RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 NDUFA11Q86Y39 141 aa12.54□□□□□ -0.4
SNRNP70-202ENST00000401730 NBPF19A0A087WUL8 3843 aa12.54□□□□□ -0.4
SNRNP70-202ENST00000401730 ITPR3Q14573 2671 aa12.54□□□□□ -0.4
SNRNP70-202ENST00000401730 TRAV8-3A0A0A6YYJ7 113 aa12.54□□□□□ -0.4
SNRNP70-202ENST00000401730 NXPH4O95158 308 aa12.53□□□□□ -0.4
SNRNP70-202ENST00000401730 ZFAND6Q6FIF0 208 aa12.53□□□□□ -0.4
SNRNP70-202ENST00000401730 C9orf85Q96MD7 179 aa12.53□□□□□ -0.4
SNRNP70-202ENST00000401730 PRSS2P07478 247 aa12.53□□□□□ -0.4
SNRNP70-202ENST00000401730 VCX2Q9H322 139 aa12.53□□□□□ -0.4
SNRNP70-202ENST00000401730 AKAP9Q99996 3911 aa12.52□□□□□ -0.4
SNRNP70-202ENST00000401730 TRBV27A0A0K0K1C4 114 aa12.52□□□□□ -0.4
SNRNP70-202ENST00000401730 Q6ZSN1 163 aa12.52□□□□□ -0.4
SNRNP70-202ENST00000401730 LGALS9O00182 355 aa12.52□□□□□ -0.41
SNRNP70-202ENST00000401730 CFC1BP0CG36 223 aa12.52□□□□□ -0.41
SNRNP70-202ENST00000401730 CFC1P0CG37 223 aa12.52□□□□□ -0.41
SNRNP70-202ENST00000401730 APCP25054 2843 aa12.52□□□□□ -0.41
SNRNP70-202ENST00000401730 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.51□□□□□ -0.41
SNRNP70-202ENST00000401730 IGKV2-29A2NJV5 120 aaPredicted RBP12.51□□□□□ -0.41
SNRNP70-202ENST00000401730 UBE2D1P51668 147 aa12.51□□□□□ -0.41
SNRNP70-202ENST00000401730 TMEM61Q8N0U2 210 aa12.51□□□□□ -0.41
SNRNP70-202ENST00000401730 LYRM7Q5U5X0 104 aa12.51□□□□□ -0.41
SNRNP70-202ENST00000401730 CD28P10747 220 aa12.51□□□□□ -0.41
SNRNP70-202ENST00000401730 UBE2E2Q96LR5 201 aa12.51□□□□□ -0.41
SNRNP70-202ENST00000401730 ERG28Q9UKR5 140 aa12.51□□□□□ -0.41
SNRNP70-202ENST00000401730 VPREB3Q9UKI3 123 aa12.5□□□□□ -0.41
SNRNP70-202ENST00000401730 A4D1N5 150 aa12.5□□□□□ -0.41
SNRNP70-202ENST00000401730 SLC25A20O43772 301 aa12.5□□□□□ -0.41
SNRNP70-202ENST00000401730 ZNF702PQ9H963 129 aa12.5□□□□□ -0.41
SNRNP70-202ENST00000401730 A0A0U1RRA0 63 aa12.49□□□□□ -0.41
SNRNP70-202ENST00000401730 RBMY1BA6NDE4 496 aaKnown RBP12.49□□□□□ -0.41
SNRNP70-202ENST00000401730 RBMY1EA6NEQ0 496 aaKnown RBP12.49□□□□□ -0.41
SNRNP70-202ENST00000401730 RBMY1DP0C7P1 496 aaKnown RBP12.49□□□□□ -0.41
SNRNP70-202ENST00000401730 C20orf203Q8NBC4 194 aa12.49□□□□□ -0.41
SNRNP70-202ENST00000401730 TMEM141Q96I45 108 aa12.49□□□□□ -0.41
SNRNP70-202ENST00000401730 XCL2Q9UBD3 114 aa12.49□□□□□ -0.41
SNRNP70-202ENST00000401730 ATP6V0E2Q8NHE4 81 aa12.49□□□□□ -0.41
SNRNP70-202ENST00000401730 LINC01587Q99440 93 aa12.49□□□□□ -0.41
SNRNP70-202ENST00000401730 TIMM17AQ99595 171 aa12.49□□□□□ -0.41
SNRNP70-202ENST00000401730 TRBV7-9A0A0J9YWB2 115 aa12.48□□□□□ -0.41
SNRNP70-202ENST00000401730 I3L3M4 83 aa12.48□□□□□ -0.41
SNRNP70-202ENST00000401730 NTN5Q8WTR8 489 aaPredicted RBP12.48□□□□□ -0.41
SNRNP70-202ENST00000401730 SNCGO76070 127 aa12.48□□□□□ -0.41
SNRNP70-202ENST00000401730 UBE2D3P61077 147 aa12.48□□□□□ -0.41
SNRNP70-202ENST00000401730 UBE2D2P62837 147 aa12.48□□□□□ -0.41
SNRNP70-202ENST00000401730 PRO1854Q9UHT4 67 aa12.48□□□□□ -0.41
SNRNP70-202ENST00000401730 TNFRSF18Q9Y5U5 241 aa12.48□□□□□ -0.41
SNRNP70-202ENST00000401730 IGLV4-3A0A075B6K6 122 aa12.48□□□□□ -0.41
SNRNP70-202ENST00000401730 IGHV3-53P01767 116 aa12.48□□□□□ -0.41
SNRNP70-202ENST00000401730 IGHV3-30P01768 117 aa12.48□□□□□ -0.41
SNRNP70-202ENST00000401730 IGHV3-30-5P0DP03 117 aa12.48□□□□□ -0.41
SNRNP70-202ENST00000401730 NBEAL2Q6ZNJ1 2754 aa12.47□□□□□ -0.41
SNRNP70-202ENST00000401730 ZNF22P17026 224 aaPredicted RBP12.47□□□□□ -0.41
SNRNP70-202ENST00000401730 MUSTN1Q8IVN3 82 aa12.47□□□□□ -0.41
SNRNP70-202ENST00000401730 C10orf126Q8N4M7 172 aa12.47□□□□□ -0.41
SNRNP70-202ENST00000401730 POM121L12Q8N7R1 296 aa12.47□□□□□ -0.41
SNRNP70-202ENST00000401730 BRI3O95415 125 aa12.47□□□□□ -0.41
SNRNP70-202ENST00000401730 GAGE2BQ13066 116 aa12.47□□□□□ -0.41
SNRNP70-202ENST00000401730 GAGE2EQ4V326 116 aa12.47□□□□□ -0.41
SNRNP70-202ENST00000401730 Q6ZSV7 163 aa12.47□□□□□ -0.41
SNRNP70-202ENST00000401730 DAND5Q8N907 189 aa12.47□□□□□ -0.41
SNRNP70-202ENST00000401730 GAGE2DQ9UEU5 116 aa12.47□□□□□ -0.41
SNRNP70-202ENST00000401730 HIVEP2P31629 2446 aa12.47□□□□□ -0.41
SNRNP70-202ENST00000401730 CRLF1O75462 422 aa12.46□□□□□ -0.41
SNRNP70-202ENST00000401730 HIST2H2BCQ6DN03 193 aa12.46□□□□□ -0.41
SNRNP70-202ENST00000401730 C3orf56Q8N813 242 aa12.46□□□□□ -0.41
SNRNP70-202ENST00000401730 TRAV4A0A0B4J268 109 aa12.46□□□□□ -0.41
SNRNP70-202ENST00000401730 DYNLRB2Q8TF09 96 aa12.46□□□□□ -0.41
SNRNP70-202ENST00000401730 BBC3Q96PG8 261 aaPredicted RBP12.46□□□□□ -0.41
SNRNP70-202ENST00000401730 TTC32Q5I0X7 151 aa12.46□□□□□ -0.42
SNRNP70-202ENST00000401730 PAPPA-AS1Q5QFB9 102 aa12.46□□□□□ -0.42
SNRNP70-202ENST00000401730 SETXQ7Z333 2677 aaKnown RBP12.45□□□□□ -0.42
SNRNP70-202ENST00000401730 RHODO00212 210 aa12.45□□□□□ -0.42
SNRNP70-202ENST00000401730 SLC25A29Q8N8R3 303 aa12.45□□□□□ -0.42
SNRNP70-202ENST00000401730 GAGE5Q13069 117 aa12.45□□□□□ -0.42
SNRNP70-202ENST00000401730 GAGE6Q13070 117 aa12.45□□□□□ -0.42
SNRNP70-202ENST00000401730 ZNF625Q96I27 306 aaPredicted RBP12.45□□□□□ -0.42
SNRNP70-202ENST00000401730 AMELXQ99217 191 aa12.45□□□□□ -0.42
SNRNP70-202ENST00000401730 TRGV11A0A075B6L2 103 aa12.44□□□□□ -0.42
SNRNP70-202ENST00000401730 TRBV6-5A0A0K0K1A5 114 aa12.44□□□□□ -0.42
SNRNP70-202ENST00000401730 TEX49A0A1B0GTD5 131 aa12.44□□□□□ -0.42
SNRNP70-202ENST00000401730 TMEM223A0PJW6 202 aa12.44□□□□□ -0.42
SNRNP70-202ENST00000401730 H3BMM0 161 aa12.44□□□□□ -0.42
SNRNP70-202ENST00000401730 EIF4EBP3O60516 100 aaPredicted RBP12.44□□□□□ -0.42
SNRNP70-202ENST00000401730 ELANEP08246 267 aa12.44□□□□□ -0.42
SNRNP70-202ENST00000401730 CCDC179H3BU77 68 aa12.43□□□□□ -0.42
SNRNP70-202ENST00000401730 IGHV4-31P0DP07 118 aa12.43□□□□□ -0.42
SNRNP70-202ENST00000401730 LINC01619G3V211 115 aa12.42□□□□□ -0.42
SNRNP70-202ENST00000401730 Q96MF0 132 aa12.42□□□□□ -0.42
SNRNP70-202ENST00000401730 IGHV3-30-3P0DP02 117 aa12.42□□□□□ -0.42
SNRNP70-202ENST00000401730 Q6YL49 198 aa12.42□□□□□ -0.42
SNRNP70-202ENST00000401730 NDUFA7O95182 113 aa12.41□□□□□ -0.42
SNRNP70-202ENST00000401730 NSUN5P1Q3KNT7 163 aa12.41□□□□□ -0.42
SNRNP70-202ENST00000401730 A0A096LNT2 108 aa12.41□□□□□ -0.42
SNRNP70-202ENST00000401730 TMEM262E9PQX1 116 aa12.41□□□□□ -0.42
SNRNP70-202ENST00000401730 TIMM21Q9BVV7 248 aa12.41□□□□□ -0.42
SNRNP70-202ENST00000401730 ITPR2Q14571 2701 aa12.41□□□□□ -0.42
SNRNP70-202ENST00000401730 RPL32P62910 135 aaKnown RBP12.4□□□□□ -0.42
SNRNP70-202ENST00000401730 RHOHQ15669 191 aa12.4□□□□□ -0.42
SNRNP70-202ENST00000401730 LINC00467Q9BRT7 94 aa12.4□□□□□ -0.42
SNRNP70-202ENST00000401730 LEPROTO15243 131 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms