RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.87□□□□□ -1.15
APOBEC3B-204ENST00000407298 LRP2P98164 4655 aa7.86□□□□□ -1.15
APOBEC3B-204ENST00000407298 MPV17L2Q567V2 206 aa7.86□□□□□ -1.15
APOBEC3B-204ENST00000407298 GTSF1Q8WW33 167 aa7.86□□□□□ -1.15
APOBEC3B-204ENST00000407298 CHCHD5Q9BSY4 110 aa7.86□□□□□ -1.15
APOBEC3B-204ENST00000407298 CNFNQ9BYD5 112 aa7.86□□□□□ -1.15
APOBEC3B-204ENST00000407298 RPP21Q9H633 154 aaKnown RBP7.86□□□□□ -1.15
APOBEC3B-204ENST00000407298 BIN3Q9NQY0 253 aa7.86□□□□□ -1.15
APOBEC3B-204ENST00000407298 RNF213Q63HN8 5207 aa7.86□□□□□ -1.15
APOBEC3B-204ENST00000407298 M0QY20 66 aa7.85□□□□□ -1.15
APOBEC3B-204ENST00000407298 CACNG7P62955 275 aa7.85□□□□□ -1.15
APOBEC3B-204ENST00000407298 SUMO4Q6EEV6 95 aa7.85□□□□□ -1.15
APOBEC3B-204ENST00000407298 NTM-AS1Q6ZSK4 140 aa7.85□□□□□ -1.15
APOBEC3B-204ENST00000407298 FAM210AQ96ND0 272 aa7.85□□□□□ -1.15
APOBEC3B-204ENST00000407298 IGHV3-64A0A075B6Q5 118 aa7.84□□□□□ -1.15
APOBEC3B-204ENST00000407298 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.84□□□□□ -1.15
APOBEC3B-204ENST00000407298 XKRY2A2RUG3 117 aa7.84□□□□□ -1.15
APOBEC3B-204ENST00000407298 F2Z2F3 143 aa7.84□□□□□ -1.15
APOBEC3B-204ENST00000407298 F5H697 171 aa7.84□□□□□ -1.15
APOBEC3B-204ENST00000407298 NDUFS6O75380 124 aaKnown RBP7.84□□□□□ -1.15
APOBEC3B-204ENST00000407298 MGPP08493 103 aa7.84□□□□□ -1.15
APOBEC3B-204ENST00000407298 CNBPP62633 177 aaKnown RBP7.84□□□□□ -1.15
APOBEC3B-204ENST00000407298 CIRBPQ14011 172 aaKnown RBP7.84□□□□□ -1.15
APOBEC3B-204ENST00000407298 C7orf33Q8WU49 177 aa7.84□□□□□ -1.15
APOBEC3B-204ENST00000407298 AP5S1Q9NUS5 200 aa7.84□□□□□ -1.15
APOBEC3B-204ENST00000407298 PRR34Q9NV39 138 aa7.84□□□□□ -1.15
APOBEC3B-204ENST00000407298 SRP19P09132 144 aaKnown RBP7.83□□□□□ -1.16
APOBEC3B-204ENST00000407298 SMIM17P0DL12 118 aa7.83□□□□□ -1.16
APOBEC3B-204ENST00000407298 NTF3P20783 257 aa7.83□□□□□ -1.16
APOBEC3B-204ENST00000407298 WDR73Q6P4I2 378 aa7.83□□□□□ -1.16
APOBEC3B-204ENST00000407298 FAM231DQ6ZW35 169 aa7.83□□□□□ -1.16
APOBEC3B-204ENST00000407298 hDV102S1A0JD36 115 aa7.82□□□□□ -1.16
APOBEC3B-204ENST00000407298 PANO1I0J062 215 aa7.82□□□□□ -1.16
APOBEC3B-204ENST00000407298 CEBPGP53567 150 aa7.82□□□□□ -1.16
APOBEC3B-204ENST00000407298 LINC01551Q86U37 167 aa7.82□□□□□ -1.16
APOBEC3B-204ENST00000407298 LINC00269Q8N2A0 174 aa7.82□□□□□ -1.16
APOBEC3B-204ENST00000407298 TNXBP22105 4242 aa7.81□□□□□ -1.16
APOBEC3B-204ENST00000407298 TRAV8-4A0A0B4J246 113 aa7.81□□□□□ -1.16
APOBEC3B-204ENST00000407298 C9JQL5 133 aa7.81□□□□□ -1.16
APOBEC3B-204ENST00000407298 TRGC1P0CF51 173 aa7.81□□□□□ -1.16
APOBEC3B-204ENST00000407298 RBX1P62877 108 aa7.81□□□□□ -1.16
APOBEC3B-204ENST00000407298 LINC01600Q96MT4 127 aa7.81□□□□□ -1.16
APOBEC3B-204ENST00000407298 SMIM7Q9BQ49 75 aa7.81□□□□□ -1.16
APOBEC3B-204ENST00000407298 EIF5A2Q9GZV4 153 aaKnown RBP7.81□□□□□ -1.16
APOBEC3B-204ENST00000407298 TRBV25-1A0A075B6N4 114 aa7.8□□□□□ -1.16
APOBEC3B-204ENST00000407298 A0A087WYN8 130 aa7.8□□□□□ -1.16
APOBEC3B-204ENST00000407298 GATCO43716 136 aaKnown RBP7.8□□□□□ -1.16
APOBEC3B-204ENST00000407298 FOXA3P55318 350 aaPredicted RBP7.8□□□□□ -1.16
APOBEC3B-204ENST00000407298 SRSF3P84103 164 aaKnown RBP7.8□□□□□ -1.16
APOBEC3B-204ENST00000407298 CT83Q5H943 113 aa7.8□□□□□ -1.16
APOBEC3B-204ENST00000407298 TEX261Q6UWH6 196 aa7.8□□□□□ -1.16
APOBEC3B-204ENST00000407298 TRAV26-2A0A0B4J265 109 aa7.79□□□□□ -1.16
APOBEC3B-204ENST00000407298 H7C1H1 209 aa7.79□□□□□ -1.16
APOBEC3B-204ENST00000407298 GAGE6Q13070 117 aa7.79□□□□□ -1.16
APOBEC3B-204ENST00000407298 TWIST1Q15672 202 aa7.79□□□□□ -1.16
APOBEC3B-204ENST00000407298 IQCJQ1A5X6 159 aa7.79□□□□□ -1.16
APOBEC3B-204ENST00000407298 KRTAP26-1Q6PEX3 210 aa7.79□□□□□ -1.16
APOBEC3B-204ENST00000407298 RASL11AQ6T310 242 aa7.79□□□□□ -1.16
APOBEC3B-204ENST00000407298 CLPSL2Q6UWE3 100 aa7.79□□□□□ -1.16
APOBEC3B-204ENST00000407298 ZNF727A8MUV8 499 aa7.78□□□□□ -1.16
APOBEC3B-204ENST00000407298 PHOX2AO14813 284 aa7.78□□□□□ -1.16
APOBEC3B-204ENST00000407298 REG3AQ06141 175 aa7.78□□□□□ -1.16
APOBEC3B-204ENST00000407298 GATD1Q8NB37 220 aa7.78□□□□□ -1.16
APOBEC3B-204ENST00000407298 SPACA4Q8TDM5 124 aa7.78□□□□□ -1.16
APOBEC3B-204ENST00000407298 PLAC8Q9NZF1 115 aa7.78□□□□□ -1.16
APOBEC3B-204ENST00000407298 IGHV1-24A0A0C4DH33 117 aa7.77□□□□□ -1.17
APOBEC3B-204ENST00000407298 A8MWL6 223 aa7.77□□□□□ -1.17
APOBEC3B-204ENST00000407298 CFAP161Q6P656 301 aa7.77□□□□□ -1.17
APOBEC3B-204ENST00000407298 PGLYRP4Q96LB8 373 aa7.77□□□□□ -1.17
APOBEC3B-204ENST00000407298 NIT2Q9NQR4 276 aa7.77□□□□□ -1.17
APOBEC3B-204ENST00000407298 OSTCQ9NRP0 149 aa7.77□□□□□ -1.17
APOBEC3B-204ENST00000407298 V9GYV3 84 aa7.77□□□□□ -1.17
APOBEC3B-204ENST00000407298 IGLV10-54A0A075B6I4 117 aa7.76□□□□□ -1.17
APOBEC3B-204ENST00000407298 GAS8-AS1O95177 125 aa7.76□□□□□ -1.17
APOBEC3B-204ENST00000407298 RPL23P62829 140 aaKnown RBP7.76□□□□□ -1.17
APOBEC3B-204ENST00000407298 REG3GQ6UW15 175 aa7.76□□□□□ -1.17
APOBEC3B-204ENST00000407298 TSKUQ8WUA8 353 aa7.76□□□□□ -1.17
APOBEC3B-204ENST00000407298 ISOC2Q96AB3 205 aa7.76□□□□□ -1.17
APOBEC3B-204ENST00000407298 RPL39LQ96EH5 51 aaKnown RBP7.76□□□□□ -1.17
APOBEC3B-204ENST00000407298 A0A1B0GUV1 79 aa7.75□□□□□ -1.17
APOBEC3B-204ENST00000407298 HIGD1CA8MV81 97 aa7.75□□□□□ -1.17
APOBEC3B-204ENST00000407298 CHTF8P0CG12 524 aa7.75□□□□□ -1.17
APOBEC3B-204ENST00000407298 GFRA4Q9GZZ7 299 aa7.75□□□□□ -1.17
APOBEC3B-204ENST00000407298 A0A0J9YXV3 536 aa7.74□□□□□ -1.17
APOBEC3B-204ENST00000407298 FAM231BA6NCW3 169 aa7.74□□□□□ -1.17
APOBEC3B-204ENST00000407298 C20orf203Q8NBC4 194 aa7.74□□□□□ -1.17
APOBEC3B-204ENST00000407298 IGLV4-60A0A075B6I1 120 aa7.73□□□□□ -1.17
APOBEC3B-204ENST00000407298 A0A1B0GUT8 65 aa7.73□□□□□ -1.17
APOBEC3B-204ENST00000407298 SLPIP03973 132 aa7.73□□□□□ -1.17
APOBEC3B-204ENST00000407298 RPS10P46783 165 aaKnown RBP7.73□□□□□ -1.17
APOBEC3B-204ENST00000407298 PRR3P79522 188 aaKnown RBP7.73□□□□□ -1.17
APOBEC3B-204ENST00000407298 TMEM241Q24JQ0 296 aa7.73□□□□□ -1.17
APOBEC3B-204ENST00000407298 FAM74A3Q4VXF1 159 aa7.73□□□□□ -1.17
APOBEC3B-204ENST00000407298 SPINK6Q6UWN8 80 aa7.73□□□□□ -1.17
APOBEC3B-204ENST00000407298 TMEM243Q9BU79 118 aa7.73□□□□□ -1.17
APOBEC3B-204ENST00000407298 NAT8Q9UHE5 227 aa7.73□□□□□ -1.17
APOBEC3B-204ENST00000407298 KRTAP10-8P60410 259 aa7.72□□□□□ -1.17
APOBEC3B-204ENST00000407298 COX6A2Q02221 97 aa7.72□□□□□ -1.17
APOBEC3B-204ENST00000407298 ADIRFQ15847 76 aa7.72□□□□□ -1.17
APOBEC3B-204ENST00000407298 MAJINQ3KP22 176 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms