RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 FAM231AP0DMU4 169 aa13.97□□□□□ -0.17
USP25-204ENST00000400183 FAM231CP0DMU5 169 aa13.97□□□□□ -0.17
USP25-204ENST00000400183 RBX1P62877 108 aa13.96□□□□□ -0.17
USP25-204ENST00000400183 C14orf177Q52M58 125 aa13.96□□□□□ -0.17
USP25-204ENST00000400183 GDF5OSQ5U4N7 250 aa13.96□□□□□ -0.17
USP25-204ENST00000400183 COL4A3Q01955 1670 aa13.96□□□□□ -0.18
USP25-204ENST00000400183 SMIM9A6NGZ8 99 aa13.96□□□□□ -0.18
USP25-204ENST00000400183 C19orf84I3L1E1 186 aa13.96□□□□□ -0.18
USP25-204ENST00000400183 C14orf132Q9NPU4 83 aa13.95□□□□□ -0.18
USP25-204ENST00000400183 J3KT08 172 aa13.95□□□□□ -0.18
USP25-204ENST00000400183 MLST8Q9BVC4 326 aa13.95□□□□□ -0.18
USP25-204ENST00000400183 REG3AQ06141 175 aa13.95□□□□□ -0.18
USP25-204ENST00000400183 ZNF295-AS1Q8N0V1 137 aa13.95□□□□□ -0.18
USP25-204ENST00000400183 LINC00269Q8N2A0 174 aa13.95□□□□□ -0.18
USP25-204ENST00000400183 DEFB114Q30KQ6 69 aa13.94□□□□□ -0.18
USP25-204ENST00000400183 FAM222AQ5U5X8 452 aa13.94□□□□□ -0.18
USP25-204ENST00000400183 PRORYQ9H606 182 aa13.94□□□□□ -0.18
USP25-204ENST00000400183 LYRM9A8MSI8 78 aa13.94□□□□□ -0.18
USP25-204ENST00000400183 RNF183Q96D59 192 aa13.94□□□□□ -0.18
USP25-204ENST00000400183 KIF26AQ9ULI4 1882 aaPredicted RBP13.94□□□□□ -0.18
USP25-204ENST00000400183 A0A0J9YXY3 114 aa13.94□□□□□ -0.18
USP25-204ENST00000400183 PRB2P02812 416 aaPredicted RBP13.94□□□□□ -0.18
USP25-204ENST00000400183 IGHV4-31P0DP07 118 aa13.94□□□□□ -0.18
USP25-204ENST00000400183 B9D2Q9BPU9 175 aa13.94□□□□□ -0.18
USP25-204ENST00000400183 Q6ZPA2 131 aa13.94□□□□□ -0.18
USP25-204ENST00000400183 CRYGBP07316 175 aa13.93□□□□□ -0.18
USP25-204ENST00000400183 HIST2H2BDQ6DRA6 164 aa13.93□□□□□ -0.18
USP25-204ENST00000400183 IGKV2-24A0A0C4DH68 120 aa13.93□□□□□ -0.18
USP25-204ENST00000400183 IGKV2D-26A0A0A0MRZ7 120 aa13.92□□□□□ -0.18
USP25-204ENST00000400183 WFDC11Q8NEX6 87 aa13.91□□□□□ -0.18
USP25-204ENST00000400183 EBI3Q14213 229 aa13.91□□□□□ -0.18
USP25-204ENST00000400183 H0Y9J4 135 aa13.91□□□□□ -0.18
USP25-204ENST00000400183 DSCAML1Q8TD84 2053 aa13.9□□□□□ -0.18
USP25-204ENST00000400183 C1orf229Q6ZS94 237 aaPredicted RBP13.9□□□□□ -0.18
USP25-204ENST00000400183 C22orf34Q6ZV56 151 aa13.9□□□□□ -0.18
USP25-204ENST00000400183 MT-ATP8P03928 68 aa13.9□□□□□ -0.18
USP25-204ENST00000400183 LINC00467Q9BRT7 94 aa13.9□□□□□ -0.18
USP25-204ENST00000400183 NAV2Q8IVL1 2488 aa13.9□□□□□ -0.18
USP25-204ENST00000400183 TCL1BO95988 128 aa13.9□□□□□ -0.18
USP25-204ENST00000400183 H7C423 109 aa13.89□□□□□ -0.19
USP25-204ENST00000400183 CHCHD10Q8WYQ3 142 aaPredicted RBP13.89□□□□□ -0.19
USP25-204ENST00000400183 HIGD2AQ9BW72 106 aa13.89□□□□□ -0.19
USP25-204ENST00000400183 CDKN2A-AS1Q9UH64 79 aa13.89□□□□□ -0.19
USP25-204ENST00000400183 HIVEP3Q5T1R4 2406 aa13.89□□□□□ -0.19
USP25-204ENST00000400183 LINC00643Q86TS7 51 aa13.89□□□□□ -0.19
USP25-204ENST00000400183 SPANXB1Q9NS25 103 aaPredicted RBP13.88□□□□□ -0.19
USP25-204ENST00000400183 NAV3Q8IVL0 2385 aa13.88□□□□□ -0.19
USP25-204ENST00000400183 CCDC168Q8NDH2 2452 aa13.88□□□□□ -0.19
USP25-204ENST00000400183 EIF4EBP1Q13541 118 aaPredicted RBP13.88□□□□□ -0.19
USP25-204ENST00000400183 NEXN-AS1Q8NBZ9 246 aa13.88□□□□□ -0.19
USP25-204ENST00000400183 C20orf173Q96LM9 149 aa13.88□□□□□ -0.19
USP25-204ENST00000400183 MBD6Q96DN6 1003 aa13.87□□□□□ -0.19
USP25-204ENST00000400183 ZFAND3Q9H8U3 227 aa13.87□□□□□ -0.19
USP25-204ENST00000400183 OBSL1O75147 1896 aa13.87□□□□□ -0.19
USP25-204ENST00000400183 CRIP3Q6Q6R5 217 aa13.87□□□□□ -0.19
USP25-204ENST00000400183 C2CD3Q4AC94 2353 aa13.86□□□□□ -0.19
USP25-204ENST00000400183 LY6LH3BQJ8 138 aa13.86□□□□□ -0.19
USP25-204ENST00000400183 BPY2O14599 106 aa13.86□□□□□ -0.19
USP25-204ENST00000400183 DEFB131BA0A096LNP1 70 aa13.86□□□□□ -0.19
USP25-204ENST00000400183 IGLV4-3A0A075B6K6 122 aa13.85□□□□□ -0.19
USP25-204ENST00000400183 CRYGDP07320 174 aa13.85□□□□□ -0.19
USP25-204ENST00000400183 HILS1P60008 231 aa13.85□□□□□ -0.19
USP25-204ENST00000400183 ZNF22P17026 224 aaPredicted RBP13.85□□□□□ -0.19
USP25-204ENST00000400183 ADAMTS9Q9P2N4 1935 aa13.85□□□□□ -0.19
USP25-204ENST00000400183 Q6ZSV7 163 aa13.84□□□□□ -0.19
USP25-204ENST00000400183 FAM110AQ9BQ89 295 aa13.84□□□□□ -0.19
USP25-204ENST00000400183 DOPEY1Q5JWR5 2465 aa13.84□□□□□ -0.19
USP25-204ENST00000400183 NDUFV3P56181 108 aaKnown RBP13.84□□□□□ -0.19
USP25-204ENST00000400183 IBA57-AS1B1ANH7 110 aa13.83□□□□□ -0.2
USP25-204ENST00000400183 TNRC6BQ9UPQ9 1833 aaKnown RBP13.83□□□□□ -0.2
USP25-204ENST00000400183 NDUFC2O95298 119 aa13.82□□□□□ -0.2
USP25-204ENST00000400183 CFAP126Q5VTH2 177 aa13.82□□□□□ -0.2
USP25-204ENST00000400183 TMEM223A0PJW6 202 aa13.82□□□□□ -0.2
USP25-204ENST00000400183 M0QY20 66 aa13.82□□□□□ -0.2
USP25-204ENST00000400183 MIFP14174 115 aa13.82□□□□□ -0.2
USP25-204ENST00000400183 C2orf16Q68DN1 1984 aa13.82□□□□□ -0.2
USP25-204ENST00000400183 INAFM1C9JVW0 142 aa13.82□□□□□ -0.2
USP25-204ENST00000400183 TRBV6-4A0A1B0GX49 114 aa13.81□□□□□ -0.2
USP25-204ENST00000400183 SPATA25Q9BR10 227 aa13.81□□□□□ -0.2
USP25-204ENST00000400183 TRBV6-8A0A0A6YYG3 113 aa13.81□□□□□ -0.2
USP25-204ENST00000400183 C11orf71Q6IPW1 123 aa13.81□□□□□ -0.2
USP25-204ENST00000400183 MED12LQ86YW9 2145 aa13.8□□□□□ -0.2
USP25-204ENST00000400183 PLXNB1O43157 2135 aa13.8□□□□□ -0.2
USP25-204ENST00000400183 UPK3BQ9BT76 320 aa13.8□□□□□ -0.2
USP25-204ENST00000400183 CRIP1P50238 77 aa13.8□□□□□ -0.2
USP25-204ENST00000400183 ABCA2Q9BZC7 2435 aa13.8□□□□□ -0.2
USP25-204ENST00000400183 LINC00308Q8TCZ7 52 aa13.79□□□□□ -0.2
USP25-204ENST00000400183 FAM19A1Q7Z5A9 133 aa13.79□□□□□ -0.2
USP25-204ENST00000400183 SHISA2Q6UWI4 295 aa13.79□□□□□ -0.2
USP25-204ENST00000400183 IGKV4-1P06312 121 aa13.78□□□□□ -0.2
USP25-204ENST00000400183 LINC00482Q8N8I6 264 aa13.78□□□□□ -0.2
USP25-204ENST00000400183 KIR2DL5BQ8NHK3 375 aa13.78□□□□□ -0.2
USP25-204ENST00000400183 PIEZO1Q92508 2521 aa13.78□□□□□ -0.2
USP25-204ENST00000400183 TMEM131Q92545 1883 aa13.78□□□□□ -0.2
USP25-204ENST00000400183 TRAV23DV6A0A075B6W5 121 aa13.78□□□□□ -0.2
USP25-204ENST00000400183 TEX49A0A1B0GTD5 131 aa13.77□□□□□ -0.2
USP25-204ENST00000400183 DSCAMO60469 2012 aa13.77□□□□□ -0.2
USP25-204ENST00000400183 A0A087WZ39 114 aa13.77□□□□□ -0.2
USP25-204ENST00000400183 C10orf99Q6UWK7 81 aa13.77□□□□□ -0.21
USP25-204ENST00000400183 A0A096LNI7 61 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms