RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 ZNF256Q9Y2P7 627 aaPredicted RBP3.78□□□□□ -1.8
SSR1-202ENST00000397511 DOPEY1Q5JWR5 2465 aa3.78□□□□□ -1.8
SSR1-202ENST00000397511 NAV2Q8IVL1 2488 aa3.78□□□□□ -1.8
SSR1-202ENST00000397511 C2CD3Q4AC94 2353 aa3.78□□□□□ -1.8
SSR1-202ENST00000397511 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.78□□□□□ -1.81
SSR1-202ENST00000397511 ACYP1P07311 99 aa3.78□□□□□ -1.81
SSR1-202ENST00000397511 POM121L12Q8N7R1 296 aa3.78□□□□□ -1.81
SSR1-202ENST00000397511 TMEM263Q8WUH6 116 aaKnown RBP3.78□□□□□ -1.81
SSR1-202ENST00000397511 IGHV7-4-1A0A0J9YVY3 117 aa3.77□□□□□ -1.81
SSR1-202ENST00000397511 KHDC1LQ5JSQ8 128 aa3.77□□□□□ -1.81
SSR1-202ENST00000397511 MRAPQ8TCY5 172 aa3.77□□□□□ -1.81
SSR1-202ENST00000397511 ITLN2Q8WWU7 325 aaPredicted RBP3.77□□□□□ -1.81
SSR1-202ENST00000397511 JPT2Q9H910 190 aa3.77□□□□□ -1.81
SSR1-202ENST00000397511 KLK5Q9Y337 293 aaPredicted RBP3.77□□□□□ -1.81
SSR1-202ENST00000397511 COX7CP15954 63 aa3.77□□□□□ -1.81
SSR1-202ENST00000397511 LGALS3P17931 250 aaKnown RBP3.77□□□□□ -1.81
SSR1-202ENST00000397511 FAM74A4Q5TZK3 123 aa3.77□□□□□ -1.81
SSR1-202ENST00000397511 ZNRF2Q8NHG8 242 aa3.77□□□□□ -1.81
SSR1-202ENST00000397511 DUX3Q96PT4 197 aa3.77□□□□□ -1.81
SSR1-202ENST00000397511 PHLDA3Q9Y5J5 127 aa3.77□□□□□ -1.81
SSR1-202ENST00000397511 JMJD1CQ15652 2540 aa3.77□□□□□ -1.81
SSR1-202ENST00000397511 TRAV12-2A0A075B6T6 113 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 IGHV4-30-2A0A087WSY4 118 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 A0A087WWL8 130 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 TRBV30A0A0K0K1B3 111 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 AVPP01185 164 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 DEFB121Q5J5C9 76 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 C2orf66Q6UXQ4 117 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 CCL19Q99731 98 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 SLC50A1Q9BRV3 221 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 MUC4Q99102 2169 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 TRBV7-1A0A0A6YYK4 115 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 C11orf86A6NJI1 115 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 TRACP01848 142 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 COX6CP09669 75 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 CRYGAP11844 174 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 CEMP1Q6PRD7 247 aaPredicted RBP3.76□□□□□ -1.81
SSR1-202ENST00000397511 GPHB5Q86YW7 130 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 MOB4Q9Y3A3 225 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 TRAV12-3A0A0B4J271 114 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 IGHV1-69DA0A0B4J2H0 117 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 F5H697 171 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 H7C423 109 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 IGHV1-69P01742 117 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 ELANEP08246 267 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 LINC00477Q96M19 166 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 RHPN1-AS1Q9BWJ2 59 aa3.76□□□□□ -1.81
SSR1-202ENST00000397511 TRIAP1O43715 76 aa3.75□□□□□ -1.81
SSR1-202ENST00000397511 SUMO2P61956 95 aaKnown RBP3.75□□□□□ -1.81
SSR1-202ENST00000397511 LINC00643Q86TS7 51 aa3.75□□□□□ -1.81
SSR1-202ENST00000397511 MTORP42345 2549 aa3.75□□□□□ -1.81
SSR1-202ENST00000397511 A0A0U1RRA0 63 aa3.75□□□□□ -1.81
SSR1-202ENST00000397511 J3QQQ9 107 aa3.75□□□□□ -1.81
SSR1-202ENST00000397511 RS1O15537 224 aa3.75□□□□□ -1.81
SSR1-202ENST00000397511 PRM2P04554 102 aa3.75□□□□□ -1.81
SSR1-202ENST00000397511 ZNF22P17026 224 aaPredicted RBP3.75□□□□□ -1.81
SSR1-202ENST00000397511 TMEM258P61165 79 aa3.75□□□□□ -1.81
SSR1-202ENST00000397511 KIR2DL5BQ8NHK3 375 aa3.75□□□□□ -1.81
SSR1-202ENST00000397511 ACANP16112 2415 aa3.75□□□□□ -1.81
SSR1-202ENST00000397511 PRRC2AP48634 2157 aaKnown RBP3.75□□□□□ -1.81
SSR1-202ENST00000397511 OVOL1O14753 267 aa3.74□□□□□ -1.81
SSR1-202ENST00000397511 PRB1P04280 392 aa3.74□□□□□ -1.81
SSR1-202ENST00000397511 CXCL5P42830 114 aa3.74□□□□□ -1.81
SSR1-202ENST00000397511 TSPEAR-AS2P59090 65 aa3.74□□□□□ -1.81
SSR1-202ENST00000397511 MUSTN1Q8IVN3 82 aa3.74□□□□□ -1.81
SSR1-202ENST00000397511 IGLV4-69A0A075B6H9 119 aa3.74□□□□□ -1.81
SSR1-202ENST00000397511 ATOX1O00244 68 aa3.74□□□□□ -1.81
SSR1-202ENST00000397511 EIF4EBP3O60516 100 aaPredicted RBP3.74□□□□□ -1.81
SSR1-202ENST00000397511 IGHV4-59P01825 116 aa3.74□□□□□ -1.81
SSR1-202ENST00000397511 C9orf47Q6ZRZ4 202 aa3.74□□□□□ -1.81
SSR1-202ENST00000397511 ZFAND2AQ8N6M9 145 aa3.74□□□□□ -1.81
SSR1-202ENST00000397511 KLK9Q9UKQ9 250 aa3.74□□□□□ -1.81
SSR1-202ENST00000397511 ICOSQ9Y6W8 199 aa3.74□□□□□ -1.81
SSR1-202ENST00000397511 IGHV3-73A0A0B4J1V6 119 aa3.74□□□□□ -1.81
SSR1-202ENST00000397511 hADV29S1A0JD25 119 aa3.74□□□□□ -1.81
SSR1-202ENST00000397511 RPL39P62891 51 aaKnown RBP3.74□□□□□ -1.81
SSR1-202ENST00000397511 DPH3Q96FX2 82 aa3.74□□□□□ -1.81
SSR1-202ENST00000397511 PSMG3-AS1Q96PY0 264 aa3.74□□□□□ -1.81
SSR1-202ENST00000397511 IGHV3-64A0A075B6Q5 118 aa3.73□□□□□ -1.81
SSR1-202ENST00000397511 IGHV4-4A0A075B6R2 117 aa3.73□□□□□ -1.81
SSR1-202ENST00000397511 TRAV21A0A0B4J279 112 aa3.73□□□□□ -1.81
SSR1-202ENST00000397511 TMEM223A0PJW6 202 aa3.73□□□□□ -1.81
SSR1-202ENST00000397511 PPP1R17O96001 155 aa3.73□□□□□ -1.81
SSR1-202ENST00000397511 CRYGDP07320 174 aa3.73□□□□□ -1.81
SSR1-202ENST00000397511 HRCT1Q6UXD1 115 aa3.73□□□□□ -1.81
SSR1-202ENST00000397511 C9orf139Q6ZV77 190 aa3.73□□□□□ -1.81
SSR1-202ENST00000397511 AMELXQ99217 191 aa3.73□□□□□ -1.81
SSR1-202ENST00000397511 USP24Q9UPU5 2620 aa3.73□□□□□ -1.81
SSR1-202ENST00000397511 RNASE3P12724 160 aaKnown RBP3.73□□□□□ -1.81
SSR1-202ENST00000397511 MALP21145 153 aa3.73□□□□□ -1.81
SSR1-202ENST00000397511 SPINK13Q1W4C9 94 aa3.73□□□□□ -1.81
SSR1-202ENST00000397511 DEFB136Q30KP8 78 aa3.73□□□□□ -1.81
SSR1-202ENST00000397511 TMEM141Q96I45 108 aa3.73□□□□□ -1.81
SSR1-202ENST00000397511 FAM223BA6NKX1 122 aa3.72□□□□□ -1.81
SSR1-202ENST00000397511 LST1O00453 97 aa3.72□□□□□ -1.81
SSR1-202ENST00000397511 LEPROTO15243 131 aa3.72□□□□□ -1.81
SSR1-202ENST00000397511 SYNJ2BPP57105 145 aa3.72□□□□□ -1.81
SSR1-202ENST00000397511 C4orf26Q17RF5 130 aa3.72□□□□□ -1.81
SSR1-202ENST00000397511 FAM223AQ8IWN6 122 aa3.72□□□□□ -1.81
SSR1-202ENST00000397511 C2orf48Q96LS8 159 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 256.7 ms