RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 MRPS12O15235 138 aaKnown RBP9.54□□□□□ -0.88
CACNA1C-209ENST00000399603 UBE2D2P62837 147 aa9.54□□□□□ -0.88
CACNA1C-209ENST00000399603 REG3AQ06141 175 aa9.54□□□□□ -0.88
CACNA1C-209ENST00000399603 C14orf177Q52M58 125 aa9.54□□□□□ -0.88
CACNA1C-209ENST00000399603 CLUHP3Q96NS8 147 aa9.54□□□□□ -0.88
CACNA1C-209ENST00000399603 THADAQ6YHU6 1953 aa9.53□□□□□ -0.88
CACNA1C-209ENST00000399603 RSPO1Q2MKA7 263 aaPredicted RBP9.53□□□□□ -0.88
CACNA1C-209ENST00000399603 ARHGAP21Q5T5U3 1957 aa9.53□□□□□ -0.88
CACNA1C-209ENST00000399603 MGAMO43451 1857 aa9.53□□□□□ -0.88
CACNA1C-209ENST00000399603 PCNTO95613 3336 aa9.53□□□□□ -0.88
CACNA1C-209ENST00000399603 COX7CP15954 63 aa9.52□□□□□ -0.88
CACNA1C-209ENST00000399603 C6orf99Q4VX62 202 aa9.52□□□□□ -0.88
CACNA1C-209ENST00000399603 PIP4P1Q86T03 277 aa9.52□□□□□ -0.88
CACNA1C-209ENST00000399603 LINC00208Q96KT6 92 aa9.52□□□□□ -0.89
CACNA1C-209ENST00000399603 H3BUA1 57 aa9.52□□□□□ -0.89
CACNA1C-209ENST00000399603 ZFAND2AQ8N6M9 145 aa9.52□□□□□ -0.89
CACNA1C-209ENST00000399603 C15orf65H3BRN8 121 aa9.52□□□□□ -0.89
CACNA1C-209ENST00000399603 PCOTHQ58A44 107 aa9.52□□□□□ -0.89
CACNA1C-209ENST00000399603 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.52□□□□□ -0.89
CACNA1C-209ENST00000399603 SMIM9A6NGZ8 99 aa9.51□□□□□ -0.89
CACNA1C-209ENST00000399603 TRIAP1O43715 76 aa9.51□□□□□ -0.89
CACNA1C-209ENST00000399603 GRNP28799 593 aaKnown RBP9.51□□□□□ -0.89
CACNA1C-209ENST00000399603 LRRC75A-AS1Q8N1F1 130 aa9.51□□□□□ -0.89
CACNA1C-209ENST00000399603 CHCHD10Q8WYQ3 142 aaPredicted RBP9.51□□□□□ -0.89
CACNA1C-209ENST00000399603 TRBV6-1A0A0K0K1D8 114 aa9.51□□□□□ -0.89
CACNA1C-209ENST00000399603 LINC00311Q8N616 119 aa9.51□□□□□ -0.89
CACNA1C-209ENST00000399603 C7orf33Q8WU49 177 aa9.51□□□□□ -0.89
CACNA1C-209ENST00000399603 ESRGQ1W209 222 aa9.51□□□□□ -0.89
CACNA1C-209ENST00000399603 Q8TCH9 128 aa9.51□□□□□ -0.89
CACNA1C-209ENST00000399603 TMEM89A2RUT3 159 aa9.5□□□□□ -0.89
CACNA1C-209ENST00000399603 LY6LH3BQJ8 138 aa9.5□□□□□ -0.89
CACNA1C-209ENST00000399603 SORL1Q92673 2214 aa9.5□□□□□ -0.89
CACNA1C-209ENST00000399603 PRO0255Q9UI72 69 aa9.5□□□□□ -0.89
CACNA1C-209ENST00000399603 C20orf203Q8NBC4 194 aa9.49□□□□□ -0.89
CACNA1C-209ENST00000399603 C11orf45Q8TAV5 145 aa9.49□□□□□ -0.89
CACNA1C-209ENST00000399603 SMAD5-AS1Q9Y6J3 95 aa9.49□□□□□ -0.89
CACNA1C-209ENST00000399603 TP73-AS1Q9UF72 201 aa9.49□□□□□ -0.89
CACNA1C-209ENST00000399603 TRBV10-1A0A0K0K1A3 114 aa9.49□□□□□ -0.89
CACNA1C-209ENST00000399603 FRMD6-AS1P0C7T7 363 aa9.49□□□□□ -0.89
CACNA1C-209ENST00000399603 PRRC2AP48634 2157 aaKnown RBP9.49□□□□□ -0.89
CACNA1C-209ENST00000399603 RPL37AP8A6NKH3 93 aa9.49□□□□□ -0.89
CACNA1C-209ENST00000399603 RITA1Q96K30 269 aa9.49□□□□□ -0.89
CACNA1C-209ENST00000399603 CACNA1HO95180 2353 aa9.49□□□□□ -0.89
CACNA1C-209ENST00000399603 Q6ZQY7 126 aa9.48□□□□□ -0.89
CACNA1C-209ENST00000399603 NYNRINQ9P2P1 1898 aaKnown RBP9.48□□□□□ -0.89
CACNA1C-209ENST00000399603 TCF20Q9UGU0 1960 aaKnown RBP9.48□□□□□ -0.89
CACNA1C-209ENST00000399603 IGF1P05019 195 aa9.48□□□□□ -0.89
CACNA1C-209ENST00000399603 CRYGAP11844 174 aa9.48□□□□□ -0.89
CACNA1C-209ENST00000399603 MED12LQ86YW9 2145 aa9.48□□□□□ -0.89
CACNA1C-209ENST00000399603 SPINT4Q6UDR6 99 aa9.48□□□□□ -0.89
CACNA1C-209ENST00000399603 A6NDX4 124 aa9.48□□□□□ -0.89
CACNA1C-209ENST00000399603 Q8N976 141 aa9.48□□□□□ -0.89
CACNA1C-209ENST00000399603 LINC00526Q96FQ7 95 aa9.47□□□□□ -0.89
CACNA1C-209ENST00000399603 LCTP09848 1927 aa9.47□□□□□ -0.89
CACNA1C-209ENST00000399603 ZNF73O43830 326 aaPredicted RBP9.47□□□□□ -0.89
CACNA1C-209ENST00000399603 TRBV6-5A0A0K0K1A5 114 aa9.47□□□□□ -0.89
CACNA1C-209ENST00000399603 ZSWIM8A7E2V4 1837 aa9.46□□□□□ -0.89
CACNA1C-209ENST00000399603 CDKN2A-AS1Q9UH64 79 aa9.46□□□□□ -0.89
CACNA1C-209ENST00000399603 CFAP126Q5VTH2 177 aa9.46□□□□□ -0.89
CACNA1C-209ENST00000399603 M0R2N4 97 aa9.46□□□□□ -0.9
CACNA1C-209ENST00000399603 IGLV1-44P01699 117 aa9.46□□□□□ -0.9
CACNA1C-209ENST00000399603 TANC2Q9HCD6 1990 aa9.46□□□□□ -0.9
CACNA1C-209ENST00000399603 LINC00467Q9BRT7 94 aa9.46□□□□□ -0.9
CACNA1C-209ENST00000399603 NBASA2RRP1 2371 aa9.46□□□□□ -0.9
CACNA1C-209ENST00000399603 LINC00308Q8TCZ7 52 aa9.45□□□□□ -0.9
CACNA1C-209ENST00000399603 IGLV2-18A0A075B6J9 118 aa9.45□□□□□ -0.9
CACNA1C-209ENST00000399603 TP53TG3Q9ULZ0 132 aa9.45□□□□□ -0.9
CACNA1C-209ENST00000399603 IGHV7-81A0A0B4J1V7 117 aa9.45□□□□□ -0.9
CACNA1C-209ENST00000399603 A0A1W2PNU3 283 aaPredicted RBP9.45□□□□□ -0.9
CACNA1C-209ENST00000399603 ZFP36P26651 326 aaKnown RBP9.45□□□□□ -0.9
CACNA1C-209ENST00000399603 SPRNQ5BIV9 151 aa9.45□□□□□ -0.9
CACNA1C-209ENST00000399603 NCKAP5O14513 1909 aa9.45□□□□□ -0.9
CACNA1C-209ENST00000399603 I3L2K1 104 aa9.44□□□□□ -0.9
CACNA1C-209ENST00000399603 DENND4AQ7Z401 1863 aa9.44□□□□□ -0.9
CACNA1C-209ENST00000399603 K7EIM0 57 aa9.44□□□□□ -0.9
CACNA1C-209ENST00000399603 RNASE3P12724 160 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-209ENST00000399603 PCNX1Q96RV3 2341 aa9.44□□□□□ -0.9
CACNA1C-209ENST00000399603 PATE2Q6UY27 113 aa9.44□□□□□ -0.9
CACNA1C-209ENST00000399603 A8MZ25 164 aa9.43□□□□□ -0.9
CACNA1C-209ENST00000399603 Q6ZTI0 123 aa9.43□□□□□ -0.9
CACNA1C-209ENST00000399603 SPRY4Q9C004 299 aa9.43□□□□□ -0.9
CACNA1C-209ENST00000399603 WISP2O76076 250 aa9.43□□□□□ -0.9
CACNA1C-209ENST00000399603 CRIP2P52943 208 aaPredicted RBP9.43□□□□□ -0.9
CACNA1C-209ENST00000399603 PLXND1Q9Y4D7 1925 aa9.42□□□□□ -0.9
CACNA1C-209ENST00000399603 CTSZQ9UBR2 303 aa9.42□□□□□ -0.9
CACNA1C-209ENST00000399603 IGHV6-1A0A0B4J1U7 121 aa9.42□□□□□ -0.9
CACNA1C-209ENST00000399603 TSC2P49815 1807 aa9.42□□□□□ -0.9
CACNA1C-209ENST00000399603 PLXNB1O43157 2135 aa9.42□□□□□ -0.9
CACNA1C-209ENST00000399603 CIRBP-AS1Q8TBR5 109 aa9.42□□□□□ -0.9
CACNA1C-209ENST00000399603 PRLHP81277 87 aa9.41□□□□□ -0.9
CACNA1C-209ENST00000399603 LOC100131303A0A0U1RQF7 123 aa9.41□□□□□ -0.9
CACNA1C-209ENST00000399603 CTRLP40313 264 aa9.41□□□□□ -0.9
CACNA1C-209ENST00000399603 RLFQ13129 1914 aa9.41□□□□□ -0.9
CACNA1C-209ENST00000399603 SPAG11AQ6PDA7 123 aa9.41□□□□□ -0.9
CACNA1C-209ENST00000399603 IGLV11-55A0A075B6I3 123 aa9.4□□□□□ -0.9
CACNA1C-209ENST00000399603 ZNF706Q9Y5V0 76 aaPredicted RBP9.4□□□□□ -0.9
CACNA1C-209ENST00000399603 DEFB131BA0A096LNP1 70 aa9.4□□□□□ -0.9
CACNA1C-209ENST00000399603 TRBV7-7A0A0K0K1E9 115 aa9.4□□□□□ -0.91
CACNA1C-209ENST00000399603 LINC01547P58512 204 aaPredicted RBP9.4□□□□□ -0.91
CACNA1C-209ENST00000399603 SYCNQ0VAF6 134 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms