RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 PRRC2AP48634 2157 aaKnown RBP6.43□□□□□ -1.38
CHD8-201ENST00000399982 IGLV11-55A0A075B6I3 123 aa6.43□□□□□ -1.38
CHD8-201ENST00000399982 CRYGDP07320 174 aa6.43□□□□□ -1.38
CHD8-201ENST00000399982 PATE2Q6UY27 113 aa6.43□□□□□ -1.38
CHD8-201ENST00000399982 TRAV7A0A075B6U4 112 aa6.43□□□□□ -1.38
CHD8-201ENST00000399982 EPOPA6NHQ4 379 aa6.43□□□□□ -1.38
CHD8-201ENST00000399982 CCDC179H3BU77 68 aa6.43□□□□□ -1.38
CHD8-201ENST00000399982 SPINK1P00995 79 aa6.43□□□□□ -1.38
CHD8-201ENST00000399982 TMEM89A2RUT3 159 aa6.43□□□□□ -1.38
CHD8-201ENST00000399982 XGP55808 180 aa6.43□□□□□ -1.38
CHD8-201ENST00000399982 RPS28P62857 69 aaKnown RBP6.43□□□□□ -1.38
CHD8-201ENST00000399982 P0C879 139 aa6.43□□□□□ -1.38
CHD8-201ENST00000399982 USF3Q68DE3 2245 aa6.43□□□□□ -1.38
CHD8-201ENST00000399982 TMEM105Q8N8V8 129 aa6.42□□□□□ -1.38
CHD8-201ENST00000399982 IGF1P05019 195 aa6.42□□□□□ -1.38
CHD8-201ENST00000399982 VPREB1P12018 145 aa6.42□□□□□ -1.38
CHD8-201ENST00000399982 C2orf91Q6ZV80 131 aa6.42□□□□□ -1.38
CHD8-201ENST00000399982 NRGNQ92686 78 aa6.42□□□□□ -1.38
CHD8-201ENST00000399982 TICRRQ7Z2Z1 1910 aa6.42□□□□□ -1.38
CHD8-201ENST00000399982 C11orf45Q8TAV5 145 aa6.42□□□□□ -1.38
CHD8-201ENST00000399982 C2orf16Q68DN1 1984 aa6.42□□□□□ -1.38
CHD8-201ENST00000399982 IBA57-AS1B1ANH7 110 aa6.42□□□□□ -1.38
CHD8-201ENST00000399982 M0R2N4 97 aa6.42□□□□□ -1.38
CHD8-201ENST00000399982 RPL39P62891 51 aaKnown RBP6.42□□□□□ -1.38
CHD8-201ENST00000399982 PRR14LQ5THK1 2151 aa6.42□□□□□ -1.38
CHD8-201ENST00000399982 VWA8A3KMH1 1905 aa6.42□□□□□ -1.38
CHD8-201ENST00000399982 K7EIM0 57 aa6.42□□□□□ -1.38
CHD8-201ENST00000399982 SLPIP03973 132 aa6.42□□□□□ -1.38
CHD8-201ENST00000399982 Q6ZR03 302 aa6.42□□□□□ -1.38
CHD8-201ENST00000399982 VPREB3Q9UKI3 123 aa6.42□□□□□ -1.38
CHD8-201ENST00000399982 SMAD5-AS1Q9Y6J3 95 aa6.41□□□□□ -1.38
CHD8-201ENST00000399982 NANOS2P60321 138 aaKnown RBP6.41□□□□□ -1.38
CHD8-201ENST00000399982 WFDC10AQ9H1F0 79 aa6.41□□□□□ -1.38
CHD8-201ENST00000399982 IGLV2-8P01709 118 aa6.41□□□□□ -1.38
CHD8-201ENST00000399982 LINC00694P0DN24 101 aa6.41□□□□□ -1.38
CHD8-201ENST00000399982 TPSG1Q9NRR2 321 aa6.41□□□□□ -1.38
CHD8-201ENST00000399982 FRMPD3Q5JV73 1810 aa6.41□□□□□ -1.38
CHD8-201ENST00000399982 TMEM223A0PJW6 202 aa6.41□□□□□ -1.38
CHD8-201ENST00000399982 TRIAP1O43715 76 aa6.41□□□□□ -1.38
CHD8-201ENST00000399982 PYGO1Q9Y3Y4 419 aa6.41□□□□□ -1.38
CHD8-201ENST00000399982 ROS1P08922 2347 aa6.4□□□□□ -1.38
CHD8-201ENST00000399982 TTTY13Q9BZ97 58 aa6.4□□□□□ -1.38
CHD8-201ENST00000399982 WT1P19544 449 aaPredicted RBP6.4□□□□□ -1.39
CHD8-201ENST00000399982 MRPS12O15235 138 aaKnown RBP6.4□□□□□ -1.39
CHD8-201ENST00000399982 NFE4Q86UQ8 179 aa6.4□□□□□ -1.39
CHD8-201ENST00000399982 DCANP1Q8TF63 244 aa6.4□□□□□ -1.39
CHD8-201ENST00000399982 TRBV7-6A0A0J9YX20 115 aa6.39□□□□□ -1.39
CHD8-201ENST00000399982 PLXNB1O43157 2135 aa6.39□□□□□ -1.39
CHD8-201ENST00000399982 PRORYQ9H606 182 aa6.39□□□□□ -1.39
CHD8-201ENST00000399982 TNS1Q9HBL0 1735 aaKnown RBP6.39□□□□□ -1.39
CHD8-201ENST00000399982 LINC00269Q8N2A0 174 aa6.39□□□□□ -1.39
CHD8-201ENST00000399982 HCFC1P51610 2035 aa6.39□□□□□ -1.39
CHD8-201ENST00000399982 POM121L12Q8N7R1 296 aa6.39□□□□□ -1.39
CHD8-201ENST00000399982 IGLV2-18A0A075B6J9 118 aa6.39□□□□□ -1.39
CHD8-201ENST00000399982 LY6G6EA0A0G2JKS1 128 aa6.39□□□□□ -1.39
CHD8-201ENST00000399982 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.39□□□□□ -1.39
CHD8-201ENST00000399982 MSRB1Q9NZV6 116 aa6.39□□□□□ -1.39
CHD8-201ENST00000399982 NRACQ8N912 160 aa6.39□□□□□ -1.39
CHD8-201ENST00000399982 CIRBP-AS1Q8TBR5 109 aa6.39□□□□□ -1.39
CHD8-201ENST00000399982 TP53TG3Q9ULZ0 132 aa6.39□□□□□ -1.39
CHD8-201ENST00000399982 TET2Q6N021 2002 aaPredicted RBP6.39□□□□□ -1.39
CHD8-201ENST00000399982 A6NDX4 124 aa6.39□□□□□ -1.39
CHD8-201ENST00000399982 SPINT4Q6UDR6 99 aa6.38□□□□□ -1.39
CHD8-201ENST00000399982 BCE1O60756 84 aa6.38□□□□□ -1.39
CHD8-201ENST00000399982 ZFP36P26651 326 aaKnown RBP6.38□□□□□ -1.39
CHD8-201ENST00000399982 LINC00308Q8TCZ7 52 aa6.38□□□□□ -1.39
CHD8-201ENST00000399982 ZNF524Q96C55 264 aa6.38□□□□□ -1.39
CHD8-201ENST00000399982 ZNF706Q9Y5V0 76 aaPredicted RBP6.38□□□□□ -1.39
CHD8-201ENST00000399982 AJUBAQ96IF1 538 aa6.38□□□□□ -1.39
CHD8-201ENST00000399982 MIFP14174 115 aa6.38□□□□□ -1.39
CHD8-201ENST00000399982 CCKP06307 115 aa6.38□□□□□ -1.39
CHD8-201ENST00000399982 MED13LQ71F56 2210 aa6.38□□□□□ -1.39
CHD8-201ENST00000399982 COL4A1P02462 1669 aa6.37□□□□□ -1.39
CHD8-201ENST00000399982 IGKV2-28A0A075B6P5 120 aa6.37□□□□□ -1.39
CHD8-201ENST00000399982 LY6G6CO95867 125 aa6.37□□□□□ -1.39
CHD8-201ENST00000399982 IGKV2D-28P01615 120 aa6.37□□□□□ -1.39
CHD8-201ENST00000399982 DNAJC9-AS1A6NH13 148 aa6.37□□□□□ -1.39
CHD8-201ENST00000399982 ESRGQ1W209 222 aa6.37□□□□□ -1.39
CHD8-201ENST00000399982 IGFL3Q6UXB1 125 aa6.37□□□□□ -1.39
CHD8-201ENST00000399982 LOC107984640A0A0U1RRK4 108 aa6.37□□□□□ -1.39
CHD8-201ENST00000399982 TANC1Q9C0D5 1861 aa6.37□□□□□ -1.39
CHD8-201ENST00000399982 CACNA1HO95180 2353 aa6.37□□□□□ -1.39
CHD8-201ENST00000399982 ATG2AQ2TAZ0 1938 aa6.37□□□□□ -1.39
CHD8-201ENST00000399982 TRBV6-5A0A0K0K1A5 114 aa6.37□□□□□ -1.39
CHD8-201ENST00000399982 ATRXP46100 2492 aa6.37□□□□□ -1.39
CHD8-201ENST00000399982 C11orf53Q8IXP5 236 aa6.36□□□□□ -1.39
CHD8-201ENST00000399982 LINC00574Q9H8X3 128 aa6.36□□□□□ -1.39
CHD8-201ENST00000399982 ODF3L1Q8IXM7 274 aa6.36□□□□□ -1.39
CHD8-201ENST00000399982 EML5Q05BV3 1969 aa6.36□□□□□ -1.39
CHD8-201ENST00000399982 GDF5OSQ5U4N7 250 aa6.36□□□□□ -1.39
CHD8-201ENST00000399982 C22orf34Q6ZV56 151 aa6.36□□□□□ -1.39
CHD8-201ENST00000399982 WDR90Q96KV7 1748 aa6.36□□□□□ -1.39
CHD8-201ENST00000399982 ZNF22P17026 224 aaPredicted RBP6.36□□□□□ -1.39
CHD8-201ENST00000399982 REG3AQ06141 175 aa6.35□□□□□ -1.39
CHD8-201ENST00000399982 HILS1P60008 231 aa6.35□□□□□ -1.39
CHD8-201ENST00000399982 PRLHP81277 87 aa6.35□□□□□ -1.39
CHD8-201ENST00000399982 IGLV2-14P01704 120 aa6.35□□□□□ -1.39
CHD8-201ENST00000399982 TRBV7-7A0A0K0K1E9 115 aa6.35□□□□□ -1.39
CHD8-201ENST00000399982 MALRD1Q5VYJ5 2156 aa6.35□□□□□ -1.39
CHD8-201ENST00000399982 TRBV10-3A0A0K0K1G6 114 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms