RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 Q6JHZ5 121 aa6.67□□□□□ -1.34
CACNA1C-220ENST00000399655 COL9A3Q14050 684 aaPredicted RBP6.66□□□□□ -1.34
CACNA1C-220ENST00000399655 LINC00269Q8N2A0 174 aa6.66□□□□□ -1.34
CACNA1C-220ENST00000399655 TRBV7-7A0A0K0K1E9 115 aa6.66□□□□□ -1.34
CACNA1C-220ENST00000399655 IGKV1-16P04430 117 aa6.66□□□□□ -1.34
CACNA1C-220ENST00000399655 SHANK3Q9BYB0 1731 aa6.66□□□□□ -1.34
CACNA1C-220ENST00000399655 ADAMTSL1Q8N6G6 1762 aa6.66□□□□□ -1.34
CACNA1C-220ENST00000399655 LST1O00453 97 aa6.66□□□□□ -1.34
CACNA1C-220ENST00000399655 LINC01554Q52M75 96 aa6.66□□□□□ -1.34
CACNA1C-220ENST00000399655 C10orf91Q5T1B1 145 aa6.66□□□□□ -1.34
CACNA1C-220ENST00000399655 RAI1Q7Z5J4 1906 aaPredicted RBP6.66□□□□□ -1.34
CACNA1C-220ENST00000399655 Q6ZRM9 215 aa6.66□□□□□ -1.34
CACNA1C-220ENST00000399655 DCANP1Q8TF63 244 aa6.66□□□□□ -1.34
CACNA1C-220ENST00000399655 CCL24O00175 119 aa6.65□□□□□ -1.34
CACNA1C-220ENST00000399655 IGLV3-21P80748 117 aaPredicted RBP6.65□□□□□ -1.34
CACNA1C-220ENST00000399655 ZNF726P1Q15940 193 aa6.65□□□□□ -1.34
CACNA1C-220ENST00000399655 FAM19A5Q7Z5A7 132 aaPredicted RBP6.65□□□□□ -1.34
CACNA1C-220ENST00000399655 IGKV1D-8A0A087WSZ0 117 aa6.65□□□□□ -1.34
CACNA1C-220ENST00000399655 WIPF3A6NGB9 483 aa6.65□□□□□ -1.34
CACNA1C-220ENST00000399655 KIAA1671Q9BY89 1806 aa6.65□□□□□ -1.34
CACNA1C-220ENST00000399655 ADCYAP1P18509 176 aa6.65□□□□□ -1.34
CACNA1C-220ENST00000399655 ZNF837Q96EG3 531 aaPredicted RBP6.65□□□□□ -1.34
CACNA1C-220ENST00000399655 CRIPTQ9P021 101 aa6.65□□□□□ -1.35
CACNA1C-220ENST00000399655 KLK12Q9UKR0 248 aa6.65□□□□□ -1.35
CACNA1C-220ENST00000399655 KAAG1Q9UBP8 84 aa6.65□□□□□ -1.35
CACNA1C-220ENST00000399655 PRR31Q5SQ13 230 aa6.65□□□□□ -1.35
CACNA1C-220ENST00000399655 LILRA6Q6PI73 481 aa6.65□□□□□ -1.35
CACNA1C-220ENST00000399655 C9orf106Q8NAJ2 232 aa6.65□□□□□ -1.35
CACNA1C-220ENST00000399655 CYYR1Q96J86 154 aa6.65□□□□□ -1.35
CACNA1C-220ENST00000399655 TRIAP1O43715 76 aa6.64□□□□□ -1.35
CACNA1C-220ENST00000399655 ZNF833PQ6ZTB9 187 aa6.64□□□□□ -1.35
CACNA1C-220ENST00000399655 GP9P14770 177 aa6.64□□□□□ -1.35
CACNA1C-220ENST00000399655 SOSTDC1Q6X4U4 206 aa6.64□□□□□ -1.35
CACNA1C-220ENST00000399655 PLAC8L1A1L4L8 177 aa6.64□□□□□ -1.35
CACNA1C-220ENST00000399655 LINC01548A6NM66 108 aa6.64□□□□□ -1.35
CACNA1C-220ENST00000399655 LINC00473A8K010 186 aa6.64□□□□□ -1.35
CACNA1C-220ENST00000399655 SAP25Q8TEE9 199 aa6.64□□□□□ -1.35
CACNA1C-220ENST00000399655 LINC00467Q9BRT7 94 aa6.64□□□□□ -1.35
CACNA1C-220ENST00000399655 PYGO1Q9Y3Y4 419 aa6.64□□□□□ -1.35
CACNA1C-220ENST00000399655 CRYGAP11844 174 aa6.64□□□□□ -1.35
CACNA1C-220ENST00000399655 IGLV3-32A0A0A0MS00 114 aa6.64□□□□□ -1.35
CACNA1C-220ENST00000399655 A0A0J9YXV3 536 aa6.64□□□□□ -1.35
CACNA1C-220ENST00000399655 RNF144BQ7Z419 303 aa6.64□□□□□ -1.35
CACNA1C-220ENST00000399655 IGKV2-24A0A0C4DH68 120 aa6.63□□□□□ -1.35
CACNA1C-220ENST00000399655 FNDC1Q4ZHG4 1894 aaPredicted RBP6.63□□□□□ -1.35
CACNA1C-220ENST00000399655 HILS1P60008 231 aa6.63□□□□□ -1.35
CACNA1C-220ENST00000399655 Q6ZS92 163 aa6.63□□□□□ -1.35
CACNA1C-220ENST00000399655 RPL39LQ96EH5 51 aaKnown RBP6.63□□□□□ -1.35
CACNA1C-220ENST00000399655 LINC00208Q96KT6 92 aa6.63□□□□□ -1.35
CACNA1C-220ENST00000399655 VPREB3Q9UKI3 123 aa6.63□□□□□ -1.35
CACNA1C-220ENST00000399655 INSL3P51460 131 aa6.63□□□□□ -1.35
CACNA1C-220ENST00000399655 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.63□□□□□ -1.35
CACNA1C-220ENST00000399655 IGKV1-8A0A0C4DH67 115 aa6.63□□□□□ -1.35
CACNA1C-220ENST00000399655 LOC107984640A0A0U1RRK4 108 aa6.63□□□□□ -1.35
CACNA1C-220ENST00000399655 PLA2G2FQ9BZM2 168 aa6.63□□□□□ -1.35
CACNA1C-220ENST00000399655 LINC00526Q96FQ7 95 aa6.63□□□□□ -1.35
CACNA1C-220ENST00000399655 NRXN2Q9P2S2 1712 aa6.62□□□□□ -1.35
CACNA1C-220ENST00000399655 ZFAND2AQ8N6M9 145 aa6.62□□□□□ -1.35
CACNA1C-220ENST00000399655 LINC01465Q8N7H1 131 aa6.62□□□□□ -1.35
CACNA1C-220ENST00000399655 SPRY2O43597 315 aa6.62□□□□□ -1.35
CACNA1C-220ENST00000399655 TP53AIP1Q9HCN2 124 aa6.62□□□□□ -1.35
CACNA1C-220ENST00000399655 IGKV1D-17A0A075B6S4 117 aa6.62□□□□□ -1.35
CACNA1C-220ENST00000399655 PRO0255Q9UI72 69 aa6.62□□□□□ -1.35
CACNA1C-220ENST00000399655 A6NDX4 124 aa6.61□□□□□ -1.35
CACNA1C-220ENST00000399655 IGKV1-17P01599 117 aa6.61□□□□□ -1.35
CACNA1C-220ENST00000399655 RFPL3SP0C7P2 107 aa6.61□□□□□ -1.35
CACNA1C-220ENST00000399655 CCDC179H3BU77 68 aa6.61□□□□□ -1.35
CACNA1C-220ENST00000399655 RNASE3P12724 160 aaKnown RBP6.61□□□□□ -1.35
CACNA1C-220ENST00000399655 IGLV2-23P01705 113 aa6.61□□□□□ -1.35
CACNA1C-220ENST00000399655 RPL28P46779 137 aaKnown RBP6.61□□□□□ -1.35
CACNA1C-220ENST00000399655 RSPO4Q2I0M5 234 aaPredicted RBP6.61□□□□□ -1.35
CACNA1C-220ENST00000399655 EDN2P20800 178 aa6.61□□□□□ -1.35
CACNA1C-220ENST00000399655 H0Y9P7 68 aa6.61□□□□□ -1.35
CACNA1C-220ENST00000399655 FAM120AOSQ5T036 256 aa6.61□□□□□ -1.35
CACNA1C-220ENST00000399655 SBSPONQ8IVN8 264 aa6.6□□□□□ -1.35
CACNA1C-220ENST00000399655 COL8A2P25067 703 aa6.6□□□□□ -1.35
CACNA1C-220ENST00000399655 XAGE1AQ9HD64 81 aa6.6□□□□□ -1.35
CACNA1C-220ENST00000399655 A0A096LNI7 61 aa6.6□□□□□ -1.35
CACNA1C-220ENST00000399655 A8MZ25 164 aa6.6□□□□□ -1.35
CACNA1C-220ENST00000399655 PRLHP81277 87 aa6.6□□□□□ -1.35
CACNA1C-220ENST00000399655 QRFPP83859 136 aa6.6□□□□□ -1.35
CACNA1C-220ENST00000399655 REG3AQ06141 175 aa6.6□□□□□ -1.35
CACNA1C-220ENST00000399655 CSRP2Q16527 193 aa6.6□□□□□ -1.35
CACNA1C-220ENST00000399655 IGKV1-12A0A0C4DH73 117 aa6.6□□□□□ -1.35
CACNA1C-220ENST00000399655 LINC00114Q6XXX2 140 aa6.6□□□□□ -1.35
CACNA1C-220ENST00000399655 GNRH2O43555 120 aa6.6□□□□□ -1.35
CACNA1C-220ENST00000399655 BPESC1Q9GZL8 116 aa6.6□□□□□ -1.35
CACNA1C-220ENST00000399655 SLC22A18ASQ8N1D0 253 aa6.59□□□□□ -1.35
CACNA1C-220ENST00000399655 SMAD5-AS1Q9Y6J3 95 aa6.59□□□□□ -1.35
CACNA1C-220ENST00000399655 NRGNQ92686 78 aa6.59□□□□□ -1.35
CACNA1C-220ENST00000399655 Q8N6K4 173 aa6.59□□□□□ -1.35
CACNA1C-220ENST00000399655 PATE2Q6UY27 113 aa6.59□□□□□ -1.35
CACNA1C-220ENST00000399655 ZNF702PQ9H963 129 aa6.59□□□□□ -1.35
CACNA1C-220ENST00000399655 IGHV7-81A0A0B4J1V7 117 aa6.59□□□□□ -1.35
CACNA1C-220ENST00000399655 ATP11AUNQ6ZP68 121 aa6.59□□□□□ -1.35
CACNA1C-220ENST00000399655 SMIM10L1P0DMW3 83 aa6.59□□□□□ -1.35
CACNA1C-220ENST00000399655 BEAN1Q3B7T3 259 aa6.59□□□□□ -1.35
CACNA1C-220ENST00000399655 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.59□□□□□ -1.35
CACNA1C-220ENST00000399655 SMIM10Q96HG1 83 aa6.59□□□□□ -1.35
CACNA1C-220ENST00000399655 ABCA12Q86UK0 2595 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms