RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 PRR15LQ9BU68 103 aa9.21□□□□□ -0.94
SMCR8-201ENST00000406438 TAX1BP3O14907 124 aa9.2□□□□□ -0.94
SMCR8-201ENST00000406438 MIAQ16674 131 aa9.2□□□□□ -0.94
SMCR8-201ENST00000406438 UFSP1Q6NVU6 142 aa9.2□□□□□ -0.94
SMCR8-201ENST00000406438 ODF1Q14990 250 aa9.2□□□□□ -0.94
SMCR8-201ENST00000406438 LINC00269Q8N2A0 174 aa9.2□□□□□ -0.94
SMCR8-201ENST00000406438 A0A087WZ39 114 aa9.2□□□□□ -0.94
SMCR8-201ENST00000406438 WFDC2Q14508 124 aa9.2□□□□□ -0.94
SMCR8-201ENST00000406438 BRK1Q8WUW1 75 aa9.2□□□□□ -0.94
SMCR8-201ENST00000406438 PRAC2D3DTV9 90 aa9.2□□□□□ -0.94
SMCR8-201ENST00000406438 FN1P02751 2386 aaKnown RBP9.19□□□□□ -0.94
SMCR8-201ENST00000406438 C7orf33Q8WU49 177 aa9.19□□□□□ -0.94
SMCR8-201ENST00000406438 LINC00173Q6ZV60 143 aa9.19□□□□□ -0.94
SMCR8-201ENST00000406438 HIGD2AQ9BW72 106 aa9.19□□□□□ -0.94
SMCR8-201ENST00000406438 MAP6D1Q9H9H5 199 aa9.19□□□□□ -0.94
SMCR8-201ENST00000406438 H7C423 109 aa9.19□□□□□ -0.94
SMCR8-201ENST00000406438 SPTSSBQ8NFR3 76 aa9.19□□□□□ -0.94
SMCR8-201ENST00000406438 A0A0J9YX75 114 aa9.18□□□□□ -0.94
SMCR8-201ENST00000406438 Q6ZUT4 128 aa9.18□□□□□ -0.94
SMCR8-201ENST00000406438 WFDC11Q8NEX6 87 aa9.18□□□□□ -0.94
SMCR8-201ENST00000406438 TRAV23DV6A0A075B6W5 121 aa9.18□□□□□ -0.94
SMCR8-201ENST00000406438 SRCAPQ6ZRS2 3230 aa9.18□□□□□ -0.94
SMCR8-201ENST00000406438 SMIM9A6NGZ8 99 aa9.18□□□□□ -0.94
SMCR8-201ENST00000406438 REG3AQ06141 175 aa9.18□□□□□ -0.94
SMCR8-201ENST00000406438 ZFAND2AQ8N6M9 145 aa9.18□□□□□ -0.94
SMCR8-201ENST00000406438 COA6Q5JTJ3 125 aaKnown RBP9.18□□□□□ -0.94
SMCR8-201ENST00000406438 C3orf22Q8N5N4 141 aa9.18□□□□□ -0.94
SMCR8-201ENST00000406438 LYRM9A8MSI8 78 aa9.17□□□□□ -0.94
SMCR8-201ENST00000406438 UBE2D1P51668 147 aa9.17□□□□□ -0.94
SMCR8-201ENST00000406438 PATE2Q6UY27 113 aa9.17□□□□□ -0.94
SMCR8-201ENST00000406438 SIRPDQ9H106 197 aa9.17□□□□□ -0.94
SMCR8-201ENST00000406438 TDRG1Q3Y452 100 aa9.17□□□□□ -0.94
SMCR8-201ENST00000406438 WT1P19544 449 aaPredicted RBP9.17□□□□□ -0.94
SMCR8-201ENST00000406438 UNQ9165/PRO28630Q6UXU0 137 aa9.17□□□□□ -0.94
SMCR8-201ENST00000406438 HIST2H2BDQ6DRA6 164 aa9.16□□□□□ -0.94
SMCR8-201ENST00000406438 NFE4Q86UQ8 179 aa9.16□□□□□ -0.94
SMCR8-201ENST00000406438 ODF3Q96PU9 254 aa9.16□□□□□ -0.94
SMCR8-201ENST00000406438 ODF3L1Q8IXM7 274 aa9.16□□□□□ -0.94
SMCR8-201ENST00000406438 Q8N7P7 452 aa9.15□□□□□ -0.94
SMCR8-201ENST00000406438 DEFB131BA0A096LNP1 70 aa9.15□□□□□ -0.94
SMCR8-201ENST00000406438 IGKV1D-37A0A075B6S9 117 aa9.15□□□□□ -0.95
SMCR8-201ENST00000406438 UBE2D4Q9Y2X8 147 aa9.14□□□□□ -0.95
SMCR8-201ENST00000406438 E7EUB6 86 aa9.14□□□□□ -0.95
SMCR8-201ENST00000406438 CDPF1Q6NVV7 123 aa9.14□□□□□ -0.95
SMCR8-201ENST00000406438 FAM19A1Q7Z5A9 133 aa9.14□□□□□ -0.95
SMCR8-201ENST00000406438 LINC00643Q86TS7 51 aa9.14□□□□□ -0.95
SMCR8-201ENST00000406438 IGLV1-47P01700 117 aa9.14□□□□□ -0.95
SMCR8-201ENST00000406438 G3V4G9 280 aa9.14□□□□□ -0.95
SMCR8-201ENST00000406438 WFDC10BQ8IUB3 73 aa9.14□□□□□ -0.95
SMCR8-201ENST00000406438 C20orf203Q8NBC4 194 aa9.14□□□□□ -0.95
SMCR8-201ENST00000406438 P0DMU3 169 aa9.13□□□□□ -0.95
SMCR8-201ENST00000406438 FAM231AP0DMU4 169 aa9.13□□□□□ -0.95
SMCR8-201ENST00000406438 FAM231CP0DMU5 169 aa9.13□□□□□ -0.95
SMCR8-201ENST00000406438 DEFB1P60022 68 aa9.13□□□□□ -0.95
SMCR8-201ENST00000406438 A0A096LNI7 61 aa9.12□□□□□ -0.95
SMCR8-201ENST00000406438 LOXL1Q08397 574 aaPredicted RBP9.12□□□□□ -0.95
SMCR8-201ENST00000406438 COL27A1Q8IZC6 1860 aaPredicted RBP9.12□□□□□ -0.95
SMCR8-201ENST00000406438 IGLV2-14P01704 120 aa9.12□□□□□ -0.95
SMCR8-201ENST00000406438 A6NDX4 124 aa9.12□□□□□ -0.95
SMCR8-201ENST00000406438 FAM222AQ5U5X8 452 aa9.12□□□□□ -0.95
SMCR8-201ENST00000406438 MPLKIPQ8TAP9 179 aa9.12□□□□□ -0.95
SMCR8-201ENST00000406438 CHCHD10Q8WYQ3 142 aaPredicted RBP9.12□□□□□ -0.95
SMCR8-201ENST00000406438 TCL1BO95988 128 aa9.12□□□□□ -0.95
SMCR8-201ENST00000406438 FBXL19-AS1Q494R0 122 aa9.12□□□□□ -0.95
SMCR8-201ENST00000406438 NUPR1O60356 82 aa9.12□□□□□ -0.95
SMCR8-201ENST00000406438 TLN2Q9Y4G6 2542 aa9.12□□□□□ -0.95
SMCR8-201ENST00000406438 LINC00467Q9BRT7 94 aa9.11□□□□□ -0.95
SMCR8-201ENST00000406438 UBE2D3P61077 147 aa9.11□□□□□ -0.95
SMCR8-201ENST00000406438 CEMP1Q6PRD7 247 aaPredicted RBP9.11□□□□□ -0.95
SMCR8-201ENST00000406438 TNFRSF13BO14836 293 aaPredicted RBP9.1□□□□□ -0.95
SMCR8-201ENST00000406438 PIK3CD-AS1Q5SR53 167 aa9.1□□□□□ -0.95
SMCR8-201ENST00000406438 Q6ZSR3 168 aa9.1□□□□□ -0.95
SMCR8-201ENST00000406438 A0A0J9YXY3 114 aa9.1□□□□□ -0.95
SMCR8-201ENST00000406438 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.09□□□□□ -0.95
SMCR8-201ENST00000406438 Q6ZTI0 123 aa9.09□□□□□ -0.95
SMCR8-201ENST00000406438 TP53TG3Q9ULZ0 132 aa9.09□□□□□ -0.95
SMCR8-201ENST00000406438 C19orf71A6NCJ1 209 aa9.09□□□□□ -0.95
SMCR8-201ENST00000406438 ATP5EP2Q5VTU8 51 aa9.09□□□□□ -0.95
SMCR8-201ENST00000406438 SDIM1Q6ZPB5 146 aa9.09□□□□□ -0.95
SMCR8-201ENST00000406438 SPANXB1Q9NS25 103 aaPredicted RBP9.09□□□□□ -0.95
SMCR8-201ENST00000406438 ZNF706Q9Y5V0 76 aaPredicted RBP9.09□□□□□ -0.95
SMCR8-201ENST00000406438 FAM19A5Q7Z5A7 132 aaPredicted RBP9.09□□□□□ -0.95
SMCR8-201ENST00000406438 MIFP14174 115 aa9.09□□□□□ -0.95
SMCR8-201ENST00000406438 SERP1Q9Y6X1 66 aa9.08□□□□□ -0.96
SMCR8-201ENST00000406438 TEX49A0A1B0GTD5 131 aa9.08□□□□□ -0.96
SMCR8-201ENST00000406438 Q6YL49 198 aa9.08□□□□□ -0.96
SMCR8-201ENST00000406438 IGHV4-31P0DP07 118 aa9.08□□□□□ -0.96
SMCR8-201ENST00000406438 IBA57-AS1B1ANH7 110 aa9.08□□□□□ -0.96
SMCR8-201ENST00000406438 RNASE8Q8TDE3 154 aaKnown RBP9.08□□□□□ -0.96
SMCR8-201ENST00000406438 CCDC140Q96MF4 163 aa9.07□□□□□ -0.96
SMCR8-201ENST00000406438 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.07□□□□□ -0.96
SMCR8-201ENST00000406438 LINC01548A6NM66 108 aa9.07□□□□□ -0.96
SMCR8-201ENST00000406438 TTTY13Q9BZ97 58 aa9.07□□□□□ -0.96
SMCR8-201ENST00000406438 LRRC75A-AS1Q8N1F1 130 aa9.07□□□□□ -0.96
SMCR8-201ENST00000406438 NDUFV3P56181 108 aaKnown RBP9.06□□□□□ -0.96
SMCR8-201ENST00000406438 V9GYY9 64 aa9.06□□□□□ -0.96
SMCR8-201ENST00000406438 TRBV6-8A0A0A6YYG3 113 aa9.06□□□□□ -0.96
SMCR8-201ENST00000406438 DEFB114Q30KQ6 69 aa9.06□□□□□ -0.96
SMCR8-201ENST00000406438 ANKRD17O75179 2603 aaKnown RBP9.06□□□□□ -0.96
SMCR8-201ENST00000406438 UQCRQO14949 82 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms