RNA–Protein interactions for RNA: ENST00000396830.2

IFFO1-203, Transcript of intermediate filament family orphan 1, humanhuman

TSL 1 (best)

Gene IFFO1, Length 1,776 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-203ENST00000396830 CIDEAO60543 219 aa12.89□□□□□ -0.35
IFFO1-203ENST00000396830 P0DMU3 169 aa12.89□□□□□ -0.35
IFFO1-203ENST00000396830 FAM231AP0DMU4 169 aa12.89□□□□□ -0.35
IFFO1-203ENST00000396830 FAM231CP0DMU5 169 aa12.89□□□□□ -0.35
IFFO1-203ENST00000396830 TCTAP57738 103 aa12.89□□□□□ -0.35
IFFO1-203ENST00000396830 OR4C5Q8NGB2 326 aa12.89□□□□□ -0.35
IFFO1-203ENST00000396830 PYGO1Q9Y3Y4 419 aa12.89□□□□□ -0.35
IFFO1-203ENST00000396830 NACAE9PAV3 2078 aa12.89□□□□□ -0.35
IFFO1-203ENST00000396830 GIG44P09565 113 aaPredicted RBP12.89□□□□□ -0.35
IFFO1-203ENST00000396830 CRYBA4P53673 196 aa12.89□□□□□ -0.35
IFFO1-203ENST00000396830 TRGV1A0A0A0MS02 117 aa12.88□□□□□ -0.35
IFFO1-203ENST00000396830 E9PLD3 99 aa12.88□□□□□ -0.35
IFFO1-203ENST00000396830 OR11H2Q8NH07 326 aa12.88□□□□□ -0.35
IFFO1-203ENST00000396830 TRAV4A0A0B4J268 109 aa12.87□□□□□ -0.35
IFFO1-203ENST00000396830 HERVK_113P61574 105 aa12.87□□□□□ -0.35
IFFO1-203ENST00000396830 NOTCH3Q9UM47 2321 aa12.87□□□□□ -0.35
IFFO1-203ENST00000396830 TRBV10-1A0A0K0K1A3 114 aa12.86□□□□□ -0.35
IFFO1-203ENST00000396830 A6NDN8 102 aa12.86□□□□□ -0.35
IFFO1-203ENST00000396830 RPL35AP18077 110 aaKnown RBP12.86□□□□□ -0.35
IFFO1-203ENST00000396830 Q6ZVH6 145 aa12.86□□□□□ -0.35
IFFO1-203ENST00000396830 CSNK1G2-AS1Q8NCQ2 148 aa12.86□□□□□ -0.35
IFFO1-203ENST00000396830 WFDC10AQ9H1F0 79 aa12.86□□□□□ -0.35
IFFO1-203ENST00000396830 IGLV4-69A0A075B6H9 119 aa12.86□□□□□ -0.35
IFFO1-203ENST00000396830 UBE2V1Q13404 147 aa12.86□□□□□ -0.35
IFFO1-203ENST00000396830 Q6ZSN1 163 aa12.86□□□□□ -0.35
IFFO1-203ENST00000396830 TRBV25-1A0A075B6N4 114 aa12.85□□□□□ -0.35
IFFO1-203ENST00000396830 RRN3P1Q2M238 152 aa12.85□□□□□ -0.35
IFFO1-203ENST00000396830 TRAV8-6A0A0B4J262 113 aa12.84□□□□□ -0.35
IFFO1-203ENST00000396830 C11orf86A6NJI1 115 aa12.84□□□□□ -0.35
IFFO1-203ENST00000396830 TAL2Q16559 108 aa12.84□□□□□ -0.35
IFFO1-203ENST00000396830 NFE4Q86UQ8 179 aa12.84□□□□□ -0.35
IFFO1-203ENST00000396830 OVOL2Q9BRP0 275 aa12.84□□□□□ -0.35
IFFO1-203ENST00000396830 CHAC1Q9BUX1 264 aa12.84□□□□□ -0.35
IFFO1-203ENST00000396830 TRRAPQ9Y4A5 3859 aa12.84□□□□□ -0.35
IFFO1-203ENST00000396830 COTL1Q14019 142 aa12.84□□□□□ -0.35
IFFO1-203ENST00000396830 DEFB104AQ8WTQ1 72 aa12.84□□□□□ -0.35
IFFO1-203ENST00000396830 VCX2Q9H322 139 aa12.84□□□□□ -0.35
IFFO1-203ENST00000396830 SPANXA1Q9NS26 97 aa12.84□□□□□ -0.35
IFFO1-203ENST00000396830 CCL25O15444 150 aa12.83□□□□□ -0.36
IFFO1-203ENST00000396830 WIPF1O43516 503 aa12.83□□□□□ -0.36
IFFO1-203ENST00000396830 IGLV4-3A0A075B6K6 122 aa12.82□□□□□ -0.36
IFFO1-203ENST00000396830 MYMXA0A1B0GTQ4 84 aa12.82□□□□□ -0.36
IFFO1-203ENST00000396830 OXLD1Q5BKU9 147 aa12.82□□□□□ -0.36
IFFO1-203ENST00000396830 Q6ZTI0 123 aa12.82□□□□□ -0.36
IFFO1-203ENST00000396830 TRBV7-3A0A075B6L6 115 aa12.81□□□□□ -0.36
IFFO1-203ENST00000396830 K7EQD1 137 aa12.81□□□□□ -0.36
IFFO1-203ENST00000396830 PTTG1IPP53801 180 aa12.81□□□□□ -0.36
IFFO1-203ENST00000396830 RPL36AP83881 106 aaKnown RBP12.81□□□□□ -0.36
IFFO1-203ENST00000396830 RPL36ALQ969Q0 106 aaKnown RBP12.81□□□□□ -0.36
IFFO1-203ENST00000396830 PRADC1Q9BSG0 188 aa12.81□□□□□ -0.36
IFFO1-203ENST00000396830 NOP10Q9NPE3 64 aaKnown RBP12.81□□□□□ -0.36
IFFO1-203ENST00000396830 PLAC8L1A1L4L8 177 aa12.81□□□□□ -0.36
IFFO1-203ENST00000396830 TTTY13Q9BZ97 58 aa12.81□□□□□ -0.36
IFFO1-203ENST00000396830 DAZ4Q86SG3 579 aaKnown RBP12.8□□□□□ -0.36
IFFO1-203ENST00000396830 MAPKAPK5-AS1Q8N8E1 139 aa12.8□□□□□ -0.36
IFFO1-203ENST00000396830 ZNF479Q96JC4 524 aa12.8□□□□□ -0.36
IFFO1-203ENST00000396830 CHCHD7Q9BUK0 85 aa12.8□□□□□ -0.36
IFFO1-203ENST00000396830 DAZ3Q9NR90 486 aaKnown RBP12.8□□□□□ -0.36
IFFO1-203ENST00000396830 AMELXQ99217 191 aa12.79□□□□□ -0.36
IFFO1-203ENST00000396830 H3BRM9 83 aa12.79□□□□□ -0.36
IFFO1-203ENST00000396830 TMEM170BQ5T4T1 132 aa12.79□□□□□ -0.36
IFFO1-203ENST00000396830 TIMM21Q9BVV7 248 aa12.79□□□□□ -0.36
IFFO1-203ENST00000396830 TM2D2Q9BX73 214 aa12.79□□□□□ -0.36
IFFO1-203ENST00000396830 SMAGPQ0VAQ4 97 aa12.78□□□□□ -0.36
IFFO1-203ENST00000396830 ZNRF2Q8NHG8 242 aa12.78□□□□□ -0.36
IFFO1-203ENST00000396830 UBE2D4Q9Y2X8 147 aa12.78□□□□□ -0.36
IFFO1-203ENST00000396830 TRGV2A0A075B6R0 118 aa12.77□□□□□ -0.36
IFFO1-203ENST00000396830 SMIM9A6NGZ8 99 aa12.77□□□□□ -0.36
IFFO1-203ENST00000396830 Q9UF83 564 aa12.77□□□□□ -0.36
IFFO1-203ENST00000396830 KRTAP10-11P60412 298 aa12.76□□□□□ -0.37
IFFO1-203ENST00000396830 VAMP3Q15836 100 aa12.76□□□□□ -0.37
IFFO1-203ENST00000396830 CEND1Q8N111 149 aa12.76□□□□□ -0.37
IFFO1-203ENST00000396830 OPRPNQ99935 248 aaPredicted RBP12.76□□□□□ -0.37
IFFO1-203ENST00000396830 TRBV6-4A0A1B0GX49 114 aa12.76□□□□□ -0.37
IFFO1-203ENST00000396830 ZNF815PA8K554 130 aa12.76□□□□□ -0.37
IFFO1-203ENST00000396830 GCSHP23434 173 aa12.76□□□□□ -0.37
IFFO1-203ENST00000396830 EMP1P54849 157 aa12.76□□□□□ -0.37
IFFO1-203ENST00000396830 MRPS36P82909 103 aaKnown RBP12.76□□□□□ -0.37
IFFO1-203ENST00000396830 SLC25A29Q8N8R3 303 aa12.75□□□□□ -0.37
IFFO1-203ENST00000396830 PHLDA1Q8WV24 401 aaPredicted RBP12.75□□□□□ -0.37
IFFO1-203ENST00000396830 CMYA5Q8N3K9 4069 aa12.75□□□□□ -0.37
IFFO1-203ENST00000396830 PKD1L1Q8TDX9 2849 aa12.74□□□□□ -0.37
IFFO1-203ENST00000396830 TMEM223A0PJW6 202 aa12.74□□□□□ -0.37
IFFO1-203ENST00000396830 GAGE12BA1L429 117 aa12.74□□□□□ -0.37
IFFO1-203ENST00000396830 GAGE7O76087 117 aa12.74□□□□□ -0.37
IFFO1-203ENST00000396830 GAGE12FP0CL80 117 aa12.74□□□□□ -0.37
IFFO1-203ENST00000396830 GAGE12GP0CL81 117 aa12.74□□□□□ -0.37
IFFO1-203ENST00000396830 GAGE12IP0CL82 117 aa12.74□□□□□ -0.37
IFFO1-203ENST00000396830 UBE2D3P61077 147 aa12.74□□□□□ -0.37
IFFO1-203ENST00000396830 UBE2D2P62837 147 aa12.74□□□□□ -0.37
IFFO1-203ENST00000396830 KIR2DL5BQ8NHK3 375 aa12.74□□□□□ -0.37
IFFO1-203ENST00000396830 IGHV3-38A0A0C4DH36 116 aa12.74□□□□□ -0.37
IFFO1-203ENST00000396830 C9orf118A6NHY6 69 aa12.74□□□□□ -0.37
IFFO1-203ENST00000396830 G3V4G9 280 aa12.74□□□□□ -0.37
IFFO1-203ENST00000396830 HIST1H4GQ99525 98 aa12.74□□□□□ -0.37
IFFO1-203ENST00000396830 LEPROTO15243 131 aa12.73□□□□□ -0.37
IFFO1-203ENST00000396830 SMIM13P0DJ93 91 aa12.73□□□□□ -0.37
IFFO1-203ENST00000396830 GTSF1LQ9H1H1 148 aa12.73□□□□□ -0.37
IFFO1-203ENST00000396830 ANK2Q01484 3957 aa12.73□□□□□ -0.37
IFFO1-203ENST00000396830 ZNF22P17026 224 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms