RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 LOC389332A0A1B0GUA5 103 aa11.36□□□□□ -0.59
TSPAN4-208ENST00000409531 K7EMI3 77 aa11.36□□□□□ -0.59
TSPAN4-208ENST00000409531 UBE2DNLQ8IWF7 75 aa11.36□□□□□ -0.59
TSPAN4-208ENST00000409531 Q8N8P6 123 aa11.36□□□□□ -0.59
TSPAN4-208ENST00000409531 PRSS3P2Q8NHM4 247 aa11.36□□□□□ -0.59
TSPAN4-208ENST00000409531 C18orf32Q8TCD1 76 aa11.36□□□□□ -0.59
TSPAN4-208ENST00000409531 TRAV8-6A0A0B4J262 113 aa11.35□□□□□ -0.59
TSPAN4-208ENST00000409531 IGHV1-24A0A0C4DH33 117 aa11.35□□□□□ -0.59
TSPAN4-208ENST00000409531 MRPS16Q9Y3D3 137 aaKnown RBP11.35□□□□□ -0.59
TSPAN4-208ENST00000409531 TSHBP01222 138 aa11.35□□□□□ -0.59
TSPAN4-208ENST00000409531 IFI27P40305 119 aaPredicted RBP11.35□□□□□ -0.59
TSPAN4-208ENST00000409531 AMTP48728 403 aa11.35□□□□□ -0.59
TSPAN4-208ENST00000409531 IQCJQ1A5X6 159 aa11.35□□□□□ -0.59
TSPAN4-208ENST00000409531 LINC00588Q9Y4M8 146 aa11.35□□□□□ -0.59
TSPAN4-208ENST00000409531 IGLV2-18A0A075B6J9 118 aa11.34□□□□□ -0.59
TSPAN4-208ENST00000409531 C1orf196B1AJZ1 125 aa11.34□□□□□ -0.59
TSPAN4-208ENST00000409531 RAB5BP61020 215 aa11.34□□□□□ -0.59
TSPAN4-208ENST00000409531 PKIAP61925 76 aa11.34□□□□□ -0.59
TSPAN4-208ENST00000409531 NTM-AS1Q6ZSK4 140 aa11.34□□□□□ -0.59
TSPAN4-208ENST00000409531 FA2HQ7L5A8 372 aa11.34□□□□□ -0.59
TSPAN4-208ENST00000409531 UPK3BQ9BT76 320 aa11.34□□□□□ -0.59
TSPAN4-208ENST00000409531 TMEM243Q9BU79 118 aa11.34□□□□□ -0.59
TSPAN4-208ENST00000409531 ORMDL2Q53FV1 153 aa11.33□□□□□ -0.6
TSPAN4-208ENST00000409531 KMT2AQ03164 3969 aa11.32□□□□□ -0.6
TSPAN4-208ENST00000409531 VPS13DQ5THJ4 4388 aa11.32□□□□□ -0.6
TSPAN4-208ENST00000409531 UBE2L6O14933 153 aa11.32□□□□□ -0.6
TSPAN4-208ENST00000409531 Q0VG73 95 aa11.32□□□□□ -0.6
TSPAN4-208ENST00000409531 DEFB104AQ8WTQ1 72 aa11.32□□□□□ -0.6
TSPAN4-208ENST00000409531 TMEM18Q96B42 140 aa11.32□□□□□ -0.6
TSPAN4-208ENST00000409531 CHCHD5Q9BSY4 110 aa11.32□□□□□ -0.6
TSPAN4-208ENST00000409531 H7C423 109 aa11.31□□□□□ -0.6
TSPAN4-208ENST00000409531 G0S2P27469 103 aa11.31□□□□□ -0.6
TSPAN4-208ENST00000409531 LAGE3Q14657 143 aa11.31□□□□□ -0.6
TSPAN4-208ENST00000409531 BAGE3Q86Y29 109 aa11.31□□□□□ -0.6
TSPAN4-208ENST00000409531 LINC01546A6NGU7 62 aa11.3□□□□□ -0.6
TSPAN4-208ENST00000409531 LINC00614P0C842 121 aa11.3□□□□□ -0.6
TSPAN4-208ENST00000409531 ESDP10768 282 aa11.3□□□□□ -0.6
TSPAN4-208ENST00000409531 SMAGPQ0VAQ4 97 aa11.3□□□□□ -0.6
TSPAN4-208ENST00000409531 CHCHD7Q9BUK0 85 aa11.3□□□□□ -0.6
TSPAN4-208ENST00000409531 AP5S1Q9NUS5 200 aa11.3□□□□□ -0.6
TSPAN4-208ENST00000409531 SIVA1O15304 175 aa11.29□□□□□ -0.6
TSPAN4-208ENST00000409531 HIST1H2BKO60814 126 aa11.29□□□□□ -0.6
TSPAN4-208ENST00000409531 HIST1H2BJP06899 126 aa11.29□□□□□ -0.6
TSPAN4-208ENST00000409531 HIST1H2BOP23527 126 aa11.29□□□□□ -0.6
TSPAN4-208ENST00000409531 HIST1H2BBP33778 126 aa11.29□□□□□ -0.6
TSPAN4-208ENST00000409531 HIST1H2BDP58876 126 aa11.29□□□□□ -0.6
TSPAN4-208ENST00000409531 HIST1H2BCP62807 126 aa11.29□□□□□ -0.6
TSPAN4-208ENST00000409531 HIST2H2BEQ16778 126 aa11.29□□□□□ -0.6
TSPAN4-208ENST00000409531 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.29□□□□□ -0.6
TSPAN4-208ENST00000409531 NIT1Q86X76 327 aa11.29□□□□□ -0.6
TSPAN4-208ENST00000409531 HIST1H2BHQ93079 126 aa11.29□□□□□ -0.6
TSPAN4-208ENST00000409531 HIST1H2BNQ99877 126 aa11.29□□□□□ -0.6
TSPAN4-208ENST00000409531 HIST1H2BMQ99879 126 aa11.29□□□□□ -0.6
TSPAN4-208ENST00000409531 A0A087WX48 190 aa11.28□□□□□ -0.6
TSPAN4-208ENST00000409531 TMEM262E9PQX1 116 aa11.28□□□□□ -0.6
TSPAN4-208ENST00000409531 RNASEKQ6P5S7 137 aaKnown RBP11.28□□□□□ -0.6
TSPAN4-208ENST00000409531 WFDC10BQ8IUB3 73 aa11.28□□□□□ -0.6
TSPAN4-208ENST00000409531 C20orf203Q8NBC4 194 aa11.28□□□□□ -0.6
TSPAN4-208ENST00000409531 CHCHD1Q96BP2 118 aaKnown RBP11.28□□□□□ -0.6
TSPAN4-208ENST00000409531 LINC01549A6NIU2 74 aa11.27□□□□□ -0.61
TSPAN4-208ENST00000409531 Q9H8V8 135 aa11.27□□□□□ -0.61
TSPAN4-208ENST00000409531 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.26□□□□□ -0.61
TSPAN4-208ENST00000409531 IGKV2-29A2NJV5 120 aaPredicted RBP11.26□□□□□ -0.61
TSPAN4-208ENST00000409531 GAGE6Q13070 117 aa11.26□□□□□ -0.61
TSPAN4-208ENST00000409531 LINC01556Q5JQF7 62 aa11.26□□□□□ -0.61
TSPAN4-208ENST00000409531 AMMECR1LQ6DCA0 310 aa11.26□□□□□ -0.61
TSPAN4-208ENST00000409531 HERC2O95714 4834 aa11.25□□□□□ -0.61
TSPAN4-208ENST00000409531 K7EP13 123 aa11.25□□□□□ -0.61
TSPAN4-208ENST00000409531 DNAH10OSP0CZ25 163 aa11.25□□□□□ -0.61
TSPAN4-208ENST00000409531 ZNF25P17030 456 aaPredicted RBP11.25□□□□□ -0.61
TSPAN4-208ENST00000409531 URB1-AS1Q96HZ7 61 aa11.25□□□□□ -0.61
TSPAN4-208ENST00000409531 CYSLTR1Q9Y271 337 aa11.25□□□□□ -0.61
TSPAN4-208ENST00000409531 TRAV9-2A0A087WT02 112 aa11.24□□□□□ -0.61
TSPAN4-208ENST00000409531 A0A1B0GUV1 79 aa11.24□□□□□ -0.61
TSPAN4-208ENST00000409531 M0R2N4 97 aa11.24□□□□□ -0.61
TSPAN4-208ENST00000409531 BTF3P20290 206 aaKnown RBP11.24□□□□□ -0.61
TSPAN4-208ENST00000409531 C2orf66Q6UXQ4 117 aa11.24□□□□□ -0.61
TSPAN4-208ENST00000409531 MRPL52Q86TS9 123 aaKnown RBP11.24□□□□□ -0.61
TSPAN4-208ENST00000409531 TMEM101Q96IK0 257 aa11.24□□□□□ -0.61
TSPAN4-208ENST00000409531 HSBP1O75506 76 aa11.23□□□□□ -0.61
TSPAN4-208ENST00000409531 FGF6P10767 208 aa11.23□□□□□ -0.61
TSPAN4-208ENST00000409531 MPV17L2Q567V2 206 aa11.23□□□□□ -0.61
TSPAN4-208ENST00000409531 C10orf126Q8N4M7 172 aa11.23□□□□□ -0.61
TSPAN4-208ENST00000409531 TIMM21Q9BVV7 248 aa11.23□□□□□ -0.61
TSPAN4-208ENST00000409531 SPANXA1Q9NS26 97 aa11.23□□□□□ -0.61
TSPAN4-208ENST00000409531 SERF1AO75920 110 aa11.22□□□□□ -0.61
TSPAN4-208ENST00000409531 IGHV3-30P01768 117 aa11.22□□□□□ -0.61
TSPAN4-208ENST00000409531 IGHV3-33P01772 117 aa11.22□□□□□ -0.61
TSPAN4-208ENST00000409531 HBDP02042 147 aa11.22□□□□□ -0.61
TSPAN4-208ENST00000409531 IGHV3-30-3P0DP02 117 aa11.22□□□□□ -0.61
TSPAN4-208ENST00000409531 IGHV3-30-5P0DP03 117 aa11.22□□□□□ -0.61
TSPAN4-208ENST00000409531 RPL39P62891 51 aaKnown RBP11.22□□□□□ -0.61
TSPAN4-208ENST00000409531 TTC32Q5I0X7 151 aa11.22□□□□□ -0.61
TSPAN4-208ENST00000409531 DGAT2L7PQ6IED9 249 aa11.22□□□□□ -0.61
TSPAN4-208ENST00000409531 TOMM6Q96B49 74 aa11.22□□□□□ -0.61
TSPAN4-208ENST00000409531 CSDC2Q9Y534 153 aaKnown RBP11.22□□□□□ -0.61
TSPAN4-208ENST00000409531 PCLOQ9Y6V0 5065 aa11.21□□□□□ -0.61
TSPAN4-208ENST00000409531 RBX1P62877 108 aa11.21□□□□□ -0.61
TSPAN4-208ENST00000409531 Q6ZR54 194 aa11.21□□□□□ -0.61
TSPAN4-208ENST00000409531 OR5A1Q8NGJ0 315 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms