -1.51
HERPUD2-203ENST00000413517 MPV17L2Q567V2 206 aa5.64□□□□□ -1.51
HERPUD2-203ENST00000413517 LINC01551Q86U37 167 aa5.64□□□□□ -1.51
HERPUD2-203ENST00000413517 LINC00518Q8N0U6 118 aa5.64□□□□□ -1.51
HERPUD2-203ENST00000413517 DEFB104AQ8WTQ1 72 aa5.64□□□□□ -1.51
HERPUD2-203ENST00000413517 SMIM7Q9BQ49 75 aa5.64□□□□□ -1.51
HERPUD2-203ENST00000413517 BIN3Q9NQY0 253 aa5.64□□□□□ -1.51
HERPUD2-203ENST00000413517 TRAV8-3A0A0A6YYJ7 113 aa5.63□□□□□ -1.51
HERPUD2-203ENST00000413517 SMIM17P0DL12 118 aa5.63□□□□□ -1.51
HERPUD2-203ENST00000413517 ATRAIDQ6UW56 229 aa5.63□□□□□ -1.51
HERPUD2-203ENST00000413517 ENHOQ6UWT2 76 aa5.63□□□□□ -1.51
HERPUD2-203ENST00000413517 FAM231DQ6ZW35 169 aa5.63□□□□□ -1.51
HERPUD2-203ENST00000413517 Q8N814 137 aa5.63□□□□□ -1.51
HERPUD2-203ENST00000413517 Q8N976 141 aa5.63□□□□□ -1.51
HERPUD2-203ENST00000413517 EIF5A2Q9GZV4 153 aaKnown RBP5.63□□□□□ -1.51
HERPUD2-203ENST00000413517 DPH3P1Q9H4G8 78 aa5.63□□□□□ -1.51
HERPUD2-203ENST00000413517 PCLOQ9Y6V0 5065 aa5.62□□□□□ -1.51
HERPUD2-203ENST00000413517 TRAV26-2A0A0B4J265 109 aa5.62□□□□□ -1.51
HERPUD2-203ENST00000413517 GATCO43716 136 aaKnown RBP5.62□□□□□ -1.51
HERPUD2-203ENST00000413517 NDUFS6O75380 124 aaKnown RBP5.62□□□□□ -1.51
HERPUD2-203ENST00000413517 TRGC1P0CF51 173 aa5.62□□□□□ -1.51
HERPUD2-203ENST00000413517 HAMPP81172 84 aa5.62□□□□□ -1.51
HERPUD2-203ENST00000413517 RASL11AQ6T310 242 aa5.62□□□□□ -1.51
HERPUD2-203ENST00000413517 Q8N1X5 172 aa5.62□□□□□ -1.51
HERPUD2-203ENST00000413517 GATD1Q8NB37 220 aa5.62□□□□□ -1.51
HERPUD2-203ENST00000413517 BAALCQ8WXS3 180 aa5.62□□□□□ -1.51
HERPUD2-203ENST00000413517 UBE2WQ96B02 151 aa5.62□□□□□ -1.51
HERPUD2-203ENST00000413517 PGLYRP4Q96LB8 373 aa5.62□□□□□ -1.51
HERPUD2-203ENST00000413517 CHCHD5Q9BSY4 110 aa5.62□□□□□ -1.51
HERPUD2-203ENST00000413517 CHCHD7Q9BUK0 85 aa5.62□□□□□ -1.51
HERPUD2-203ENST00000413517 URGCP-MRPS24S4R325 110 aa5.62□□□□□ -1.51
HERPUD2-203ENST00000413517 FLG2Q5D862 2391 aaPredicted RBP5.62□□□□□ -1.51
HERPUD2-203ENST00000413517 IGKV2D-24A0A075B6R9 120 aa5.61□□□□□ -1.51
HERPUD2-203ENST00000413517 A0A087WX48 190 aa5.61□□□□□ -1.51
HERPUD2-203ENST00000413517 IGLV5-52A0A0A0MRZ9 124 aa5.61□□□□□ -1.51
HERPUD2-203ENST00000413517 ZNF727A8MUV8 499 aa5.61□□□□□ -1.51
HERPUD2-203ENST00000413517 A8MWL6 223 aa5.61□□□□□ -1.51
HERPUD2-203ENST00000413517 GAS8-AS1O95177 125 aa5.61□□□□□ -1.51
HERPUD2-203ENST00000413517 S100A6P06703 90 aa5.61□□□□□ -1.51
HERPUD2-203ENST00000413517 RBX1P62877 108 aa5.61□□□□□ -1.51
HERPUD2-203ENST00000413517 GAGE6Q13070 117 aa5.61□□□□□ -1.51
HERPUD2-203ENST00000413517 TWIST1Q15672 202 aa5.61□□□□□ -1.51
HERPUD2-203ENST00000413517 IQCJQ1A5X6 159 aa5.61□□□□□ -1.51
HERPUD2-203ENST00000413517 KRTAP26-1Q6PEX3 210 aa5.61□□□□□ -1.51
HERPUD2-203ENST00000413517 C15orf54Q8N8G6 183 aa5.61□□□□□ -1.51
HERPUD2-203ENST00000413517 RPL39LQ96EH5 51 aaKnown RBP5.61□□□□□ -1.51
HERPUD2-203ENST00000413517 GFRA4Q9GZZ7 299 aa5.61□□□□□ -1.51
HERPUD2-203ENST00000413517 SRRM2Q9UQ35 2752 aaKnown RBP5.61□□□□□ -1.51
HERPUD2-203ENST00000413517 TMEM262E9PQX1 116 aa5.6□□□□□ -1.51
HERPUD2-203ENST00000413517 H7C1H1 209 aa5.6□□□□□ -1.51
HERPUD2-203ENST00000413517 SCO1O75880 301 aa5.6□□□□□ -1.51
HERPUD2-203ENST00000413517 LINC01620Q4KN68 170 aa5.6□□□□□ -1.51
HERPUD2-203ENST00000413517 CLPSL2Q6UWE3 100 aa5.6□□□□□ -1.51
HERPUD2-203ENST00000413517 LINC00469Q8N7U9 141 aa5.6□□□□□ -1.51
HERPUD2-203ENST00000413517 NTN5Q8WTR8 489 aaPredicted RBP5.6□□□□□ -1.51
HERPUD2-203ENST00000413517 NIT2Q9NQR4 276 aa5.6□□□□□ -1.51
HERPUD2-203ENST00000413517 OSTCQ9NRP0 149 aa5.6□□□□□ -1.51
HERPUD2-203ENST00000413517 V9GYV3 84 aa5.6□□□□□ -1.51
HERPUD2-203ENST00000413517 IGLV4-60A0A075B6I1 120 aa5.59□□□□□ -1.51
HERPUD2-203ENST00000413517 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.59□□□□□ -1.51
HERPUD2-203ENST00000413517 TRBV25-1A0A075B6N4 114 aa5.59□□□□□ -1.51
HERPUD2-203ENST00000413517 IGHV1-24A0A0C4DH33 117 aa5.59□□□□□ -1.51
HERPUD2-203ENST00000413517 HIGD1CA8MV81 97 aa5.59□□□□□ -1.51
HERPUD2-203ENST00000413517 ANGP03950 147 aaKnown RBP5.59□□□□□ -1.51
HERPUD2-203ENST00000413517 RPL23P62829 140 aaKnown RBP5.59□□□□□ -1.51
HERPUD2-203ENST00000413517 C20orf203Q8NBC4 194 aa5.59□□□□□ -1.51
HERPUD2-203ENST00000413517 TSKUQ8WUA8 353 aa5.59□□□□□ -1.51
HERPUD2-203ENST00000413517 ISOC2Q96AB3 205 aa5.59□□□□□ -1.51
HERPUD2-203ENST00000413517 KRTAP9-2Q9BYQ4 174 aa5.59□□□□□ -1.51
HERPUD2-203ENST00000413517 PRR34Q9NV39 138 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms