RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 SBSPONQ8IVN8 264 aa9.91□□□□□ -0.82
GPNMB-203ENST00000409458 DNHD1Q96M86 4753 aa9.91□□□□□ -0.82
GPNMB-203ENST00000409458 G0S2P27469 103 aa9.9□□□□□ -0.82
GPNMB-203ENST00000409458 LGALS9CQ6DKI2 356 aa9.9□□□□□ -0.82
GPNMB-203ENST00000409458 C20orf203Q8NBC4 194 aa9.9□□□□□ -0.82
GPNMB-203ENST00000409458 CHCHD7Q9BUK0 85 aa9.9□□□□□ -0.82
GPNMB-203ENST00000409458 NOTCH1P46531 2555 aa9.9□□□□□ -0.82
GPNMB-203ENST00000409458 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.9□□□□□ -0.83
GPNMB-203ENST00000409458 PRSS1P07477 247 aa9.9□□□□□ -0.83
GPNMB-203ENST00000409458 COTL1Q14019 142 aa9.9□□□□□ -0.83
GPNMB-203ENST00000409458 ERASQ7Z444 233 aa9.9□□□□□ -0.83
GPNMB-203ENST00000409458 ZNF664Q8N3J9 261 aa9.9□□□□□ -0.83
GPNMB-203ENST00000409458 PRADC1Q9BSG0 188 aa9.9□□□□□ -0.83
GPNMB-203ENST00000409458 VAMP8Q9BV40 100 aa9.9□□□□□ -0.83
GPNMB-203ENST00000409458 HHLA3Q9XRX5 114 aa9.9□□□□□ -0.83
GPNMB-203ENST00000409458 PAM16Q9Y3D7 125 aa9.9□□□□□ -0.83
GPNMB-203ENST00000409458 IGIPA6NJ69 53 aa9.89□□□□□ -0.83
GPNMB-203ENST00000409458 PCP4L1A6NKN8 68 aa9.89□□□□□ -0.83
GPNMB-203ENST00000409458 LINC00694P0DN24 101 aa9.89□□□□□ -0.83
GPNMB-203ENST00000409458 CRYBA4P53673 196 aa9.89□□□□□ -0.83
GPNMB-203ENST00000409458 MAJINQ3KP22 176 aa9.89□□□□□ -0.83
GPNMB-203ENST00000409458 DAZ4Q86SG3 579 aaKnown RBP9.89□□□□□ -0.83
GPNMB-203ENST00000409458 ZMAT4Q9H898 229 aa9.89□□□□□ -0.83
GPNMB-203ENST00000409458 DAZ3Q9NR90 486 aaKnown RBP9.89□□□□□ -0.83
GPNMB-203ENST00000409458 HUWE1Q7Z6Z7 4374 aaKnown RBP9.89□□□□□ -0.83
GPNMB-203ENST00000409458 ODF1Q14990 250 aa9.88□□□□□ -0.83
GPNMB-203ENST00000409458 Q6ZN92 141 aa9.88□□□□□ -0.83
GPNMB-203ENST00000409458 BAALCQ8WXS3 180 aa9.88□□□□□ -0.83
GPNMB-203ENST00000409458 PRO1933Q9H354 126 aa9.88□□□□□ -0.83
GPNMB-203ENST00000409458 C11orf68Q9H3H3 251 aaKnown RBP9.88□□□□□ -0.83
GPNMB-203ENST00000409458 NBEAL1Q6ZS30 2694 aa9.88□□□□□ -0.83
GPNMB-203ENST00000409458 LINC01549A6NIU2 74 aa9.87□□□□□ -0.83
GPNMB-203ENST00000409458 DEFB121Q5J5C9 76 aa9.87□□□□□ -0.83
GPNMB-203ENST00000409458 TIMM17AQ99595 171 aa9.87□□□□□ -0.83
GPNMB-203ENST00000409458 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.87□□□□□ -0.83
GPNMB-203ENST00000409458 TEX48A0A1B0GUV7 120 aa9.87□□□□□ -0.83
GPNMB-203ENST00000409458 IGKV2-29A2NJV5 120 aaPredicted RBP9.87□□□□□ -0.83
GPNMB-203ENST00000409458 ATP5G1P05496 136 aa9.87□□□□□ -0.83
GPNMB-203ENST00000409458 NTM-AS1Q6ZSK4 140 aa9.87□□□□□ -0.83
GPNMB-203ENST00000409458 TMEM141Q96I45 108 aa9.87□□□□□ -0.83
GPNMB-203ENST00000409458 PRO0255Q9UI72 69 aa9.87□□□□□ -0.83
GPNMB-203ENST00000409458 MGAM2Q2M2H8 2515 aa9.86□□□□□ -0.83
GPNMB-203ENST00000409458 TRAV9-2A0A087WT02 112 aa9.86□□□□□ -0.83
GPNMB-203ENST00000409458 hDV102S1A0JD36 115 aa9.86□□□□□ -0.83
GPNMB-203ENST00000409458 GYPEP15421 78 aa9.86□□□□□ -0.83
GPNMB-203ENST00000409458 PKIAP61925 76 aa9.86□□□□□ -0.83
GPNMB-203ENST00000409458 SPATA45Q537H7 98 aa9.86□□□□□ -0.83
GPNMB-203ENST00000409458 MRAPQ8TCY5 172 aa9.86□□□□□ -0.83
GPNMB-203ENST00000409458 A0A087WX48 190 aa9.85□□□□□ -0.83
GPNMB-203ENST00000409458 TRAV12-1A0A0B4J245 112 aa9.85□□□□□ -0.83
GPNMB-203ENST00000409458 A0A0J9YWU9 116 aa9.85□□□□□ -0.83
GPNMB-203ENST00000409458 C12orf74Q32Q52 190 aa9.85□□□□□ -0.83
GPNMB-203ENST00000409458 ZC2HC1BQ5TFG8 222 aa9.85□□□□□ -0.83
GPNMB-203ENST00000409458 OPRPNQ99935 248 aaPredicted RBP9.85□□□□□ -0.83
GPNMB-203ENST00000409458 SPATA25Q9BR10 227 aa9.85□□□□□ -0.83
GPNMB-203ENST00000409458 TM2D3Q9BRN9 247 aa9.85□□□□□ -0.83
GPNMB-203ENST00000409458 HTN3P15516 51 aa9.84□□□□□ -0.83
GPNMB-203ENST00000409458 VSIG2Q96IQ7 327 aa9.84□□□□□ -0.83
GPNMB-203ENST00000409458 MRPL35Q9NZE8 188 aaKnown RBP9.84□□□□□ -0.83
GPNMB-203ENST00000409458 IGLV4-3A0A075B6K6 122 aa9.83□□□□□ -0.84
GPNMB-203ENST00000409458 A0A0J9YY99 117 aa9.83□□□□□ -0.84
GPNMB-203ENST00000409458 F5H768 121 aa9.83□□□□□ -0.84
GPNMB-203ENST00000409458 PAX4O43316 350 aa9.83□□□□□ -0.84
GPNMB-203ENST00000409458 CEMP1Q6PRD7 247 aaPredicted RBP9.83□□□□□ -0.84
GPNMB-203ENST00000409458 GTSF1LQ9H1H1 148 aa9.83□□□□□ -0.84
GPNMB-203ENST00000409458 UBE2D4Q9Y2X8 147 aa9.83□□□□□ -0.84
GPNMB-203ENST00000409458 PRSS29PA6NIE9 313 aa9.83□□□□□ -0.84
GPNMB-203ENST00000409458 TSTD3H0UI37 97 aa9.83□□□□□ -0.84
GPNMB-203ENST00000409458 FAM104AQ969W3 186 aa9.83□□□□□ -0.84
GPNMB-203ENST00000409458 CHTOPQ9Y3Y2 248 aaKnown RBP9.83□□□□□ -0.84
GPNMB-203ENST00000409458 PYGO1Q9Y3Y4 419 aa9.83□□□□□ -0.84
GPNMB-203ENST00000409458 TRAV26-1A0A087WT03 109 aa9.82□□□□□ -0.84
GPNMB-203ENST00000409458 F8VRH5 84 aa9.82□□□□□ -0.84
GPNMB-203ENST00000409458 IGKCP01834 107 aa9.82□□□□□ -0.84
GPNMB-203ENST00000409458 DNAH9Q9NYC9 4486 aa9.82□□□□□ -0.84
GPNMB-203ENST00000409458 TENM3Q9P273 2699 aa9.82□□□□□ -0.84
GPNMB-203ENST00000409458 DPM2O94777 84 aa9.81□□□□□ -0.84
GPNMB-203ENST00000409458 PMVKQ15126 192 aa9.81□□□□□ -0.84
GPNMB-203ENST00000409458 CST9LQ9H4G1 147 aa9.81□□□□□ -0.84
GPNMB-203ENST00000409458 SPANXA1Q9NS26 97 aa9.81□□□□□ -0.84
GPNMB-203ENST00000409458 A0A096LPF7 62 aa9.8□□□□□ -0.84
GPNMB-203ENST00000409458 HSBP1L1C9JCN9 74 aa9.8□□□□□ -0.84
GPNMB-203ENST00000409458 Q6ZTC4 211 aa9.8□□□□□ -0.84
GPNMB-203ENST00000409458 ATP6V0E2Q8NHE4 81 aa9.8□□□□□ -0.84
GPNMB-203ENST00000409458 TRBV25-1A0A075B6N4 114 aa9.8□□□□□ -0.84
GPNMB-203ENST00000409458 Q6ZUT4 128 aa9.8□□□□□ -0.84
GPNMB-203ENST00000409458 STPG4Q8N801 248 aa9.8□□□□□ -0.84
GPNMB-203ENST00000409458 TMEM243Q9BU79 118 aa9.8□□□□□ -0.84
GPNMB-203ENST00000409458 IGLV4-69A0A075B6H9 119 aa9.79□□□□□ -0.84
GPNMB-203ENST00000409458 TRBV6-8A0A0A6YYG3 113 aa9.79□□□□□ -0.84
GPNMB-203ENST00000409458 PLNP26678 52 aa9.79□□□□□ -0.84
GPNMB-203ENST00000409458 ANKRD39Q53RE8 183 aa9.79□□□□□ -0.84
GPNMB-203ENST00000409458 RNASE13Q5GAN3 156 aaKnown RBP9.79□□□□□ -0.84
GPNMB-203ENST00000409458 NPSP0C0P6 89 aa9.78□□□□□ -0.84
GPNMB-203ENST00000409458 FGF6P10767 208 aa9.78□□□□□ -0.84
GPNMB-203ENST00000409458 TCTAP57738 103 aa9.78□□□□□ -0.84
GPNMB-203ENST00000409458 NANOS2P60321 138 aaKnown RBP9.78□□□□□ -0.84
GPNMB-203ENST00000409458 AMELXQ99217 191 aa9.78□□□□□ -0.84
GPNMB-203ENST00000409458 TIMM21Q9BVV7 248 aa9.78□□□□□ -0.84
GPNMB-203ENST00000409458 KRTAP21-3Q3LHN1 58 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms