RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 SYNJ2BPP57105 145 aa9.7□□□□□ -0.86
LITAF-203ENST00000413364 TMEM86BQ8N661 226 aa9.7□□□□□ -0.86
LITAF-203ENST00000413364 IGHV4-4A0A075B6R2 117 aa9.7□□□□□ -0.86
LITAF-203ENST00000413364 COX7CP15954 63 aa9.7□□□□□ -0.86
LITAF-203ENST00000413364 MALP21145 153 aa9.7□□□□□ -0.86
LITAF-203ENST00000413364 HOXD3P31249 432 aaPredicted RBP9.7□□□□□ -0.86
LITAF-203ENST00000413364 TMEM258P61165 79 aa9.7□□□□□ -0.86
LITAF-203ENST00000413364 SMKR1H3BMG3 65 aa9.69□□□□□ -0.86
LITAF-203ENST00000413364 P0DMU3 169 aa9.68□□□□□ -0.86
LITAF-203ENST00000413364 FAM231AP0DMU4 169 aa9.68□□□□□ -0.86
LITAF-203ENST00000413364 FAM231CP0DMU5 169 aa9.68□□□□□ -0.86
LITAF-203ENST00000413364 ATXN8Q156A1 80 aa9.68□□□□□ -0.86
LITAF-203ENST00000413364 PRO1854Q9UHT4 67 aa9.68□□□□□ -0.86
LITAF-203ENST00000413364 DOPEY2Q9Y3R5 2298 aa9.68□□□□□ -0.86
LITAF-203ENST00000413364 RNASE4P34096 147 aaKnown RBP9.68□□□□□ -0.86
LITAF-203ENST00000413364 TMEM170BQ5T4T1 132 aa9.68□□□□□ -0.86
LITAF-203ENST00000413364 SCGB1D4Q6XE38 83 aa9.68□□□□□ -0.86
LITAF-203ENST00000413364 DPH3Q96FX2 82 aa9.68□□□□□ -0.86
LITAF-203ENST00000413364 TEX15Q9BXT5 2789 aa9.67□□□□□ -0.86
LITAF-203ENST00000413364 TEX49A0A1B0GTD5 131 aa9.67□□□□□ -0.86
LITAF-203ENST00000413364 TRACP01848 142 aa9.67□□□□□ -0.86
LITAF-203ENST00000413364 ACYP1P07311 99 aa9.67□□□□□ -0.86
LITAF-203ENST00000413364 SEC61GP60059 68 aa9.67□□□□□ -0.86
LITAF-203ENST00000413364 TENM4Q6N022 2769 aa9.67□□□□□ -0.86
LITAF-203ENST00000413364 TRAV12-1A0A0B4J245 112 aa9.67□□□□□ -0.86
LITAF-203ENST00000413364 TRBV10-2A0A0K0K1G8 114 aa9.67□□□□□ -0.86
LITAF-203ENST00000413364 H7C1H1 209 aa9.67□□□□□ -0.86
LITAF-203ENST00000413364 K7EQG2 157 aa9.67□□□□□ -0.86
LITAF-203ENST00000413364 SPANXN1Q5VSR9 72 aa9.67□□□□□ -0.86
LITAF-203ENST00000413364 KLK5Q9Y337 293 aaPredicted RBP9.67□□□□□ -0.86
LITAF-203ENST00000413364 MXRA5Q9NR99 2828 aa9.67□□□□□ -0.86
LITAF-203ENST00000413364 KLLNB2CW77 178 aa9.66□□□□□ -0.86
LITAF-203ENST00000413364 F8VRH5 84 aa9.66□□□□□ -0.86
LITAF-203ENST00000413364 HRCT1Q6UXD1 115 aa9.66□□□□□ -0.86
LITAF-203ENST00000413364 ZNF256Q9Y2P7 627 aaPredicted RBP9.66□□□□□ -0.86
LITAF-203ENST00000413364 MED14OSP0DP75 135 aa9.66□□□□□ -0.86
LITAF-203ENST00000413364 SNRPD3P62318 126 aaKnown RBP9.66□□□□□ -0.86
LITAF-203ENST00000413364 C4orf26Q17RF5 130 aa9.66□□□□□ -0.86
LITAF-203ENST00000413364 LINC01620Q4KN68 170 aa9.66□□□□□ -0.86
LITAF-203ENST00000413364 ITPR3Q14573 2671 aa9.65□□□□□ -0.86
LITAF-203ENST00000413364 GAS8-AS1O95177 125 aa9.65□□□□□ -0.86
LITAF-203ENST00000413364 C18orf65Q6ZTR6 163 aa9.65□□□□□ -0.86
LITAF-203ENST00000413364 ZNF815PA8K554 130 aa9.65□□□□□ -0.87
LITAF-203ENST00000413364 CFC1BP0CG36 223 aa9.65□□□□□ -0.87
LITAF-203ENST00000413364 CFC1P0CG37 223 aa9.65□□□□□ -0.87
LITAF-203ENST00000413364 DEFB121Q5J5C9 76 aa9.65□□□□□ -0.87
LITAF-203ENST00000413364 Q5XG85 94 aa9.65□□□□□ -0.87
LITAF-203ENST00000413364 DNAJC9-AS1A6NH13 148 aa9.64□□□□□ -0.87
LITAF-203ENST00000413364 S100A4P26447 101 aaKnown RBP9.64□□□□□ -0.87
LITAF-203ENST00000413364 Q8N8P6 123 aa9.64□□□□□ -0.87
LITAF-203ENST00000413364 C4orf3Q8WVX3 66 aa9.64□□□□□ -0.87
LITAF-203ENST00000413364 A0A0J9YX75 114 aa9.63□□□□□ -0.87
LITAF-203ENST00000413364 TINCRA0A1B0GVN0 87 aa9.63□□□□□ -0.87
LITAF-203ENST00000413364 SLURP1P55000 103 aa9.63□□□□□ -0.87
LITAF-203ENST00000413364 DEFB136Q30KP8 78 aa9.63□□□□□ -0.87
LITAF-203ENST00000413364 H3BT86 120 aa9.63□□□□□ -0.87
LITAF-203ENST00000413364 RS1O15537 224 aa9.63□□□□□ -0.87
LITAF-203ENST00000413364 GATA1P15976 413 aaPredicted RBP9.63□□□□□ -0.87
LITAF-203ENST00000413364 CXCL5P42830 114 aa9.63□□□□□ -0.87
LITAF-203ENST00000413364 KRTAP1-1Q07627 177 aa9.63□□□□□ -0.87
LITAF-203ENST00000413364 Q6ZSV7 163 aa9.63□□□□□ -0.87
LITAF-203ENST00000413364 GNRH2O43555 120 aa9.62□□□□□ -0.87
LITAF-203ENST00000413364 JPT2Q9H910 190 aa9.62□□□□□ -0.87
LITAF-203ENST00000413364 M0R381 172 aa9.62□□□□□ -0.87
LITAF-203ENST00000413364 PHLDA3Q9Y5J5 127 aa9.62□□□□□ -0.87
LITAF-203ENST00000413364 RNASE3P12724 160 aaKnown RBP9.61□□□□□ -0.87
LITAF-203ENST00000413364 NRACQ8N912 160 aa9.61□□□□□ -0.87
LITAF-203ENST00000413364 HELZ2Q9BYK8 2649 aaKnown RBP9.61□□□□□ -0.87
LITAF-203ENST00000413364 ATOX1O00244 68 aa9.61□□□□□ -0.87
LITAF-203ENST00000413364 KHDC1LQ5JSQ8 128 aa9.61□□□□□ -0.87
LITAF-203ENST00000413364 PEMTQ9UBM1 199 aa9.61□□□□□ -0.87
LITAF-203ENST00000413364 TRAV26-2A0A0B4J265 109 aa9.6□□□□□ -0.87
LITAF-203ENST00000413364 SPRY2O43597 315 aa9.6□□□□□ -0.87
LITAF-203ENST00000413364 NXPH4O95158 308 aa9.6□□□□□ -0.87
LITAF-203ENST00000413364 LAGE3Q14657 143 aa9.6□□□□□ -0.87
LITAF-203ENST00000413364 C2orf82Q6UX34 121 aa9.6□□□□□ -0.87
LITAF-203ENST00000413364 LINC00643Q86TS7 51 aa9.6□□□□□ -0.87
LITAF-203ENST00000413364 C1orf43Q9BWL3 253 aa9.6□□□□□ -0.87
LITAF-203ENST00000413364 ESM1Q9NQ30 184 aa9.6□□□□□ -0.87
LITAF-203ENST00000413364 TLN2Q9Y4G6 2542 aa9.6□□□□□ -0.87
LITAF-203ENST00000413364 CCDC168Q8NDH2 2452 aa9.6□□□□□ -0.87
LITAF-203ENST00000413364 IGLV2-18A0A075B6J9 118 aa9.59□□□□□ -0.87
LITAF-203ENST00000413364 TRAV12-3A0A0B4J271 114 aa9.59□□□□□ -0.87
LITAF-203ENST00000413364 IGHV3-30P01768 117 aa9.59□□□□□ -0.87
LITAF-203ENST00000413364 IGHV3-30-5P0DP03 117 aa9.59□□□□□ -0.87
LITAF-203ENST00000413364 HERVK_113P61574 105 aa9.59□□□□□ -0.87
LITAF-203ENST00000413364 CEMP1Q6PRD7 247 aaPredicted RBP9.59□□□□□ -0.87
LITAF-203ENST00000413364 KLHL30-AS1Q8NEE0 82 aa9.59□□□□□ -0.87
LITAF-203ENST00000413364 DPH3P1Q9H4G8 78 aa9.59□□□□□ -0.87
LITAF-203ENST00000413364 C2orf48Q96LS8 159 aa9.59□□□□□ -0.87
LITAF-203ENST00000413364 V9GYY9 64 aa9.59□□□□□ -0.87
LITAF-203ENST00000413364 PDZD2O15018 2839 aa9.58□□□□□ -0.88
LITAF-203ENST00000413364 IGKV3-20P01619 116 aa9.58□□□□□ -0.88
LITAF-203ENST00000413364 FLNAP21333 2647 aaKnown RBP9.58□□□□□ -0.88
LITAF-203ENST00000413364 A0A0B4J2C4 111 aa9.58□□□□□ -0.88
LITAF-203ENST00000413364 A0A0J9YY99 117 aa9.58□□□□□ -0.88
LITAF-203ENST00000413364 ZNF415Q09FC8 603 aa9.58□□□□□ -0.88
LITAF-203ENST00000413364 C14orf178Q8N769 122 aaPredicted RBP9.58□□□□□ -0.88
LITAF-203ENST00000413364 IGHV3-33P01772 117 aa9.57□□□□□ -0.88
LITAF-203ENST00000413364 PLEKHB2Q96CS7 222 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms