RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 SPATA25Q9BR10 227 aa8.78□□□□□ -1
CHMP3-204ENST00000409727 PRADC1Q9BSG0 188 aa8.78□□□□□ -1
CHMP3-204ENST00000409727 A0A0J9YY99 117 aa8.77□□□□□ -1.01
CHMP3-204ENST00000409727 F5H768 121 aa8.77□□□□□ -1.01
CHMP3-204ENST00000409727 SYS1-DBNDD2H3BUS1 97 aa8.77□□□□□ -1.01
CHMP3-204ENST00000409727 ATP5G1P05496 136 aa8.77□□□□□ -1.01
CHMP3-204ENST00000409727 TOMM6Q96B49 74 aa8.77□□□□□ -1.01
CHMP3-204ENST00000409727 PMCHL2Q9BQD1 86 aa8.77□□□□□ -1.01
CHMP3-204ENST00000409727 GYPEP15421 78 aa8.76□□□□□ -1.01
CHMP3-204ENST00000409727 CRYBA4P53673 196 aa8.76□□□□□ -1.01
CHMP3-204ENST00000409727 UBE2D3P61077 147 aa8.76□□□□□ -1.01
CHMP3-204ENST00000409727 UBE2D2P62837 147 aa8.76□□□□□ -1.01
CHMP3-204ENST00000409727 COTL1Q14019 142 aa8.76□□□□□ -1.01
CHMP3-204ENST00000409727 C12orf74Q32Q52 190 aa8.76□□□□□ -1.01
CHMP3-204ENST00000409727 ATOH7Q8N100 152 aa8.76□□□□□ -1.01
CHMP3-204ENST00000409727 Q8N976 141 aa8.76□□□□□ -1.01
CHMP3-204ENST00000409727 SCGB3A1Q96QR1 104 aa8.76□□□□□ -1.01
CHMP3-204ENST00000409727 TM2D3Q9BRN9 247 aa8.76□□□□□ -1.01
CHMP3-204ENST00000409727 CYSLTR1Q9Y271 337 aa8.76□□□□□ -1.01
CHMP3-204ENST00000409727 PAX4O43316 350 aa8.75□□□□□ -1.01
CHMP3-204ENST00000409727 C11orf68Q9H3H3 251 aaKnown RBP8.75□□□□□ -1.01
CHMP3-204ENST00000409727 PRO0255Q9UI72 69 aa8.75□□□□□ -1.01
CHMP3-204ENST00000409727 A0A096LPF7 62 aa8.74□□□□□ -1.01
CHMP3-204ENST00000409727 TEX48A0A1B0GUV7 120 aa8.74□□□□□ -1.01
CHMP3-204ENST00000409727 PRSS1P07477 247 aa8.74□□□□□ -1.01
CHMP3-204ENST00000409727 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.74□□□□□ -1.01
CHMP3-204ENST00000409727 TRAV26-1A0A087WT03 109 aa8.74□□□□□ -1.01
CHMP3-204ENST00000409727 IGKV2-29A2NJV5 120 aaPredicted RBP8.74□□□□□ -1.01
CHMP3-204ENST00000409727 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.74□□□□□ -1.01
CHMP3-204ENST00000409727 ATP5LO75964 103 aa8.74□□□□□ -1.01
CHMP3-204ENST00000409727 DAZ4Q86SG3 579 aaKnown RBP8.74□□□□□ -1.01
CHMP3-204ENST00000409727 DAZ3Q9NR90 486 aaKnown RBP8.74□□□□□ -1.01
CHMP3-204ENST00000409727 PGPEP1Q9NXJ5 209 aa8.74□□□□□ -1.01
CHMP3-204ENST00000409727 NANOS2P60321 138 aaKnown RBP8.73□□□□□ -1.01
CHMP3-204ENST00000409727 KRTAP21-3Q3LHN1 58 aa8.73□□□□□ -1.01
CHMP3-204ENST00000409727 Q6ZTC4 211 aa8.73□□□□□ -1.01
CHMP3-204ENST00000409727 C20orf203Q8NBC4 194 aa8.73□□□□□ -1.01
CHMP3-204ENST00000409727 CHCHD7Q9BUK0 85 aa8.73□□□□□ -1.01
CHMP3-204ENST00000409727 ZMAT4Q9H898 229 aa8.73□□□□□ -1.01
CHMP3-204ENST00000409727 TENM3Q9P273 2699 aa8.73□□□□□ -1.01
CHMP3-204ENST00000409727 G0S2P27469 103 aa8.72□□□□□ -1.01
CHMP3-204ENST00000409727 PET117Q6UWS5 81 aa8.72□□□□□ -1.01
CHMP3-204ENST00000409727 Q6ZN92 141 aa8.72□□□□□ -1.01
CHMP3-204ENST00000409727 C11orf45Q8TAV5 145 aa8.72□□□□□ -1.01
CHMP3-204ENST00000409727 VSIG2Q96IQ7 327 aa8.72□□□□□ -1.01
CHMP3-204ENST00000409727 C20orf202A1L168 122 aa8.72□□□□□ -1.01
CHMP3-204ENST00000409727 CEMP1Q6PRD7 247 aaPredicted RBP8.72□□□□□ -1.01
CHMP3-204ENST00000409727 NTM-AS1Q6ZSK4 140 aa8.72□□□□□ -1.01
CHMP3-204ENST00000409727 ERASQ7Z444 233 aa8.72□□□□□ -1.01
CHMP3-204ENST00000409727 OPRPNQ99935 248 aaPredicted RBP8.72□□□□□ -1.01
CHMP3-204ENST00000409727 ZC2HC1BQ5TFG8 222 aa8.71□□□□□ -1.01
CHMP3-204ENST00000409727 IGIPA6NJ69 53 aa8.7□□□□□ -1.02
CHMP3-204ENST00000409727 LINC00694P0DN24 101 aa8.7□□□□□ -1.02
CHMP3-204ENST00000409727 S100A12P80511 92 aa8.7□□□□□ -1.02
CHMP3-204ENST00000409727 MAJINQ3KP22 176 aa8.7□□□□□ -1.02
CHMP3-204ENST00000409727 LINC01545Q5VT33 79 aa8.7□□□□□ -1.02
CHMP3-204ENST00000409727 ATP6V0E2Q8NHE4 81 aa8.7□□□□□ -1.02
CHMP3-204ENST00000409727 BAALCQ8WXS3 180 aa8.7□□□□□ -1.02
CHMP3-204ENST00000409727 LINC00528Q8N1L1 170 aa8.7□□□□□ -1.02
CHMP3-204ENST00000409727 RNASE13Q5GAN3 156 aaKnown RBP8.69□□□□□ -1.02
CHMP3-204ENST00000409727 TEX43Q6ZNM6 134 aa8.69□□□□□ -1.02
CHMP3-204ENST00000409727 PAM16Q9Y3D7 125 aa8.69□□□□□ -1.02
CHMP3-204ENST00000409727 DEFA6Q01524 100 aa8.68□□□□□ -1.02
CHMP3-204ENST00000409727 ODF1Q14990 250 aa8.68□□□□□ -1.02
CHMP3-204ENST00000409727 TMEM141Q96I45 108 aa8.68□□□□□ -1.02
CHMP3-204ENST00000409727 TIMM17AQ99595 171 aa8.68□□□□□ -1.02
CHMP3-204ENST00000409727 VAMP8Q9BV40 100 aa8.68□□□□□ -1.02
CHMP3-204ENST00000409727 DNHD1Q96M86 4753 aa8.68□□□□□ -1.02
CHMP3-204ENST00000409727 LINC01549A6NIU2 74 aa8.68□□□□□ -1.02
CHMP3-204ENST00000409727 LGALS9CQ6DKI2 356 aa8.68□□□□□ -1.02
CHMP3-204ENST00000409727 B9D2Q9BPU9 175 aa8.68□□□□□ -1.02
CHMP3-204ENST00000409727 GTSF1LQ9H1H1 148 aa8.68□□□□□ -1.02
CHMP3-204ENST00000409727 UBE2D4Q9Y2X8 147 aa8.68□□□□□ -1.02
CHMP3-204ENST00000409727 TRBV25-1A0A075B6N4 114 aa8.67□□□□□ -1.02
CHMP3-204ENST00000409727 DEFB131BA0A096LNP1 70 aa8.67□□□□□ -1.02
CHMP3-204ENST00000409727 TRBV6-8A0A0A6YYG3 113 aa8.67□□□□□ -1.02
CHMP3-204ENST00000409727 hDV102S1A0JD36 115 aa8.67□□□□□ -1.02
CHMP3-204ENST00000409727 PCP4L1A6NKN8 68 aa8.67□□□□□ -1.02
CHMP3-204ENST00000409727 UBE2L6O14933 153 aa8.67□□□□□ -1.02
CHMP3-204ENST00000409727 TMEM243Q9BU79 118 aa8.67□□□□□ -1.02
CHMP3-204ENST00000409727 MRPL35Q9NZE8 188 aaKnown RBP8.67□□□□□ -1.02
CHMP3-204ENST00000409727 IGLV4-3A0A075B6K6 122 aa8.66□□□□□ -1.02
CHMP3-204ENST00000409727 A0A087WX48 190 aa8.66□□□□□ -1.02
CHMP3-204ENST00000409727 PRSS29PA6NIE9 313 aa8.66□□□□□ -1.02
CHMP3-204ENST00000409727 TCTAP57738 103 aa8.66□□□□□ -1.02
CHMP3-204ENST00000409727 CHCHD5Q9BSY4 110 aa8.66□□□□□ -1.02
CHMP3-204ENST00000409727 PRO1933Q9H354 126 aa8.66□□□□□ -1.02
CHMP3-204ENST00000409727 CHTOPQ9Y3Y2 248 aaKnown RBP8.66□□□□□ -1.02
CHMP3-204ENST00000409727 ICOSQ9Y6W8 199 aa8.66□□□□□ -1.02
CHMP3-204ENST00000409727 GAGE6Q13070 117 aa8.66□□□□□ -1.02
CHMP3-204ENST00000409727 PMVKQ15126 192 aa8.66□□□□□ -1.02
CHMP3-204ENST00000409727 DGAT2L7PQ6IED9 249 aa8.66□□□□□ -1.02
CHMP3-204ENST00000409727 ZNF664Q8N3J9 261 aa8.66□□□□□ -1.02
CHMP3-204ENST00000409727 FGF6P10767 208 aa8.65□□□□□ -1.02
CHMP3-204ENST00000409727 MRPL23Q16540 153 aaKnown RBP8.65□□□□□ -1.02
CHMP3-204ENST00000409727 SPATA45Q537H7 98 aa8.65□□□□□ -1.02
CHMP3-204ENST00000409727 AMMECR1LQ6DCA0 310 aa8.65□□□□□ -1.02
CHMP3-204ENST00000409727 Q6ZUT4 128 aa8.65□□□□□ -1.02
CHMP3-204ENST00000409727 VCX2Q9H322 139 aa8.65□□□□□ -1.02
CHMP3-204ENST00000409727 CST9LQ9H4G1 147 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms