RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 TRBV6-8A0A0A6YYG3 113 aa9.24□□□□□ -0.93
CACNA1C-219ENST00000399649 LINC00322Q6ZN03 302 aaPredicted RBP9.24□□□□□ -0.93
CACNA1C-219ENST00000399649 CDKN2A-AS1Q9UH64 79 aa9.24□□□□□ -0.93
CACNA1C-219ENST00000399649 TRAV10A0A0B4J240 114 aa9.23□□□□□ -0.93
CACNA1C-219ENST00000399649 DEFB114Q30KQ6 69 aa9.23□□□□□ -0.93
CACNA1C-219ENST00000399649 XAGE1AQ9HD64 81 aa9.23□□□□□ -0.93
CACNA1C-219ENST00000399649 IGHV4-31P0DP07 118 aa9.23□□□□□ -0.93
CACNA1C-219ENST00000399649 IGLV4-3A0A075B6K6 122 aa9.23□□□□□ -0.93
CACNA1C-219ENST00000399649 CFAP126Q5VTH2 177 aa9.23□□□□□ -0.93
CACNA1C-219ENST00000399649 WFDC13Q8IUB5 93 aa9.23□□□□□ -0.93
CACNA1C-219ENST00000399649 IGKV2-28A0A075B6P5 120 aa9.23□□□□□ -0.93
CACNA1C-219ENST00000399649 LY6LH3BQJ8 138 aa9.23□□□□□ -0.93
CACNA1C-219ENST00000399649 IGKV2D-28P01615 120 aa9.23□□□□□ -0.93
CACNA1C-219ENST00000399649 PRORYQ9H606 182 aa9.23□□□□□ -0.93
CACNA1C-219ENST00000399649 PLA2G2AP14555 144 aa9.22□□□□□ -0.93
CACNA1C-219ENST00000399649 SNURFQ9Y675 71 aa9.22□□□□□ -0.93
CACNA1C-219ENST00000399649 C20orf173Q96LM9 149 aa9.22□□□□□ -0.93
CACNA1C-219ENST00000399649 FRMD6-AS1P0C7T7 363 aa9.22□□□□□ -0.93
CACNA1C-219ENST00000399649 OBSL1O75147 1896 aa9.22□□□□□ -0.93
CACNA1C-219ENST00000399649 DOCK8Q8NF50 2099 aa9.22□□□□□ -0.93
CACNA1C-219ENST00000399649 MED12Q93074 2177 aa9.22□□□□□ -0.93
CACNA1C-219ENST00000399649 ODF3BA8MYP8 253 aa9.22□□□□□ -0.93
CACNA1C-219ENST00000399649 IGHV4-30-4P0DP06 118 aa9.22□□□□□ -0.93
CACNA1C-219ENST00000399649 ZNF22P17026 224 aaPredicted RBP9.22□□□□□ -0.93
CACNA1C-219ENST00000399649 A0A1B0GXF2 115 aa9.22□□□□□ -0.93
CACNA1C-219ENST00000399649 IGLV9-49A0A0B4J1Y8 123 aa9.21□□□□□ -0.93
CACNA1C-219ENST00000399649 TRBV30A0A0K0K1B3 111 aa9.21□□□□□ -0.93
CACNA1C-219ENST00000399649 M0R378 163 aa9.21□□□□□ -0.93
CACNA1C-219ENST00000399649 TRIAP1O43715 76 aa9.21□□□□□ -0.93
CACNA1C-219ENST00000399649 UBE2D2P62837 147 aa9.21□□□□□ -0.93
CACNA1C-219ENST00000399649 C6orf99Q4VX62 202 aa9.21□□□□□ -0.93
CACNA1C-219ENST00000399649 DOCK7Q96N67 2140 aa9.21□□□□□ -0.94
CACNA1C-219ENST00000399649 SHISA2Q6UWI4 295 aa9.21□□□□□ -0.94
CACNA1C-219ENST00000399649 FAM19A3Q7Z5A8 133 aa9.21□□□□□ -0.94
CACNA1C-219ENST00000399649 LOC107984640A0A0U1RRK4 108 aa9.2□□□□□ -0.94
CACNA1C-219ENST00000399649 K7EQG2 157 aa9.2□□□□□ -0.94
CACNA1C-219ENST00000399649 TRBV6-4A0A1B0GX49 114 aa9.2□□□□□ -0.94
CACNA1C-219ENST00000399649 FAM30AQ9NZY2 134 aa9.2□□□□□ -0.94
CACNA1C-219ENST00000399649 DENND4AQ7Z401 1863 aa9.2□□□□□ -0.94
CACNA1C-219ENST00000399649 IGLV2-18A0A075B6J9 118 aa9.2□□□□□ -0.94
CACNA1C-219ENST00000399649 LINC01548A6NM66 108 aa9.2□□□□□ -0.94
CACNA1C-219ENST00000399649 M0R2N4 97 aa9.2□□□□□ -0.94
CACNA1C-219ENST00000399649 PLAC8L1A1L4L8 177 aa9.19□□□□□ -0.94
CACNA1C-219ENST00000399649 INAFM1C9JVW0 142 aa9.19□□□□□ -0.94
CACNA1C-219ENST00000399649 IGLV4-69A0A075B6H9 119 aa9.19□□□□□ -0.94
CACNA1C-219ENST00000399649 LINC00482Q8N8I6 264 aa9.19□□□□□ -0.94
CACNA1C-219ENST00000399649 Q6ZVQ6 151 aa9.19□□□□□ -0.94
CACNA1C-219ENST00000399649 TRBV27A0A0K0K1C4 114 aa9.18□□□□□ -0.94
CACNA1C-219ENST00000399649 ZFAND3Q9H8U3 227 aa9.18□□□□□ -0.94
CACNA1C-219ENST00000399649 IGF1P05019 195 aa9.18□□□□□ -0.94
CACNA1C-219ENST00000399649 FBXL19-AS1Q494R0 122 aa9.18□□□□□ -0.94
CACNA1C-219ENST00000399649 TRBV6-5A0A0K0K1A5 114 aa9.18□□□□□ -0.94
CACNA1C-219ENST00000399649 TMEM131Q92545 1883 aa9.17□□□□□ -0.94
CACNA1C-219ENST00000399649 SERP2Q8N6R1 65 aa9.17□□□□□ -0.94
CACNA1C-219ENST00000399649 LINC00474Q9P2X8 69 aa9.17□□□□□ -0.94
CACNA1C-219ENST00000399649 BBC3Q96PG8 261 aaPredicted RBP9.17□□□□□ -0.94
CACNA1C-219ENST00000399649 RPL37AP8A6NKH3 93 aa9.16□□□□□ -0.94
CACNA1C-219ENST00000399649 M0QY20 66 aa9.16□□□□□ -0.94
CACNA1C-219ENST00000399649 LY6G6CO95867 125 aa9.16□□□□□ -0.94
CACNA1C-219ENST00000399649 CEP250Q9BV73 2442 aa9.16□□□□□ -0.94
CACNA1C-219ENST00000399649 TIMM17BO60830 172 aa9.16□□□□□ -0.94
CACNA1C-219ENST00000399649 CD164L2Q6UWJ8 174 aa9.16□□□□□ -0.94
CACNA1C-219ENST00000399649 IGLV2-8P01709 118 aa9.16□□□□□ -0.94
CACNA1C-219ENST00000399649 TRIOBPQ9H2D6 2365 aa9.15□□□□□ -0.94
CACNA1C-219ENST00000399649 C10orf25Q5T742 122 aa9.15□□□□□ -0.94
CACNA1C-219ENST00000399649 GDF5OSQ5U4N7 250 aa9.15□□□□□ -0.94
CACNA1C-219ENST00000399649 ANAPC1Q9H1A4 1944 aa9.15□□□□□ -0.94
CACNA1C-219ENST00000399649 MRPS12O15235 138 aaKnown RBP9.15□□□□□ -0.94
CACNA1C-219ENST00000399649 PLA2G1BP04054 148 aaKnown RBP9.15□□□□□ -0.94
CACNA1C-219ENST00000399649 PROK1P58294 105 aa9.15□□□□□ -0.95
CACNA1C-219ENST00000399649 NDUFA7O95182 113 aa9.14□□□□□ -0.95
CACNA1C-219ENST00000399649 LMO4P61968 165 aa9.14□□□□□ -0.95
CACNA1C-219ENST00000399649 Q6ZQY7 126 aa9.14□□□□□ -0.95
CACNA1C-219ENST00000399649 COX17Q14061 63 aa9.14□□□□□ -0.95
CACNA1C-219ENST00000399649 RETNQ9HD89 108 aa9.14□□□□□ -0.95
CACNA1C-219ENST00000399649 LELP1Q5T871 98 aa9.14□□□□□ -0.95
CACNA1C-219ENST00000399649 KPRPQ5T749 579 aaPredicted RBP9.13□□□□□ -0.95
CACNA1C-219ENST00000399649 MAPKAPK5-AS1Q8N8E1 139 aa9.13□□□□□ -0.95
CACNA1C-219ENST00000399649 AKAP6Q13023 2319 aa9.13□□□□□ -0.95
CACNA1C-219ENST00000399649 C11orf1Q9H5F2 150 aa9.13□□□□□ -0.95
CACNA1C-219ENST00000399649 U3KQK5 164 aa9.13□□□□□ -0.95
CACNA1C-219ENST00000399649 Q8N976 141 aa9.12□□□□□ -0.95
CACNA1C-219ENST00000399649 IMUPQ9GZP8 106 aa9.12□□□□□ -0.95
CACNA1C-219ENST00000399649 PYGO1Q9Y3Y4 419 aa9.12□□□□□ -0.95
CACNA1C-219ENST00000399649 SMIM11BQ8TCY0 68 aa9.12□□□□□ -0.95
CACNA1C-219ENST00000399649 CLUHP3Q96NS8 147 aa9.12□□□□□ -0.95
CACNA1C-219ENST00000399649 DYSFO75923 2080 aa9.12□□□□□ -0.95
CACNA1C-219ENST00000399649 RBX1P62877 108 aa9.11□□□□□ -0.95
CACNA1C-219ENST00000399649 C1orf195Q5TG92 126 aa9.11□□□□□ -0.95
CACNA1C-219ENST00000399649 Q6ZSV7 163 aa9.11□□□□□ -0.95
CACNA1C-219ENST00000399649 RNF185Q96GF1 192 aa9.11□□□□□ -0.95
CACNA1C-219ENST00000399649 WFDC10AQ9H1F0 79 aa9.11□□□□□ -0.95
CACNA1C-219ENST00000399649 KIF26AQ9ULI4 1882 aaPredicted RBP9.11□□□□□ -0.95
CACNA1C-219ENST00000399649 LINC00959A0A1B0GUT2 108 aa9.11□□□□□ -0.95
CACNA1C-219ENST00000399649 C19orf84I3L1E1 186 aa9.11□□□□□ -0.95
CACNA1C-219ENST00000399649 DOCK10Q96BY6 2186 aa9.11□□□□□ -0.95
CACNA1C-219ENST00000399649 MSMPQ1L6U9 139 aa9.11□□□□□ -0.95
CACNA1C-219ENST00000399649 C22orf34Q6ZV56 151 aa9.11□□□□□ -0.95
CACNA1C-219ENST00000399649 LINC00526Q96FQ7 95 aa9.11□□□□□ -0.95
CACNA1C-219ENST00000399649 ESRGQ1W209 222 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms