RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 H7C423 109 aa10.72□□□□□ -0.69
DDR1-230ENST00000412274 AMTP48728 403 aa10.72□□□□□ -0.69
DDR1-230ENST00000412274 MAPKAPK5-AS1Q8N8E1 139 aa10.72□□□□□ -0.69
DDR1-230ENST00000412274 MRAP2Q96G30 205 aa10.72□□□□□ -0.69
DDR1-230ENST00000412274 TRAV8-4A0A0B4J246 113 aa10.71□□□□□ -0.69
DDR1-230ENST00000412274 TRAV26-2A0A0B4J265 109 aa10.71□□□□□ -0.69
DDR1-230ENST00000412274 Q8N1X5 172 aa10.71□□□□□ -0.69
DDR1-230ENST00000412274 NUP35Q8NFH5 326 aa10.71□□□□□ -0.69
DDR1-230ENST00000412274 BAALCQ8WXS3 180 aa10.71□□□□□ -0.69
DDR1-230ENST00000412274 TMEM70Q9BUB7 260 aa10.71□□□□□ -0.69
DDR1-230ENST00000412274 SRSF3P84103 164 aaKnown RBP10.7□□□□□ -0.7
DDR1-230ENST00000412274 LINC00269Q8N2A0 174 aa10.7□□□□□ -0.7
DDR1-230ENST00000412274 SMIM27A0A1W2PRY6 76 aa10.69□□□□□ -0.7
DDR1-230ENST00000412274 SDHAF1A6NFY7 115 aa10.69□□□□□ -0.7
DDR1-230ENST00000412274 I3L3M4 83 aa10.69□□□□□ -0.7
DDR1-230ENST00000412274 KRTAP10-1P60331 282 aa10.69□□□□□ -0.7
DDR1-230ENST00000412274 ST20Q9HBF5 79 aa10.69□□□□□ -0.7
DDR1-230ENST00000412274 HSPG2P98160 4391 aa10.68□□□□□ -0.7
DDR1-230ENST00000412274 PPP1R2P9O14990 202 aa10.68□□□□□ -0.7
DDR1-230ENST00000412274 S100A8P05109 93 aa10.68□□□□□ -0.7
DDR1-230ENST00000412274 RAB4AP20338 218 aa10.68□□□□□ -0.7
DDR1-230ENST00000412274 PMCHP20382 165 aa10.68□□□□□ -0.7
DDR1-230ENST00000412274 FUSP35637 526 aaKnown RBP eCLIP10.68□□□□□ -0.7
DDR1-230ENST00000412274 REG3AQ06141 175 aa10.68□□□□□ -0.7
DDR1-230ENST00000412274 RPL39LQ96EH5 51 aaKnown RBP10.68□□□□□ -0.7
DDR1-230ENST00000412274 APOBP04114 4563 aaKnown RBP10.67□□□□□ -0.7
DDR1-230ENST00000412274 LECT2O14960 151 aa10.67□□□□□ -0.7
DDR1-230ENST00000412274 APCSP02743 223 aa10.67□□□□□ -0.7
DDR1-230ENST00000412274 PNRC1Q12796 327 aaPredicted RBP10.67□□□□□ -0.7
DDR1-230ENST00000412274 WFDC2Q14508 124 aa10.67□□□□□ -0.7
DDR1-230ENST00000412274 LINC00862A6NCI5 91 aa10.66□□□□□ -0.7
DDR1-230ENST00000412274 ZNF25P17030 456 aaPredicted RBP10.66□□□□□ -0.7
DDR1-230ENST00000412274 XGP55808 180 aa10.66□□□□□ -0.7
DDR1-230ENST00000412274 C20orf203Q8NBC4 194 aa10.66□□□□□ -0.7
DDR1-230ENST00000412274 RNF185Q96GF1 192 aa10.66□□□□□ -0.7
DDR1-230ENST00000412274 TRBV27A0A0K0K1C4 114 aa10.65□□□□□ -0.7
DDR1-230ENST00000412274 AMMECR1LQ6DCA0 310 aa10.65□□□□□ -0.7
DDR1-230ENST00000412274 AMN1Q8IY45 258 aa10.65□□□□□ -0.7
DDR1-230ENST00000412274 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.64□□□□□ -0.71
DDR1-230ENST00000412274 F8W036 122 aa10.64□□□□□ -0.71
DDR1-230ENST00000412274 VCYO14598 125 aa10.64□□□□□ -0.71
DDR1-230ENST00000412274 POLR2KP53803 58 aaKnown RBP10.64□□□□□ -0.71
DDR1-230ENST00000412274 SMAGPQ0VAQ4 97 aa10.64□□□□□ -0.71
DDR1-230ENST00000412274 CLLU1Q5K131 121 aa10.64□□□□□ -0.71
DDR1-230ENST00000412274 CLRN3Q8NCR9 226 aa10.64□□□□□ -0.71
DDR1-230ENST00000412274 IGLV4-60A0A075B6I1 120 aa10.63□□□□□ -0.71
DDR1-230ENST00000412274 HLA-DQA1P01909 254 aa10.63□□□□□ -0.71
DDR1-230ENST00000412274 FAM104BQ5XKR9 115 aa10.63□□□□□ -0.71
DDR1-230ENST00000412274 DGAT2L7PQ6IED9 249 aa10.63□□□□□ -0.71
DDR1-230ENST00000412274 TMEM101Q96IK0 257 aa10.63□□□□□ -0.71
DDR1-230ENST00000412274 BTF3L4Q96K17 158 aa10.63□□□□□ -0.71
DDR1-230ENST00000412274 TCAPO15273 167 aa10.62□□□□□ -0.71
DDR1-230ENST00000412274 HBBP68871 147 aa10.62□□□□□ -0.71
DDR1-230ENST00000412274 CLPSL2Q6UWE3 100 aa10.62□□□□□ -0.71
DDR1-230ENST00000412274 ATP5L2Q7Z4Y8 100 aa10.62□□□□□ -0.71
DDR1-230ENST00000412274 ANAPC16Q96DE5 110 aa10.62□□□□□ -0.71
DDR1-230ENST00000412274 EPM2AB3EWF7 344 aa10.61□□□□□ -0.71
DDR1-230ENST00000412274 USP17L23D6RBM5 183 aa10.61□□□□□ -0.71
DDR1-230ENST00000412274 MT-ND4LP03901 98 aa10.61□□□□□ -0.71
DDR1-230ENST00000412274 ESDP10768 282 aa10.61□□□□□ -0.71
DDR1-230ENST00000412274 CAMPP49913 170 aa10.61□□□□□ -0.71
DDR1-230ENST00000412274 SUMO2P61956 95 aaKnown RBP10.61□□□□□ -0.71
DDR1-230ENST00000412274 RNASEKQ6P5S7 137 aaKnown RBP10.61□□□□□ -0.71
DDR1-230ENST00000412274 KRTAP26-1Q6PEX3 210 aa10.61□□□□□ -0.71
DDR1-230ENST00000412274 KIR2DL4Q99706 377 aa10.61□□□□□ -0.71
DDR1-230ENST00000412274 C20orf78Q9BR46 151 aa10.61□□□□□ -0.71
DDR1-230ENST00000412274 TSHBP01222 138 aa10.6□□□□□ -0.71
DDR1-230ENST00000412274 FGF6P10767 208 aa10.6□□□□□ -0.71
DDR1-230ENST00000412274 UQCC3Q6UW78 93 aa10.6□□□□□ -0.71
DDR1-230ENST00000412274 Q6ZSA8 131 aa10.6□□□□□ -0.71
DDR1-230ENST00000412274 TRBV24-1A0A075B6N3 115 aa10.59□□□□□ -0.71
DDR1-230ENST00000412274 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.59□□□□□ -0.71
DDR1-230ENST00000412274 IGKV2-29A2NJV5 120 aaPredicted RBP10.59□□□□□ -0.71
DDR1-230ENST00000412274 PPBPP02775 128 aa10.59□□□□□ -0.71
DDR1-230ENST00000412274 FCER1GP30273 86 aa10.59□□□□□ -0.71
DDR1-230ENST00000412274 CKS2P33552 79 aa10.59□□□□□ -0.71
DDR1-230ENST00000412274 RPS10P46783 165 aaKnown RBP10.59□□□□□ -0.71
DDR1-230ENST00000412274 RPL32P62910 135 aaKnown RBP10.59□□□□□ -0.71
DDR1-230ENST00000412274 MRPL51Q4U2R6 128 aaKnown RBP10.59□□□□□ -0.71
DDR1-230ENST00000412274 CFAP161Q6P656 301 aa10.59□□□□□ -0.71
DDR1-230ENST00000412274 MRPL52Q86TS9 123 aaKnown RBP10.59□□□□□ -0.71
DDR1-230ENST00000412274 NRACQ8N912 160 aa10.59□□□□□ -0.71
DDR1-230ENST00000412274 DEFB104AQ8WTQ1 72 aa10.59□□□□□ -0.71
DDR1-230ENST00000412274 IGLV10-54A0A075B6I4 117 aa10.58□□□□□ -0.72
DDR1-230ENST00000412274 A0A1B0GXF2 115 aa10.58□□□□□ -0.72
DDR1-230ENST00000412274 C7orf77A4D0Y5 90 aa10.58□□□□□ -0.72
DDR1-230ENST00000412274 FAM229AH3BQW9 127 aa10.58□□□□□ -0.72
DDR1-230ENST00000412274 PHOX2AO14813 284 aa10.58□□□□□ -0.72
DDR1-230ENST00000412274 GAS8-AS1O95177 125 aa10.58□□□□□ -0.72
DDR1-230ENST00000412274 OR5A1Q8NGJ0 315 aa10.58□□□□□ -0.72
DDR1-230ENST00000412274 TMEM18Q96B42 140 aa10.58□□□□□ -0.72
DDR1-230ENST00000412274 TMEM242Q9NWH2 141 aa10.58□□□□□ -0.72
DDR1-230ENST00000412274 CSDC2Q9Y534 153 aaKnown RBP10.57□□□□□ -0.72
DDR1-230ENST00000412274 PRSS1P07477 247 aa10.56□□□□□ -0.72
DDR1-230ENST00000412274 MRPL54Q6P161 138 aaKnown RBP10.56□□□□□ -0.72
DDR1-230ENST00000412274 KRTAP4-5Q9BYR2 181 aa10.56□□□□□ -0.72
DDR1-230ENST00000412274 AP5S1Q9NUS5 200 aa10.56□□□□□ -0.72
DDR1-230ENST00000412274 PCLOQ9Y6V0 5065 aa10.55□□□□□ -0.72
DDR1-230ENST00000412274 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.55□□□□□ -0.72
DDR1-230ENST00000412274 SMKR1H3BMG3 65 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms