RNA–Protein interactions for RNA: ENST00000398795.6

TNFSF11-203, Transcript of TNF superfamily member 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF11, Length 2,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-203ENST00000398795 IGHV3-53P01767 116 aa14.29□□□□□ -0.12
TNFSF11-203ENST00000398795 SPINK8P0C7L1 97 aa14.29□□□□□ -0.12
TNFSF11-203ENST00000398795 Q1RN00 199 aa14.29□□□□□ -0.12
TNFSF11-203ENST00000398795 Q6ZSN1 163 aa14.29□□□□□ -0.12
TNFSF11-203ENST00000398795 TMEM61Q8N0U2 210 aa14.29□□□□□ -0.12
TNFSF11-203ENST00000398795 DEFB136Q30KP8 78 aa14.29□□□□□ -0.12
TNFSF11-203ENST00000398795 BEAN1Q3B7T3 259 aa14.29□□□□□ -0.12
TNFSF11-203ENST00000398795 C11orf72Q8NBR9 251 aa14.29□□□□□ -0.12
TNFSF11-203ENST00000398795 RNF183Q96D59 192 aa14.29□□□□□ -0.12
TNFSF11-203ENST00000398795 BEX4Q9NWD9 120 aaPredicted RBP14.29□□□□□ -0.12
TNFSF11-203ENST00000398795 CELSR1Q9NYQ6 3014 aa14.28□□□□□ -0.12
TNFSF11-203ENST00000398795 ITPR1Q14643 2758 aa14.28□□□□□ -0.12
TNFSF11-203ENST00000398795 H7C2G1 150 aa14.28□□□□□ -0.12
TNFSF11-203ENST00000398795 C18orf65Q6ZTR6 163 aa14.28□□□□□ -0.12
TNFSF11-203ENST00000398795 MAPK1IP1LQ8NDC0 245 aa14.28□□□□□ -0.12
TNFSF11-203ENST00000398795 CHD8Q9HCK8 2581 aa14.27□□□□□ -0.12
TNFSF11-203ENST00000398795 ADARB2-AS1A8MUL3 147 aa14.27□□□□□ -0.12
TNFSF11-203ENST00000398795 XGP55808 180 aa14.27□□□□□ -0.12
TNFSF11-203ENST00000398795 MIAQ16674 131 aa14.27□□□□□ -0.12
TNFSF11-203ENST00000398795 MAP6D1Q9H9H5 199 aa14.27□□□□□ -0.12
TNFSF11-203ENST00000398795 MT-ATP8P03928 68 aa14.27□□□□□ -0.13
TNFSF11-203ENST00000398795 IGHV4-31P0DP07 118 aa14.27□□□□□ -0.13
TNFSF11-203ENST00000398795 C4orf3Q8WVX3 66 aa14.27□□□□□ -0.13
TNFSF11-203ENST00000398795 LINC01620Q4KN68 170 aa14.26□□□□□ -0.13
TNFSF11-203ENST00000398795 RNASE13Q5GAN3 156 aaKnown RBP14.26□□□□□ -0.13
TNFSF11-203ENST00000398795 ZFAND6Q6FIF0 208 aa14.26□□□□□ -0.13
TNFSF11-203ENST00000398795 Q9UF83 564 aa14.26□□□□□ -0.13
TNFSF11-203ENST00000398795 TIMM17BO60830 172 aa14.26□□□□□ -0.13
TNFSF11-203ENST00000398795 PRM2P04554 102 aa14.26□□□□□ -0.13
TNFSF11-203ENST00000398795 CKS1BP61024 79 aa14.26□□□□□ -0.13
TNFSF11-203ENST00000398795 LINC01587Q99440 93 aa14.26□□□□□ -0.13
TNFSF11-203ENST00000398795 SPTBN4Q9H254 2564 aa14.25□□□□□ -0.13
TNFSF11-203ENST00000398795 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.25□□□□□ -0.13
TNFSF11-203ENST00000398795 IGKV2-29A2NJV5 120 aaPredicted RBP14.25□□□□□ -0.13
TNFSF11-203ENST00000398795 RS1O15537 224 aa14.25□□□□□ -0.13
TNFSF11-203ENST00000398795 INSP01308 110 aa14.25□□□□□ -0.13
TNFSF11-203ENST00000398795 ADAMTSL4-AS1Q5T5F5 129 aa14.25□□□□□ -0.13
TNFSF11-203ENST00000398795 DOPEY2Q9Y3R5 2298 aa14.25□□□□□ -0.13
TNFSF11-203ENST00000398795 TRIAP1O43715 76 aa14.24□□□□□ -0.13
TNFSF11-203ENST00000398795 PRSS2P07478 247 aa14.24□□□□□ -0.13
TNFSF11-203ENST00000398795 YAE1D1Q9NRH1 226 aa14.24□□□□□ -0.13
TNFSF11-203ENST00000398795 DOPEY1Q5JWR5 2465 aa14.24□□□□□ -0.13
TNFSF11-203ENST00000398795 IGLV5-45A0A087WSX0 123 aa14.24□□□□□ -0.13
TNFSF11-203ENST00000398795 TIRAPP58753 221 aa14.24□□□□□ -0.13
TNFSF11-203ENST00000398795 CLUHP3Q96NS8 147 aa14.24□□□□□ -0.13
TNFSF11-203ENST00000398795 GEMIN7Q9H840 131 aaKnown RBP14.24□□□□□ -0.13
TNFSF11-203ENST00000398795 DYNLRB2Q8TF09 96 aa14.23□□□□□ -0.13
TNFSF11-203ENST00000398795 TRBV10-2A0A0K0K1G8 114 aa14.23□□□□□ -0.13
TNFSF11-203ENST00000398795 IFITM1P13164 125 aa14.22□□□□□ -0.13
TNFSF11-203ENST00000398795 DEFB114Q30KQ6 69 aa14.22□□□□□ -0.13
TNFSF11-203ENST00000398795 ICOSQ9Y6W8 199 aa14.22□□□□□ -0.13
TNFSF11-203ENST00000398795 RPL13AP40429 203 aaKnown RBP14.21□□□□□ -0.13
TNFSF11-203ENST00000398795 CSPG4Q6UVK1 2322 aa14.21□□□□□ -0.13
TNFSF11-203ENST00000398795 SPG11Q96JI7 2443 aa14.2□□□□□ -0.14
TNFSF11-203ENST00000398795 COX6CP09669 75 aa14.2□□□□□ -0.14
TNFSF11-203ENST00000398795 IGHV3-38A0A0C4DH36 116 aa14.19□□□□□ -0.14
TNFSF11-203ENST00000398795 NDUFA1O15239 70 aa14.19□□□□□ -0.14
TNFSF11-203ENST00000398795 A8MZ25 164 aa14.19□□□□□ -0.14
TNFSF11-203ENST00000398795 NTN5Q8WTR8 489 aaPredicted RBP14.19□□□□□ -0.14
TNFSF11-203ENST00000398795 CDKN2A-AS1Q9UH64 79 aa14.19□□□□□ -0.14
TNFSF11-203ENST00000398795 PKD1L2Q7Z442 2459 aa14.17□□□□□ -0.14
TNFSF11-203ENST00000398795 COL12A1Q99715 3063 aa14.16□□□□□ -0.14
TNFSF11-203ENST00000398795 DGAT2L7PQ6IED9 249 aa14.16□□□□□ -0.14
TNFSF11-203ENST00000398795 IL17DQ8TAD2 202 aa14.16□□□□□ -0.14
TNFSF11-203ENST00000398795 H3BT86 120 aa14.16□□□□□ -0.14
TNFSF11-203ENST00000398795 HERVK_113P63121 156 aa14.16□□□□□ -0.14
TNFSF11-203ENST00000398795 KHDC1LQ5JSQ8 128 aa14.16□□□□□ -0.14
TNFSF11-203ENST00000398795 FAM19A3Q7Z5A8 133 aa14.16□□□□□ -0.14
TNFSF11-203ENST00000398795 TMEM101Q96IK0 257 aa14.16□□□□□ -0.14
TNFSF11-203ENST00000398795 TRAV25A0A0B4J276 109 aa14.15□□□□□ -0.14
TNFSF11-203ENST00000398795 IGLV5-39A0A0G2JS06 123 aa14.15□□□□□ -0.15
TNFSF11-203ENST00000398795 CIRBPQ14011 172 aaKnown RBP14.15□□□□□ -0.15
TNFSF11-203ENST00000398795 IGHV3OR16-12A0A075B7B8 117 aa14.14□□□□□ -0.15
TNFSF11-203ENST00000398795 CSDC2Q9Y534 153 aaKnown RBP14.14□□□□□ -0.15
TNFSF11-203ENST00000398795 ODF3L2Q3SX64 289 aa14.13□□□□□ -0.15
TNFSF11-203ENST00000398795 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.13□□□□□ -0.15
TNFSF11-203ENST00000398795 UBE2WQ96B02 151 aa14.13□□□□□ -0.15
TNFSF11-203ENST00000398795 CITED1Q99966 193 aa14.13□□□□□ -0.15
TNFSF11-203ENST00000398795 TRBV10-1A0A0K0K1A3 114 aa14.13□□□□□ -0.15
TNFSF11-203ENST00000398795 LST1O00453 97 aa14.13□□□□□ -0.15
TNFSF11-203ENST00000398795 C2orf82Q6UX34 121 aa14.13□□□□□ -0.15
TNFSF11-203ENST00000398795 NACAE9PAV3 2078 aa14.12□□□□□ -0.15
TNFSF11-203ENST00000398795 H7C423 109 aa14.12□□□□□ -0.15
TNFSF11-203ENST00000398795 NPC2P61916 151 aa14.12□□□□□ -0.15
TNFSF11-203ENST00000398795 LINC00242Q5T6M2 205 aa14.12□□□□□ -0.15
TNFSF11-203ENST00000398795 LRRC75A-AS1Q8N1F1 130 aa14.12□□□□□ -0.15
TNFSF11-203ENST00000398795 XCL2Q9UBD3 114 aa14.12□□□□□ -0.15
TNFSF11-203ENST00000398795 TEX49A0A1B0GTD5 131 aa14.12□□□□□ -0.15
TNFSF11-203ENST00000398795 C1orf158Q8N1D5 194 aa14.12□□□□□ -0.15
TNFSF11-203ENST00000398795 TMEM86BQ8N661 226 aa14.12□□□□□ -0.15
TNFSF11-203ENST00000398795 COX6A2Q02221 97 aa14.11□□□□□ -0.15
TNFSF11-203ENST00000398795 DEFB113Q30KQ7 82 aa14.11□□□□□ -0.15
TNFSF11-203ENST00000398795 STHQ8IWL8 128 aa14.11□□□□□ -0.15
TNFSF11-203ENST00000398795 SORL1Q92673 2214 aa14.1□□□□□ -0.15
TNFSF11-203ENST00000398795 RPL36AP83881 106 aaKnown RBP14.1□□□□□ -0.15
TNFSF11-203ENST00000398795 DAZ2Q13117 558 aaKnown RBP14.1□□□□□ -0.15
TNFSF11-203ENST00000398795 Q6ZSV7 163 aa14.1□□□□□ -0.15
TNFSF11-203ENST00000398795 DAZ4Q86SG3 579 aaKnown RBP14.1□□□□□ -0.15
TNFSF11-203ENST00000398795 TEX29Q8N6K0 151 aa14.1□□□□□ -0.15
TNFSF11-203ENST00000398795 COPS9Q8WXC6 57 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms