RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 C4orf3Q8WVX3 66 aa13.24□□□□□ -0.29
SNED1-204ENST00000401884 C16orf74Q96GX8 76 aa13.24□□□□□ -0.29
SNED1-204ENST00000401884 HERV-K104P63124 156 aa13.24□□□□□ -0.29
SNED1-204ENST00000401884 VSIG2Q96IQ7 327 aa13.24□□□□□ -0.29
SNED1-204ENST00000401884 APOC4P55056 127 aa13.23□□□□□ -0.29
SNED1-204ENST00000401884 MRGPRG-AS1Q2M3A8 158 aa13.23□□□□□ -0.29
SNED1-204ENST00000401884 ACANP16112 2415 aa13.23□□□□□ -0.29
SNED1-204ENST00000401884 IGHV1-58A0A0C4DH39 117 aa13.23□□□□□ -0.29
SNED1-204ENST00000401884 NDUFA11Q86Y39 141 aa13.23□□□□□ -0.29
SNED1-204ENST00000401884 CITED2Q99967 270 aaPredicted RBP13.23□□□□□ -0.29
SNED1-204ENST00000401884 PIFOQ8TCI5 191 aa13.23□□□□□ -0.29
SNED1-204ENST00000401884 G3V4G9 280 aa13.23□□□□□ -0.29
SNED1-204ENST00000401884 PTH2Q96A98 100 aa13.23□□□□□ -0.29
SNED1-204ENST00000401884 LGALS9O00182 355 aa13.22□□□□□ -0.29
SNED1-204ENST00000401884 SOCS3O14543 225 aa13.22□□□□□ -0.29
SNED1-204ENST00000401884 Q6YL49 198 aa13.21□□□□□ -0.29
SNED1-204ENST00000401884 C15orf53Q8NAA6 179 aa13.21□□□□□ -0.29
SNED1-204ENST00000401884 ICOSQ9Y6W8 199 aa13.21□□□□□ -0.29
SNED1-204ENST00000401884 M0QY20 66 aa13.21□□□□□ -0.29
SNED1-204ENST00000401884 PSMB8P28062 276 aa13.21□□□□□ -0.29
SNED1-204ENST00000401884 FOXI1Q12951 378 aa13.21□□□□□ -0.29
SNED1-204ENST00000401884 Q6ZUT4 128 aa13.21□□□□□ -0.29
SNED1-204ENST00000401884 GYPEP15421 78 aa13.21□□□□□ -0.3
SNED1-204ENST00000401884 ZNF561-AS1K7EIQ3 104 aa13.2□□□□□ -0.3
SNED1-204ENST00000401884 ATP6V0E2Q8NHE4 81 aa13.2□□□□□ -0.3
SNED1-204ENST00000401884 TNRC6BQ9UPQ9 1833 aaKnown RBP13.2□□□□□ -0.3
SNED1-204ENST00000401884 CFAP54Q96N23 3096 aa13.2□□□□□ -0.3
SNED1-204ENST00000401884 C3orf56Q8N813 242 aa13.2□□□□□ -0.3
SNED1-204ENST00000401884 IGHV4-4A0A075B6R2 117 aa13.2□□□□□ -0.3
SNED1-204ENST00000401884 BAALC-AS2P0C853 105 aa13.19□□□□□ -0.3
SNED1-204ENST00000401884 SND1-IT1Q9HBX3 110 aa13.19□□□□□ -0.3
SNED1-204ENST00000401884 TRBV27A0A0K0K1C4 114 aa13.18□□□□□ -0.3
SNED1-204ENST00000401884 IGHV4-31P0DP07 118 aa13.18□□□□□ -0.3
SNED1-204ENST00000401884 KLLNB2CW77 178 aa13.18□□□□□ -0.3
SNED1-204ENST00000401884 TRBV10-1A0A0K0K1A3 114 aa13.18□□□□□ -0.3
SNED1-204ENST00000401884 DEFB114Q30KQ6 69 aa13.18□□□□□ -0.3
SNED1-204ENST00000401884 TMEM263Q8WUH6 116 aaKnown RBP13.17□□□□□ -0.3
SNED1-204ENST00000401884 RAI1Q7Z5J4 1906 aaPredicted RBP13.17□□□□□ -0.3
SNED1-204ENST00000401884 IGLV4-3A0A075B6K6 122 aa13.17□□□□□ -0.3
SNED1-204ENST00000401884 ZNF22P17026 224 aaPredicted RBP13.17□□□□□ -0.3
SNED1-204ENST00000401884 DEFB121Q5J5C9 76 aa13.17□□□□□ -0.3
SNED1-204ENST00000401884 Q6ZTI0 123 aa13.17□□□□□ -0.3
SNED1-204ENST00000401884 A0A0J9YXY3 114 aa13.16□□□□□ -0.3
SNED1-204ENST00000401884 AVPP01185 164 aa13.16□□□□□ -0.3
SNED1-204ENST00000401884 IGLV1-40P01703 118 aa13.16□□□□□ -0.3
SNED1-204ENST00000401884 DNAJC9-AS1A6NH13 148 aa13.16□□□□□ -0.3
SNED1-204ENST00000401884 ESM1Q9NQ30 184 aa13.16□□□□□ -0.3
SNED1-204ENST00000401884 POLR2KP53803 58 aaKnown RBP13.16□□□□□ -0.3
SNED1-204ENST00000401884 IGLV10-54A0A075B6I4 117 aa13.15□□□□□ -0.3
SNED1-204ENST00000401884 EDA2RQ9HAV5 297 aa13.15□□□□□ -0.3
SNED1-204ENST00000401884 CDKN2A-AS1Q9UH64 79 aa13.15□□□□□ -0.3
SNED1-204ENST00000401884 TRAV4A0A0B4J268 109 aa13.15□□□□□ -0.3
SNED1-204ENST00000401884 TRBV6-5A0A0K0K1A5 114 aa13.15□□□□□ -0.3
SNED1-204ENST00000401884 DCANP1Q8TF63 244 aa13.15□□□□□ -0.3
SNED1-204ENST00000401884 TRIOO75962 3097 aa13.14□□□□□ -0.31
SNED1-204ENST00000401884 TCL1BO95988 128 aa13.14□□□□□ -0.31
SNED1-204ENST00000401884 PROK1P58294 105 aa13.14□□□□□ -0.31
SNED1-204ENST00000401884 HHLA3Q9XRX5 114 aa13.14□□□□□ -0.31
SNED1-204ENST00000401884 COX8CQ7Z4L0 72 aa13.14□□□□□ -0.31
SNED1-204ENST00000401884 COX7B2Q8TF08 81 aa13.14□□□□□ -0.31
SNED1-204ENST00000401884 A0A096LNJ9 63 aa13.14□□□□□ -0.31
SNED1-204ENST00000401884 LINC00467Q9BRT7 94 aa13.13□□□□□ -0.31
SNED1-204ENST00000401884 TINCRA0A1B0GVN0 87 aa13.13□□□□□ -0.31
SNED1-204ENST00000401884 RBX1P62877 108 aa13.13□□□□□ -0.31
SNED1-204ENST00000401884 CLEC2BQ92478 149 aa13.13□□□□□ -0.31
SNED1-204ENST00000401884 WFDC11Q8NEX6 87 aa13.12□□□□□ -0.31
SNED1-204ENST00000401884 HIST2H2BCQ6DN03 193 aa13.12□□□□□ -0.31
SNED1-204ENST00000401884 CRYGDP07320 174 aa13.12□□□□□ -0.31
SNED1-204ENST00000401884 TRBV10-2A0A0K0K1G8 114 aa13.11□□□□□ -0.31
SNED1-204ENST00000401884 NFE4Q86UQ8 179 aa13.11□□□□□ -0.31
SNED1-204ENST00000401884 CRLF1O75462 422 aa13.11□□□□□ -0.31
SNED1-204ENST00000401884 RPL32P62910 135 aaKnown RBP13.11□□□□□ -0.31
SNED1-204ENST00000401884 TMEM223A0PJW6 202 aa13.11□□□□□ -0.31
SNED1-204ENST00000401884 C9orf66Q5T8R8 295 aa13.11□□□□□ -0.31
SNED1-204ENST00000401884 MIAQ16674 131 aa13.1□□□□□ -0.31
SNED1-204ENST00000401884 HIST2H2BDQ6DRA6 164 aa13.1□□□□□ -0.31
SNED1-204ENST00000401884 Q6ZSV7 163 aa13.1□□□□□ -0.31
SNED1-204ENST00000401884 MIR7-3HGQ8N6C7 128 aa13.1□□□□□ -0.31
SNED1-204ENST00000401884 ZMAT4Q9H898 229 aa13.1□□□□□ -0.31
SNED1-204ENST00000401884 ANKRD17O75179 2603 aaKnown RBP13.1□□□□□ -0.31
SNED1-204ENST00000401884 AGRNO00468 2067 aa13.1□□□□□ -0.31
SNED1-204ENST00000401884 CRYBA4P53673 196 aa13.1□□□□□ -0.31
SNED1-204ENST00000401884 PRM2P04554 102 aa13.09□□□□□ -0.31
SNED1-204ENST00000401884 C9orf153Q5TBE3 101 aa13.09□□□□□ -0.31
SNED1-204ENST00000401884 PSMG3-AS1Q96PY0 264 aa13.09□□□□□ -0.31
SNED1-204ENST00000401884 ATP5G1P05496 136 aa13.09□□□□□ -0.31
SNED1-204ENST00000401884 EDN2P20800 178 aa13.09□□□□□ -0.31
SNED1-204ENST00000401884 CFAP126Q5VTH2 177 aa13.09□□□□□ -0.31
SNED1-204ENST00000401884 LRRC75A-AS1Q8N1F1 130 aa13.09□□□□□ -0.31
SNED1-204ENST00000401884 UBL5Q9BZL1 73 aa13.09□□□□□ -0.31
SNED1-204ENST00000401884 ZNF702PQ9H963 129 aa13.09□□□□□ -0.31
SNED1-204ENST00000401884 PTPRBP23467 1997 aa13.09□□□□□ -0.31
SNED1-204ENST00000401884 A0A0B4J2C4 111 aa13.08□□□□□ -0.32
SNED1-204ENST00000401884 H0YGX0 51 aa13.08□□□□□ -0.32
SNED1-204ENST00000401884 H3BT86 120 aa13.08□□□□□ -0.32
SNED1-204ENST00000401884 DEFB4AO15263 64 aa13.08□□□□□ -0.32
SNED1-204ENST00000401884 SPANXB1Q9NS25 103 aaPredicted RBP13.08□□□□□ -0.32
SNED1-204ENST00000401884 COX7A2LO14548 114 aa13.08□□□□□ -0.32
SNED1-204ENST00000401884 RS1O15537 224 aa13.08□□□□□ -0.32
SNED1-204ENST00000401884 MRPL23Q16540 153 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms