RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 KLLNB2CW77 178 aa3.74□□□□□ -1.81
HERC4-205ENST00000412272 C15orf32Q32M92 178 aa3.74□□□□□ -1.81
HERC4-205ENST00000412272 BBC3Q96PG8 261 aaPredicted RBP3.74□□□□□ -1.81
HERC4-205ENST00000412272 CCL4P13236 92 aa3.74□□□□□ -1.81
HERC4-205ENST00000412272 POLR2KP53803 58 aaKnown RBP3.74□□□□□ -1.81
HERC4-205ENST00000412272 Q5VV11 94 aa3.74□□□□□ -1.81
HERC4-205ENST00000412272 NDPQ00604 133 aa3.73□□□□□ -1.81
HERC4-205ENST00000412272 CLEC19AQ6UXS0 136 aa3.73□□□□□ -1.81
HERC4-205ENST00000412272 CCL13Q99616 98 aa3.73□□□□□ -1.81
HERC4-205ENST00000412272 RNF5Q99942 180 aa3.73□□□□□ -1.81
HERC4-205ENST00000412272 SVILO95425 2214 aa3.73□□□□□ -1.81
HERC4-205ENST00000412272 ASPMQ8IZT6 3477 aa3.73□□□□□ -1.81
HERC4-205ENST00000412272 TFF2Q03403 129 aa3.73□□□□□ -1.81
HERC4-205ENST00000412272 ITLN2Q8WWU7 325 aaPredicted RBP3.73□□□□□ -1.81
HERC4-205ENST00000412272 ARFGEF3Q5TH69 2177 aa3.73□□□□□ -1.81
HERC4-205ENST00000412272 DOCK10Q96BY6 2186 aa3.73□□□□□ -1.81
HERC4-205ENST00000412272 CTSGP08311 255 aa3.73□□□□□ -1.81
HERC4-205ENST00000412272 DYNLRB2Q8TF09 96 aa3.73□□□□□ -1.81
HERC4-205ENST00000412272 IGKV2-40A0A087WW87 121 aaPredicted RBP3.72□□□□□ -1.81
HERC4-205ENST00000412272 K7EIM0 57 aa3.72□□□□□ -1.81
HERC4-205ENST00000412272 IGKV2D-40P01614 121 aaPredicted RBP3.72□□□□□ -1.81
HERC4-205ENST00000412272 IGLV1-44P01699 117 aa3.72□□□□□ -1.81
HERC4-205ENST00000412272 TFF1P04155 84 aa3.72□□□□□ -1.81
HERC4-205ENST00000412272 PRB4P10163 310 aaPredicted RBP3.72□□□□□ -1.81
HERC4-205ENST00000412272 RPL27AP46776 148 aaKnown RBP3.72□□□□□ -1.81
HERC4-205ENST00000412272 NKAPP1Q8N9T2 125 aa3.72□□□□□ -1.81
HERC4-205ENST00000412272 GAFA1Q96PS6 74 aa3.72□□□□□ -1.81
HERC4-205ENST00000412272 C9orf47Q6ZRZ4 202 aa3.72□□□□□ -1.81
HERC4-205ENST00000412272 ZNF625Q96I27 306 aaPredicted RBP3.72□□□□□ -1.81
HERC4-205ENST00000412272 RNF186Q9NXI6 227 aa3.72□□□□□ -1.81
HERC4-205ENST00000412272 C11orf21Q9P2W6 132 aa3.72□□□□□ -1.81
HERC4-205ENST00000412272 SMAD5-AS1Q9Y6J3 95 aa3.72□□□□□ -1.81
HERC4-205ENST00000412272 COL27A1Q8IZC6 1860 aaPredicted RBP3.72□□□□□ -1.81
HERC4-205ENST00000412272 SOCS3O14543 225 aa3.72□□□□□ -1.81
HERC4-205ENST00000412272 IGHV3-9P01782 118 aa3.72□□□□□ -1.81
HERC4-205ENST00000412272 SPINK2P20155 84 aa3.72□□□□□ -1.81
HERC4-205ENST00000412272 LEAP2Q969E1 77 aa3.72□□□□□ -1.81
HERC4-205ENST00000412272 ZNF580Q9UK33 172 aa3.72□□□□□ -1.81
HERC4-205ENST00000412272 KIF25-AS1Q9Y6Z4 181 aa3.72□□□□□ -1.81
HERC4-205ENST00000412272 C10orf55Q5SWW7 151 aa3.71□□□□□ -1.81
HERC4-205ENST00000412272 TMEM254Q8TBM7 123 aa3.71□□□□□ -1.81
HERC4-205ENST00000412272 LRCOL1A6NCL2 159 aa3.71□□□□□ -1.82
HERC4-205ENST00000412272 GNRH2O43555 120 aa3.71□□□□□ -1.82
HERC4-205ENST00000412272 ERC2-IT1O76042 136 aa3.71□□□□□ -1.82
HERC4-205ENST00000412272 LINC01554Q52M75 96 aa3.71□□□□□ -1.82
HERC4-205ENST00000412272 PIK3CD-AS1Q5SR53 167 aa3.71□□□□□ -1.82
HERC4-205ENST00000412272 Q9HAA7 133 aa3.71□□□□□ -1.82
HERC4-205ENST00000412272 LINC00315P59091 139 aa3.71□□□□□ -1.82
HERC4-205ENST00000412272 K7EQG2 157 aa3.71□□□□□ -1.82
HERC4-205ENST00000412272 ZNHIT1O43257 154 aa3.71□□□□□ -1.82
HERC4-205ENST00000412272 LINC01560Q8TB33 94 aa3.71□□□□□ -1.82
HERC4-205ENST00000412272 UBE2AP49459 152 aa3.7□□□□□ -1.82
HERC4-205ENST00000412272 ZNRF1Q8ND25 227 aa3.7□□□□□ -1.82
HERC4-205ENST00000412272 PINLYPA6NC86 204 aa3.7□□□□□ -1.82
HERC4-205ENST00000412272 SPTSSBQ8NFR3 76 aa3.7□□□□□ -1.82
HERC4-205ENST00000412272 RANBP2P49792 3224 aaKnown RBP3.7□□□□□ -1.82
HERC4-205ENST00000412272 CADP27708 2225 aa3.7□□□□□ -1.82
HERC4-205ENST00000412272 IGHV3-48P01763 117 aa3.7□□□□□ -1.82
HERC4-205ENST00000412272 C18orf65Q6ZTR6 163 aa3.7□□□□□ -1.82
HERC4-205ENST00000412272 NDUFA12Q9UI09 145 aa3.7□□□□□ -1.82
HERC4-205ENST00000412272 DNAH12Q6ZR08 3092 aa3.7□□□□□ -1.82
HERC4-205ENST00000412272 HCG22E2RYF7 251 aa3.69□□□□□ -1.82
HERC4-205ENST00000412272 F8W735 103 aaPredicted RBP3.69□□□□□ -1.82
HERC4-205ENST00000412272 PRYO14603 147 aa3.69□□□□□ -1.82
HERC4-205ENST00000412272 C11orf72Q8NBR9 251 aa3.69□□□□□ -1.82
HERC4-205ENST00000412272 IGHV3-64A0A075B6Q5 118 aa3.69□□□□□ -1.82
HERC4-205ENST00000412272 IGHV3-30-3P0DP02 117 aa3.69□□□□□ -1.82
HERC4-205ENST00000412272 DEFB133Q30KQ1 61 aa3.69□□□□□ -1.82
HERC4-205ENST00000412272 SPANXN1Q5VSR9 72 aa3.69□□□□□ -1.82
HERC4-205ENST00000412272 C1orf64Q8NEQ6 169 aa3.69□□□□□ -1.82
HERC4-205ENST00000412272 Q8TAT8 98 aa3.69□□□□□ -1.82
HERC4-205ENST00000412272 RPL39LQ96EH5 51 aaKnown RBP3.69□□□□□ -1.82
HERC4-205ENST00000412272 IGHV1-2P23083 117 aa3.69□□□□□ -1.82
HERC4-205ENST00000412272 DNAJC13O75165 2243 aa3.69□□□□□ -1.82
HERC4-205ENST00000412272 IGLV3-9A0A075B6K5 115 aa3.68□□□□□ -1.82
HERC4-205ENST00000412272 NCR3O14931 201 aa3.68□□□□□ -1.82
HERC4-205ENST00000412272 NDUFA1O15239 70 aa3.68□□□□□ -1.82
HERC4-205ENST00000412272 TNCP24821 2201 aa3.68□□□□□ -1.82
HERC4-205ENST00000412272 IGLV5-45A0A087WSX0 123 aa3.68□□□□□ -1.82
HERC4-205ENST00000412272 H0Y9J4 135 aa3.68□□□□□ -1.82
HERC4-205ENST00000412272 MP68P56378 58 aa3.68□□□□□ -1.82
HERC4-205ENST00000412272 SDK2Q58EX2 2172 aa3.68□□□□□ -1.82
HERC4-205ENST00000412272 IGLV11-55A0A075B6I3 123 aa3.68□□□□□ -1.82
HERC4-205ENST00000412272 PSCAO43653 123 aa3.68□□□□□ -1.82
HERC4-205ENST00000412272 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.68□□□□□ -1.82
HERC4-205ENST00000412272 MGAQ8IWI9 3026 aa3.67□□□□□ -1.82
HERC4-205ENST00000412272 IGHV1-3A0A0C4DH29 117 aa3.67□□□□□ -1.82
HERC4-205ENST00000412272 LINC00167Q96N53 147 aa3.67□□□□□ -1.82
HERC4-205ENST00000412272 KIAA0087Q14695 138 aa3.67□□□□□ -1.82
HERC4-205ENST00000412272 NREPQ16612 68 aa3.67□□□□□ -1.82
HERC4-205ENST00000412272 FAM104AQ969W3 186 aa3.67□□□□□ -1.82
HERC4-205ENST00000412272 RPL39P62891 51 aaKnown RBP3.66□□□□□ -1.82
HERC4-205ENST00000412272 CXCL6P80162 114 aa3.66□□□□□ -1.82
HERC4-205ENST00000412272 NPBQ8NG41 125 aa3.66□□□□□ -1.82
HERC4-205ENST00000412272 IGLV4-3A0A075B6K6 122 aa3.66□□□□□ -1.82
HERC4-205ENST00000412272 A0A087WYN8 130 aa3.66□□□□□ -1.82
HERC4-205ENST00000412272 FDCSPQ8NFU4 85 aa3.66□□□□□ -1.82
HERC4-205ENST00000412272 PRAC2D3DTV9 90 aa3.66□□□□□ -1.82
HERC4-205ENST00000412272 MIR7-3HGQ8N6C7 128 aa3.66□□□□□ -1.82
HERC4-205ENST00000412272 C20orf203Q8NBC4 194 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms