RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ZNF56Q15929 161 aa9.82□□□□□ -0.84
TRIM40-207ENST00000396581 LY6EQ16553 131 aa9.82□□□□□ -0.84
TRIM40-207ENST00000396581 Q8N1Y9 231 aa9.82□□□□□ -0.84
TRIM40-207ENST00000396581 PYGO1Q9Y3Y4 419 aa9.82□□□□□ -0.84
TRIM40-207ENST00000396581 TLN2Q9Y4G6 2542 aa9.81□□□□□ -0.84
TRIM40-207ENST00000396581 RAX2Q96IS3 184 aa9.81□□□□□ -0.84
TRIM40-207ENST00000396581 CLUHP3Q96NS8 147 aa9.81□□□□□ -0.84
TRIM40-207ENST00000396581 CITED1Q99966 193 aa9.81□□□□□ -0.84
TRIM40-207ENST00000396581 IGHV1OR15-1A0A075B7D0 117 aa9.81□□□□□ -0.84
TRIM40-207ENST00000396581 FSHBP01225 129 aa9.81□□□□□ -0.84
TRIM40-207ENST00000396581 LITAFQ99732 161 aa9.81□□□□□ -0.84
TRIM40-207ENST00000396581 TRAV2A0A0B4J234 112 aa9.8□□□□□ -0.84
TRIM40-207ENST00000396581 A0A0J9YXY3 114 aa9.8□□□□□ -0.84
TRIM40-207ENST00000396581 TRBV30A0A0K0K1B3 111 aa9.8□□□□□ -0.84
TRIM40-207ENST00000396581 C9JAW5 83 aa9.8□□□□□ -0.84
TRIM40-207ENST00000396581 WFDC12Q8WWY7 111 aa9.8□□□□□ -0.84
TRIM40-207ENST00000396581 FAM104AQ969W3 186 aa9.8□□□□□ -0.84
TRIM40-207ENST00000396581 PDZD2O15018 2839 aa9.8□□□□□ -0.84
TRIM40-207ENST00000396581 A0A0J9YXV3 536 aa9.79□□□□□ -0.84
TRIM40-207ENST00000396581 K7EQG2 157 aa9.79□□□□□ -0.84
TRIM40-207ENST00000396581 MRPS36P82909 103 aaKnown RBP9.79□□□□□ -0.84
TRIM40-207ENST00000396581 ZNF469Q96JG9 3925 aaPredicted RBP9.79□□□□□ -0.84
TRIM40-207ENST00000396581 MXRA5Q9NR99 2828 aa9.79□□□□□ -0.84
TRIM40-207ENST00000396581 PSMB8P28062 276 aa9.79□□□□□ -0.84
TRIM40-207ENST00000396581 RPL13AP40429 203 aaKnown RBP9.79□□□□□ -0.84
TRIM40-207ENST00000396581 ATXN8Q156A1 80 aa9.79□□□□□ -0.84
TRIM40-207ENST00000396581 TRAV12-2A0A075B6T6 113 aa9.78□□□□□ -0.84
TRIM40-207ENST00000396581 DEFB112Q30KQ8 113 aa9.78□□□□□ -0.84
TRIM40-207ENST00000396581 LINC01620Q4KN68 170 aa9.78□□□□□ -0.84
TRIM40-207ENST00000396581 ELANEP08246 267 aa9.78□□□□□ -0.84
TRIM40-207ENST00000396581 IGHV3-30-3P0DP02 117 aa9.78□□□□□ -0.84
TRIM40-207ENST00000396581 SNRPD3P62318 126 aaKnown RBP9.78□□□□□ -0.84
TRIM40-207ENST00000396581 WFDC11Q8NEX6 87 aa9.78□□□□□ -0.84
TRIM40-207ENST00000396581 SPANXDQ9BXN6 97 aa9.78□□□□□ -0.84
TRIM40-207ENST00000396581 SPANXCQ9NY87 97 aa9.78□□□□□ -0.84
TRIM40-207ENST00000396581 FLNAP21333 2647 aaKnown RBP9.77□□□□□ -0.85
TRIM40-207ENST00000396581 ZFAND6Q6FIF0 208 aa9.77□□□□□ -0.85
TRIM40-207ENST00000396581 HECTD1Q9ULT8 2610 aa9.77□□□□□ -0.85
TRIM40-207ENST00000396581 TRBV10-2A0A0K0K1G8 114 aa9.76□□□□□ -0.85
TRIM40-207ENST00000396581 RNF183Q96D59 192 aa9.76□□□□□ -0.85
TRIM40-207ENST00000396581 TRGV11A0A075B6L2 103 aa9.76□□□□□ -0.85
TRIM40-207ENST00000396581 IGHV3-64A0A075B6Q5 118 aa9.76□□□□□ -0.85
TRIM40-207ENST00000396581 TMEM89A2RUT3 159 aa9.76□□□□□ -0.85
TRIM40-207ENST00000396581 IGHV1-58A0A0C4DH39 117 aa9.75□□□□□ -0.85
TRIM40-207ENST00000396581 TRIAP1O43715 76 aa9.75□□□□□ -0.85
TRIM40-207ENST00000396581 IGHV4-59P01825 116 aa9.75□□□□□ -0.85
TRIM40-207ENST00000396581 SPINK13Q1W4C9 94 aa9.75□□□□□ -0.85
TRIM40-207ENST00000396581 TEX29Q8N6K0 151 aa9.75□□□□□ -0.85
TRIM40-207ENST00000396581 TIMM21Q9BVV7 248 aa9.75□□□□□ -0.85
TRIM40-207ENST00000396581 Q6Q795 121 aa9.75□□□□□ -0.85
TRIM40-207ENST00000396581 NTN5Q8WTR8 489 aaPredicted RBP9.75□□□□□ -0.85
TRIM40-207ENST00000396581 Q6YL49 198 aa9.74□□□□□ -0.85
TRIM40-207ENST00000396581 SVIPQ8NHG7 77 aa9.74□□□□□ -0.85
TRIM40-207ENST00000396581 SONP18583 2426 aaKnown RBP9.74□□□□□ -0.85
TRIM40-207ENST00000396581 NOTCH2Q04721 2471 aa9.73□□□□□ -0.85
TRIM40-207ENST00000396581 H7C2G1 150 aa9.73□□□□□ -0.85
TRIM40-207ENST00000396581 IGKV3-20P01619 116 aa9.73□□□□□ -0.85
TRIM40-207ENST00000396581 CD28P10747 220 aa9.73□□□□□ -0.85
TRIM40-207ENST00000396581 PIK3CD-AS1Q5SR53 167 aa9.73□□□□□ -0.85
TRIM40-207ENST00000396581 SPXQ9BT56 116 aa9.73□□□□□ -0.85
TRIM40-207ENST00000396581 ACANP16112 2415 aa9.73□□□□□ -0.85
TRIM40-207ENST00000396581 TINCRA0A1B0GVN0 87 aa9.73□□□□□ -0.85
TRIM40-207ENST00000396581 NHLRC4P0CG21 123 aaPredicted RBP9.73□□□□□ -0.85
TRIM40-207ENST00000396581 Q1RN00 199 aa9.73□□□□□ -0.85
TRIM40-207ENST00000396581 ANAPC13Q9BS18 74 aa9.73□□□□□ -0.85
TRIM40-207ENST00000396581 A8MTW9 85 aa9.72□□□□□ -0.85
TRIM40-207ENST00000396581 MIAQ16674 131 aa9.72□□□□□ -0.85
TRIM40-207ENST00000396581 ADAMTSL4-AS1Q5T5F5 129 aa9.72□□□□□ -0.85
TRIM40-207ENST00000396581 VSIG2Q96IQ7 327 aa9.72□□□□□ -0.85
TRIM40-207ENST00000396581 TRAV8-3A0A0A6YYJ7 113 aa9.71□□□□□ -0.85
TRIM40-207ENST00000396581 H3BT86 120 aa9.71□□□□□ -0.85
TRIM40-207ENST00000396581 TIMM17BO60830 172 aa9.71□□□□□ -0.85
TRIM40-207ENST00000396581 RBMY1A1P0DJD3 496 aaKnown RBP9.71□□□□□ -0.85
TRIM40-207ENST00000396581 RBMY1CP0DJD4 496 aa9.71□□□□□ -0.85
TRIM40-207ENST00000396581 RBMY1FQ15415 496 aaKnown RBP9.71□□□□□ -0.85
TRIM40-207ENST00000396581 TMEM95Q3KNT9 176 aa9.71□□□□□ -0.85
TRIM40-207ENST00000396581 VPREB3Q9UKI3 123 aa9.71□□□□□ -0.85
TRIM40-207ENST00000396581 ICOSQ9Y6W8 199 aa9.71□□□□□ -0.85
TRIM40-207ENST00000396581 CHCHD7Q9BUK0 85 aa9.71□□□□□ -0.86
TRIM40-207ENST00000396581 SPANXA1Q9NS26 97 aa9.71□□□□□ -0.86
TRIM40-207ENST00000396581 NDUFA12Q9UI09 145 aa9.71□□□□□ -0.86
TRIM40-207ENST00000396581 MYO9AB2RTY4 2548 aa9.71□□□□□ -0.86
TRIM40-207ENST00000396581 TEX49A0A1B0GTD5 131 aa9.7□□□□□ -0.86
TRIM40-207ENST00000396581 GAGE2BQ13066 116 aa9.7□□□□□ -0.86
TRIM40-207ENST00000396581 GAGE2EQ4V326 116 aa9.7□□□□□ -0.86
TRIM40-207ENST00000396581 GAGE2DQ9UEU5 116 aa9.7□□□□□ -0.86
TRIM40-207ENST00000396581 TRAV4A0A0B4J268 109 aa9.7□□□□□ -0.86
TRIM40-207ENST00000396581 ADARB2-AS1A8MUL3 147 aa9.7□□□□□ -0.86
TRIM40-207ENST00000396581 H3BMM0 161 aa9.7□□□□□ -0.86
TRIM40-207ENST00000396581 SNCGO76070 127 aa9.7□□□□□ -0.86
TRIM40-207ENST00000396581 DEFB121Q5J5C9 76 aa9.7□□□□□ -0.86
TRIM40-207ENST00000396581 UBE2WQ96B02 151 aa9.7□□□□□ -0.86
TRIM40-207ENST00000396581 UBE2D4Q9Y2X8 147 aa9.7□□□□□ -0.86
TRIM40-207ENST00000396581 H7C423 109 aa9.69□□□□□ -0.86
TRIM40-207ENST00000396581 CRLF1O75462 422 aa9.69□□□□□ -0.86
TRIM40-207ENST00000396581 GAGE5Q13069 117 aa9.69□□□□□ -0.86
TRIM40-207ENST00000396581 GAGE6Q13070 117 aa9.69□□□□□ -0.86
TRIM40-207ENST00000396581 C10orf99Q6UWK7 81 aa9.69□□□□□ -0.86
TRIM40-207ENST00000396581 TRAV8-4A0A0B4J246 113 aa9.68□□□□□ -0.86
TRIM40-207ENST00000396581 IFITM1P13164 125 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms