RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 MED14OSP0DP75 135 aa10.72□□□□□ -0.69
PCDHA11-201ENST00000398640 REG3AQ06141 175 aa10.72□□□□□ -0.69
PCDHA11-201ENST00000398640 DEFB114Q30KQ6 69 aa10.72□□□□□ -0.69
PCDHA11-201ENST00000398640 NFE4Q86UQ8 179 aa10.72□□□□□ -0.69
PCDHA11-201ENST00000398640 A0A0B4J2C4 111 aa10.72□□□□□ -0.69
PCDHA11-201ENST00000398640 LINC00574Q9H8X3 128 aa10.72□□□□□ -0.69
PCDHA11-201ENST00000398640 PSMG3-AS1Q96PY0 264 aa10.71□□□□□ -0.69
PCDHA11-201ENST00000398640 CITED1Q99966 193 aa10.71□□□□□ -0.69
PCDHA11-201ENST00000398640 KIR2DL5BA0A0G2JN68 375 aa10.71□□□□□ -0.69
PCDHA11-201ENST00000398640 KIR2DL5BA0A0G2JPC4 375 aa10.71□□□□□ -0.69
PCDHA11-201ENST00000398640 KIR2DL5AQ8N109 375 aa10.71□□□□□ -0.69
PCDHA11-201ENST00000398640 CTRLP40313 264 aa10.71□□□□□ -0.69
PCDHA11-201ENST00000398640 IGKV2D-26A0A0A0MRZ7 120 aa10.71□□□□□ -0.7
PCDHA11-201ENST00000398640 NDUFA7O95182 113 aa10.71□□□□□ -0.7
PCDHA11-201ENST00000398640 ACYP1P07311 99 aa10.71□□□□□ -0.7
PCDHA11-201ENST00000398640 LINC01620Q4KN68 170 aa10.7□□□□□ -0.7
PCDHA11-201ENST00000398640 FAM19A1Q7Z5A9 133 aa10.7□□□□□ -0.7
PCDHA11-201ENST00000398640 IGHV1-58A0A0C4DH39 117 aa10.7□□□□□ -0.7
PCDHA11-201ENST00000398640 COX7BP24311 80 aa10.7□□□□□ -0.7
PCDHA11-201ENST00000398640 ZNF80P51504 273 aaPredicted RBP10.7□□□□□ -0.7
PCDHA11-201ENST00000398640 FAM19A5Q7Z5A7 132 aaPredicted RBP10.7□□□□□ -0.7
PCDHA11-201ENST00000398640 ACACBO00763 2458 aa10.69□□□□□ -0.7
PCDHA11-201ENST00000398640 LYRM9A8MSI8 78 aa10.69□□□□□ -0.7
PCDHA11-201ENST00000398640 E9PLD3 99 aa10.69□□□□□ -0.7
PCDHA11-201ENST00000398640 C1orf229Q6ZS94 237 aaPredicted RBP10.69□□□□□ -0.7
PCDHA11-201ENST00000398640 SS18L2Q9UHA2 77 aa10.69□□□□□ -0.7
PCDHA11-201ENST00000398640 MED12LQ86YW9 2145 aa10.69□□□□□ -0.7
PCDHA11-201ENST00000398640 UBE2D1P51668 147 aa10.69□□□□□ -0.7
PCDHA11-201ENST00000398640 C20orf203Q8NBC4 194 aa10.69□□□□□ -0.7
PCDHA11-201ENST00000398640 ZFAND2AQ8N6M9 145 aa10.68□□□□□ -0.7
PCDHA11-201ENST00000398640 C7orf33Q8WU49 177 aa10.68□□□□□ -0.7
PCDHA11-201ENST00000398640 B5MCH6 92 aa10.68□□□□□ -0.7
PCDHA11-201ENST00000398640 C18orf65Q6ZTR6 163 aa10.68□□□□□ -0.7
PCDHA11-201ENST00000398640 IGKV4-1P06312 121 aa10.67□□□□□ -0.7
PCDHA11-201ENST00000398640 IGKV1D-37A0A075B6S9 117 aa10.67□□□□□ -0.7
PCDHA11-201ENST00000398640 TRAV10A0A0B4J240 114 aa10.67□□□□□ -0.7
PCDHA11-201ENST00000398640 ARHGAP21Q5T5U3 1957 aa10.67□□□□□ -0.7
PCDHA11-201ENST00000398640 COL4A2P08572 1712 aa10.67□□□□□ -0.7
PCDHA11-201ENST00000398640 C20orf173Q96LM9 149 aa10.67□□□□□ -0.7
PCDHA11-201ENST00000398640 LY6LH3BQJ8 138 aa10.67□□□□□ -0.7
PCDHA11-201ENST00000398640 OXLD1Q5BKU9 147 aa10.67□□□□□ -0.7
PCDHA11-201ENST00000398640 CHCHD10Q8WYQ3 142 aaPredicted RBP10.67□□□□□ -0.7
PCDHA11-201ENST00000398640 WFDC10AQ9H1F0 79 aa10.66□□□□□ -0.7
PCDHA11-201ENST00000398640 FAM236AA0A1B0GUQ0 79 aa10.66□□□□□ -0.7
PCDHA11-201ENST00000398640 FAM236BA0A1B0GV22 79 aa10.66□□□□□ -0.7
PCDHA11-201ENST00000398640 EBI3Q14213 229 aa10.66□□□□□ -0.7
PCDHA11-201ENST00000398640 WFDC2Q14508 124 aa10.66□□□□□ -0.7
PCDHA11-201ENST00000398640 H3BQ85 93 aa10.66□□□□□ -0.7
PCDHA11-201ENST00000398640 SMIM9A6NGZ8 99 aa10.65□□□□□ -0.7
PCDHA11-201ENST00000398640 ODF1Q14990 250 aa10.65□□□□□ -0.7
PCDHA11-201ENST00000398640 TRBV10-1A0A0K0K1A3 114 aa10.65□□□□□ -0.7
PCDHA11-201ENST00000398640 LINC00467Q9BRT7 94 aa10.65□□□□□ -0.7
PCDHA11-201ENST00000398640 TNCP24821 2201 aa10.65□□□□□ -0.7
PCDHA11-201ENST00000398640 JMJD7-PLA2G4BH0Y9G9 81 aa10.65□□□□□ -0.7
PCDHA11-201ENST00000398640 TMEM256-PLSCR3K7ERE1 68 aa10.65□□□□□ -0.7
PCDHA11-201ENST00000398640 MIFP14174 115 aa10.64□□□□□ -0.71
PCDHA11-201ENST00000398640 LINC00322Q6ZN03 302 aaPredicted RBP10.64□□□□□ -0.71
PCDHA11-201ENST00000398640 HIGD1BQ9P298 99 aa10.63□□□□□ -0.71
PCDHA11-201ENST00000398640 FREM1Q5H8C1 2179 aa10.62□□□□□ -0.71
PCDHA11-201ENST00000398640 C19orf71A6NCJ1 209 aa10.62□□□□□ -0.71
PCDHA11-201ENST00000398640 AVPP01185 164 aa10.62□□□□□ -0.71
PCDHA11-201ENST00000398640 UFSP1Q6NVU6 142 aa10.62□□□□□ -0.71
PCDHA11-201ENST00000398640 SEC61GP60059 68 aa10.62□□□□□ -0.71
PCDHA11-201ENST00000398640 NANOS2P60321 138 aaKnown RBP10.62□□□□□ -0.71
PCDHA11-201ENST00000398640 TRBV10-2A0A0K0K1G8 114 aa10.62□□□□□ -0.71
PCDHA11-201ENST00000398640 GDF5OSQ5U4N7 250 aa10.62□□□□□ -0.71
PCDHA11-201ENST00000398640 C11orf1Q9H5F2 150 aa10.62□□□□□ -0.71
PCDHA11-201ENST00000398640 A0A0J9YWU9 116 aa10.61□□□□□ -0.71
PCDHA11-201ENST00000398640 EML5Q05BV3 1969 aa10.61□□□□□ -0.71
PCDHA11-201ENST00000398640 A0A1W2PPR1 153 aa10.61□□□□□ -0.71
PCDHA11-201ENST00000398640 K7EQG2 157 aa10.61□□□□□ -0.71
PCDHA11-201ENST00000398640 PROK1P58294 105 aa10.61□□□□□ -0.71
PCDHA11-201ENST00000398640 IGF2RP11717 2491 aa10.61□□□□□ -0.71
PCDHA11-201ENST00000398640 NOTCH2Q04721 2471 aa10.61□□□□□ -0.71
PCDHA11-201ENST00000398640 Q6ZPA2 131 aa10.61□□□□□ -0.71
PCDHA11-201ENST00000398640 TEN1Q86WV5 123 aa10.61□□□□□ -0.71
PCDHA11-201ENST00000398640 SPANXCQ9NY87 97 aa10.61□□□□□ -0.71
PCDHA11-201ENST00000398640 UBE2D4Q9Y2X8 147 aa10.61□□□□□ -0.71
PCDHA11-201ENST00000398640 HRCT1Q6UXD1 115 aa10.61□□□□□ -0.71
PCDHA11-201ENST00000398640 CRYGBP07316 175 aa10.6□□□□□ -0.71
PCDHA11-201ENST00000398640 P0C879 139 aa10.6□□□□□ -0.71
PCDHA11-201ENST00000398640 PTPN13Q12923 2485 aa10.6□□□□□ -0.71
PCDHA11-201ENST00000398640 FOXI1Q12951 378 aa10.6□□□□□ -0.71
PCDHA11-201ENST00000398640 MIAQ16674 131 aa10.6□□□□□ -0.71
PCDHA11-201ENST00000398640 XAGE1AQ9HD64 81 aa10.6□□□□□ -0.71
PCDHA11-201ENST00000398640 ANKHD1Q8IWZ3 2542 aaKnown RBP10.6□□□□□ -0.71
PCDHA11-201ENST00000398640 C9orf85Q96MD7 179 aa10.6□□□□□ -0.71
PCDHA11-201ENST00000398640 PTH2Q96A98 100 aa10.6□□□□□ -0.71
PCDHA11-201ENST00000398640 ATOX1O00244 68 aa10.6□□□□□ -0.71
PCDHA11-201ENST00000398640 NEXN-AS1Q8NBZ9 246 aa10.6□□□□□ -0.71
PCDHA11-201ENST00000398640 DCANP1Q8TF63 244 aa10.6□□□□□ -0.71
PCDHA11-201ENST00000398640 SLPIP03973 132 aa10.59□□□□□ -0.71
PCDHA11-201ENST00000398640 A0A0J9YXY3 114 aa10.59□□□□□ -0.71
PCDHA11-201ENST00000398640 BRWD1-AS2P59051 145 aa10.59□□□□□ -0.71
PCDHA11-201ENST00000398640 SCXQ7RTU7 201 aa10.58□□□□□ -0.72
PCDHA11-201ENST00000398640 TP73-AS1Q9UF72 201 aa10.58□□□□□ -0.72
PCDHA11-201ENST00000398640 ADAMTS20P59510 1910 aa10.58□□□□□ -0.72
PCDHA11-201ENST00000398640 KIR2DL5BQ8NHK3 375 aa10.58□□□□□ -0.72
PCDHA11-201ENST00000398640 KPRPQ5T749 579 aaPredicted RBP10.58□□□□□ -0.72
PCDHA11-201ENST00000398640 CASC2Q6XLA1 102 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms