RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 PPP1R17O96001 155 aa-0.49□□□□□ -2.49
CMC1-202ENST00000396610 ALX1Q15699 326 aa-0.49□□□□□ -2.49
CMC1-202ENST00000396610 SMIM21Q3B7S5 101 aa-0.49□□□□□ -2.49
CMC1-202ENST00000396610 Q5VSD8 79 aa-0.49□□□□□ -2.49
CMC1-202ENST00000396610 TCEAL4Q96EI5 215 aa-0.49□□□□□ -2.49
CMC1-202ENST00000396610 SDF2Q99470 211 aa-0.49□□□□□ -2.49
CMC1-202ENST00000396610 SPCS1Q9Y6A9 102 aa-0.49□□□□□ -2.49
CMC1-202ENST00000396610 R4GMQ9 66 aa-0.49□□□□□ -2.49
CMC1-202ENST00000396610 FHAD1B1AJZ9 1412 aa-0.49□□□□□ -2.49
CMC1-202ENST00000396610 MYCBP2O75592 4640 aa-0.49□□□□□ -2.49
CMC1-202ENST00000396610 NHSL1Q5SYE7 1610 aa-0.49□□□□□ -2.49
CMC1-202ENST00000396610 PARP14Q460N5 1801 aa-0.5□□□□□ -2.49
CMC1-202ENST00000396610 TENM2Q9NT68 2774 aa-0.5□□□□□ -2.49
CMC1-202ENST00000396610 SIX6O95475 246 aa-0.5□□□□□ -2.49
CMC1-202ENST00000396610 CCL18P55774 89 aa-0.5□□□□□ -2.49
CMC1-202ENST00000396610 Q8IZM0 81 aa-0.5□□□□□ -2.49
CMC1-202ENST00000396610 ZNF609O15014 1411 aa-0.5□□□□□ -2.49
CMC1-202ENST00000396610 ARFGEF1Q9Y6D6 1849 aa-0.5□□□□□ -2.49
CMC1-202ENST00000396610 BCE1O60756 84 aa-0.51□□□□□ -2.49
CMC1-202ENST00000396610 VWFP04275 2813 aa-0.51□□□□□ -2.49
CMC1-202ENST00000396610 SMCO1Q147U7 214 aa-0.51□□□□□ -2.49
CMC1-202ENST00000396610 TMEM191AQ9H0A3 160 aa-0.51□□□□□ -2.49
CMC1-202ENST00000396610 BIVM-ERCC5R4GMW8 1640 aa-0.52□□□□□ -2.49
CMC1-202ENST00000396610 IFT140Q96RY7 1462 aa-0.52□□□□□ -2.49
CMC1-202ENST00000396610 CASKIN1Q8WXD9 1431 aa-0.52□□□□□ -2.49
CMC1-202ENST00000396610 HCG22E2RYF7 251 aa-0.52□□□□□ -2.49
CMC1-202ENST00000396610 M0R135 149 aa-0.52□□□□□ -2.49
CMC1-202ENST00000396610 S100A3P33764 101 aa-0.52□□□□□ -2.49
CMC1-202ENST00000396610 DPH3Q96FX2 82 aa-0.52□□□□□ -2.49
CMC1-202ENST00000396610 ZNF518AQ6AHZ1 1483 aa-0.53□□□□□ -2.49
CMC1-202ENST00000396610 MYH9P35579 1960 aaKnown RBP-0.53□□□□□ -2.49
CMC1-202ENST00000396610 MYH6P13533 1939 aa-0.53□□□□□ -2.49
CMC1-202ENST00000396610 SPRR2DP22532 72 aa-0.53□□□□□ -2.49
CMC1-202ENST00000396610 SPRR1AP35321 89 aa-0.53□□□□□ -2.49
CMC1-202ENST00000396610 HAMPP81172 84 aa-0.53□□□□□ -2.49
CMC1-202ENST00000396610 SPAG11BQ08648 103 aa-0.53□□□□□ -2.49
CMC1-202ENST00000396610 C10orf128Q5T292 105 aa-0.53□□□□□ -2.49
CMC1-202ENST00000396610 SMIM4Q8WVI0 70 aa-0.53□□□□□ -2.49
CMC1-202ENST00000396610 AQP10Q96PS8 301 aa-0.53□□□□□ -2.49
CMC1-202ENST00000396610 CCDC167Q9P0B6 97 aa-0.53□□□□□ -2.49
CMC1-202ENST00000396610 USF3Q68DE3 2245 aa-0.54□□□□□ -2.5
CMC1-202ENST00000396610 TRAV13-2A0A0B4J235 113 aa-0.54□□□□□ -2.5
CMC1-202ENST00000396610 PIGBOS1A0A0B4J2F0 54 aa-0.54□□□□□ -2.5
CMC1-202ENST00000396610 GVINP1Q7Z2Y8 2422 aa-0.54□□□□□ -2.5
CMC1-202ENST00000396610 LRRC37A3O60309 1634 aa-0.55□□□□□ -2.5
CMC1-202ENST00000396610 CTXND1A0A1B0GTU2 59 aa-0.55□□□□□ -2.5
CMC1-202ENST00000396610 LOC105371267A0A1B0GV96 52 aa-0.55□□□□□ -2.5
CMC1-202ENST00000396610 HIST1H1DP16402 221 aaKnown RBP-0.55□□□□□ -2.5
CMC1-202ENST00000396610 RBM3P98179 157 aaKnown RBP-0.55□□□□□ -2.5
CMC1-202ENST00000396610 KRTAP19-7Q3SYF9 63 aa-0.55□□□□□ -2.5
CMC1-202ENST00000396610 NF1P21359 2839 aa-0.55□□□□□ -2.5
CMC1-202ENST00000396610 WNK1Q9H4A3 2382 aa-0.56□□□□□ -2.5
CMC1-202ENST00000396610 SPAARA0A1B0GVQ0 90 aa-0.56□□□□□ -2.5
CMC1-202ENST00000396610 SPAG11AQ6PDA7 123 aa-0.56□□□□□ -2.5
CMC1-202ENST00000396610 PFDN5Q99471 154 aa-0.56□□□□□ -2.5
CMC1-202ENST00000396610 AGPAT4-IT1Q9H0P7 198 aa-0.56□□□□□ -2.5
CMC1-202ENST00000396610 SIPA1L3O60292 1781 aaPredicted RBP-0.56□□□□□ -2.5
CMC1-202ENST00000396610 IFT172Q9UG01 1749 aa-0.56□□□□□ -2.5
CMC1-202ENST00000396610 NBEAL1Q6ZS30 2694 aa-0.56□□□□□ -2.5
CMC1-202ENST00000396610 ACANP16112 2415 aa-0.56□□□□□ -2.5
CMC1-202ENST00000396610 FAT2Q9NYQ8 4349 aa-0.57□□□□□ -2.5
CMC1-202ENST00000396610 GOLGA4Q13439 2230 aaKnown RBP-0.57□□□□□ -2.5
CMC1-202ENST00000396610 TNXBP22105 4242 aa-0.57□□□□□ -2.5
CMC1-202ENST00000396610 MAP1AP78559 2803 aaPredicted RBP-0.57□□□□□ -2.5
CMC1-202ENST00000396610 PRM1P04553 51 aa-0.57□□□□□ -2.5
CMC1-202ENST00000396610 TTC9CQ8N5M4 171 aa-0.57□□□□□ -2.5
CMC1-202ENST00000396610 PDCD10Q9BUL8 212 aa-0.57□□□□□ -2.5
CMC1-202ENST00000396610 TP53AIP1Q9HCN2 124 aa-0.57□□□□□ -2.5
CMC1-202ENST00000396610 CSPG4Q6UVK1 2322 aa-0.57□□□□□ -2.5
CMC1-202ENST00000396610 PDZD2O15018 2839 aa-0.57□□□□□ -2.5
CMC1-202ENST00000396610 STAB2Q8WWQ8 2551 aa-0.57□□□□□ -2.5
CMC1-202ENST00000396610 HECTD4Q9Y4D8 3996 aa-0.58□□□□□ -2.5
CMC1-202ENST00000396610 COPS9Q8WXC6 57 aa-0.58□□□□□ -2.5
CMC1-202ENST00000396610 PI4KAP42356 2102 aa-0.58□□□□□ -2.5
CMC1-202ENST00000396610 SPTA1P02549 2419 aa-0.58□□□□□ -2.5
CMC1-202ENST00000396610 PXDNQ92626 1479 aa-0.59□□□□□ -2.5
CMC1-202ENST00000396610 ARPC4P59998 168 aa-0.59□□□□□ -2.5
CMC1-202ENST00000396610 DCDP81605 110 aaKnown RBP-0.59□□□□□ -2.5
CMC1-202ENST00000396610 LENEPQ9Y5L5 61 aa-0.59□□□□□ -2.5
CMC1-202ENST00000396610 V9GYH0 126 aa-0.59□□□□□ -2.5
CMC1-202ENST00000396610 SETXQ7Z333 2677 aaKnown RBP-0.59□□□□□ -2.5
CMC1-202ENST00000396610 CREBBPQ92793 2442 aa-0.59□□□□□ -2.5
CMC1-202ENST00000396610 MRC1P22897 1456 aa-0.6□□□□□ -2.5
CMC1-202ENST00000396610 BSNQ9UPA5 3926 aa-0.6□□□□□ -2.51
CMC1-202ENST00000396610 FXYD6-FXYD2A0A087WZ82 144 aa-0.6□□□□□ -2.51
CMC1-202ENST00000396610 TMEM170BQ5T4T1 132 aa-0.6□□□□□ -2.51
CMC1-202ENST00000396610 ALMS1Q8TCU4 4167 aa-0.6□□□□□ -2.51
CMC1-202ENST00000396610 ATRQ13535 2644 aa-0.61□□□□□ -2.51
CMC1-202ENST00000396610 C10orf71Q711Q0 1435 aa-0.61□□□□□ -2.51
CMC1-202ENST00000396610 PPRC1Q5VV67 1664 aaKnown RBP-0.61□□□□□ -2.51
CMC1-202ENST00000396610 CHD8Q9HCK8 2581 aa-0.61□□□□□ -2.51
CMC1-202ENST00000396610 HERC1Q15751 4861 aa-0.61□□□□□ -2.51
CMC1-202ENST00000396610 C12orf73Q69YU5 71 aa-0.61□□□□□ -2.51
CMC1-202ENST00000396610 PAIP2BQ9ULR5 123 aaKnown RBP-0.61□□□□□ -2.51
CMC1-202ENST00000396610 ERCC6L2Q5T890 1561 aa-0.62□□□□□ -2.51
CMC1-202ENST00000396610 COX17Q14061 63 aa-0.62□□□□□ -2.51
CMC1-202ENST00000396610 Q8N8P6 123 aa-0.62□□□□□ -2.51
CMC1-202ENST00000396610 CEP152O94986 1710 aa-0.63□□□□□ -2.51
CMC1-202ENST00000396610 TRBV6-1A0A0K0K1D8 114 aa-0.63□□□□□ -2.51
CMC1-202ENST00000396610 I3L2K1 104 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms