RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 PYGO1Q9Y3Y4 419 aa4.68□□□□□ -1.66
NXF3-201ENST00000395065 CSDC2Q9Y534 153 aaKnown RBP4.68□□□□□ -1.66
NXF3-201ENST00000395065 PRRC2AP48634 2157 aaKnown RBP4.67□□□□□ -1.66
NXF3-201ENST00000395065 IGHV1-58A0A0C4DH39 117 aa4.67□□□□□ -1.66
NXF3-201ENST00000395065 ID1P41134 155 aa4.67□□□□□ -1.66
NXF3-201ENST00000395065 CXCL5P42830 114 aa4.67□□□□□ -1.66
NXF3-201ENST00000395065 RPS28P62857 69 aaKnown RBP4.67□□□□□ -1.66
NXF3-201ENST00000395065 CDSNQ15517 529 aa4.67□□□□□ -1.66
NXF3-201ENST00000395065 C5orf38Q86SI9 138 aa4.67□□□□□ -1.66
NXF3-201ENST00000395065 CLEC2BQ92478 149 aa4.67□□□□□ -1.66
NXF3-201ENST00000395065 FAM104AQ969W3 186 aa4.67□□□□□ -1.66
NXF3-201ENST00000395065 PRORYQ9H606 182 aa4.67□□□□□ -1.66
NXF3-201ENST00000395065 TEX15Q9BXT5 2789 aa4.67□□□□□ -1.66
NXF3-201ENST00000395065 UBR5O95071 2799 aaPredicted RBP4.67□□□□□ -1.66
NXF3-201ENST00000395065 IGHV3-64A0A075B6Q5 118 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 A0A087WWL8 130 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 G3V318 75 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 NPFFO15130 113 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 TIMM17BO60830 172 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 C5orf47Q569G3 176 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 C19orf54Q5BKX5 351 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 C9orf153Q5TBE3 101 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 SMCR5Q8TEV8 140 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 DEFB104AQ8WTQ1 72 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 C9orf85Q96MD7 179 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 TIMM21Q9BVV7 248 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 CELSR1Q9NYQ6 3014 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 NDUFA4O00483 81 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 CCL21O00585 134 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 PRSS2P07478 247 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 DEFB1P60022 68 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 HERVK_113P63121 156 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 C3orf56Q8N813 242 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 C2orf48Q96LS8 159 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 SPXQ9BT56 116 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 ZNF256Q9Y2P7 627 aaPredicted RBP4.66□□□□□ -1.66
NXF3-201ENST00000395065 SPTA1P02549 2419 aa4.66□□□□□ -1.66
NXF3-201ENST00000395065 CSMD2Q7Z408 3487 aa4.65□□□□□ -1.66
NXF3-201ENST00000395065 FAM223BA6NKX1 122 aa4.65□□□□□ -1.67
NXF3-201ENST00000395065 F5H697 171 aa4.65□□□□□ -1.67
NXF3-201ENST00000395065 F6UB75 175 aa4.65□□□□□ -1.67
NXF3-201ENST00000395065 CRYGAP11844 174 aa4.65□□□□□ -1.67
NXF3-201ENST00000395065 COX7CP15954 63 aa4.65□□□□□ -1.67
NXF3-201ENST00000395065 HIST1H4AP62805 103 aaKnown RBP4.65□□□□□ -1.67
NXF3-201ENST00000395065 UNQ9165/PRO28630Q6UXU0 137 aa4.65□□□□□ -1.67
NXF3-201ENST00000395065 Q6ZSV7 163 aa4.65□□□□□ -1.67
NXF3-201ENST00000395065 FAM223AQ8IWN6 122 aa4.65□□□□□ -1.67
NXF3-201ENST00000395065 VSIG2Q96IQ7 327 aa4.65□□□□□ -1.67
NXF3-201ENST00000395065 CITED2Q99967 270 aaPredicted RBP4.65□□□□□ -1.67
NXF3-201ENST00000395065 SIRPDQ9H106 197 aa4.65□□□□□ -1.67
NXF3-201ENST00000395065 EDA2RQ9HAV5 297 aa4.65□□□□□ -1.67
NXF3-201ENST00000395065 NDUFA12Q9UI09 145 aa4.65□□□□□ -1.67
NXF3-201ENST00000395065 CRYBG3Q68DQ2 2970 aa4.65□□□□□ -1.67
NXF3-201ENST00000395065 TRAV8-3A0A0A6YYJ7 113 aa4.64□□□□□ -1.67
NXF3-201ENST00000395065 IGHV3-16A0A0C4DH30 117 aa4.64□□□□□ -1.67
NXF3-201ENST00000395065 TINCRA0A1B0GVN0 87 aa4.64□□□□□ -1.67
NXF3-201ENST00000395065 ADARB2-AS1A8MUL3 147 aa4.64□□□□□ -1.67
NXF3-201ENST00000395065 J3KT08 172 aa4.64□□□□□ -1.67
NXF3-201ENST00000395065 J3QKU1 62 aa4.64□□□□□ -1.67
NXF3-201ENST00000395065 WIPF1O43516 503 aa4.64□□□□□ -1.67
NXF3-201ENST00000395065 RPL11P62913 178 aaKnown RBP4.64□□□□□ -1.67
NXF3-201ENST00000395065 ADORA2A-AS1P86434 159 aa4.64□□□□□ -1.67
NXF3-201ENST00000395065 BEAN1Q3B7T3 259 aa4.64□□□□□ -1.67
NXF3-201ENST00000395065 FBXL19-AS1Q494R0 122 aa4.64□□□□□ -1.67
NXF3-201ENST00000395065 PEMTQ9UBM1 199 aa4.64□□□□□ -1.67
NXF3-201ENST00000395065 LOC107984640A0A0U1RRK4 108 aa4.64□□□□□ -1.67
NXF3-201ENST00000395065 SMIM9A6NGZ8 99 aa4.64□□□□□ -1.67
NXF3-201ENST00000395065 COX7A2LO14548 114 aa4.64□□□□□ -1.67
NXF3-201ENST00000395065 LINC00527Q9UJ94 153 aa4.64□□□□□ -1.67
NXF3-201ENST00000395065 C22orf24Q9Y442 160 aa4.64□□□□□ -1.67
NXF3-201ENST00000395065 TRACP01848 142 aa4.63□□□□□ -1.67
NXF3-201ENST00000395065 FAM19A5Q7Z5A7 132 aaPredicted RBP4.63□□□□□ -1.67
NXF3-201ENST00000395065 TMEM219Q86XT9 240 aa4.63□□□□□ -1.67
NXF3-201ENST00000395065 C5orf56Q8N8D9 126 aa4.63□□□□□ -1.67
NXF3-201ENST00000395065 DAND5Q8N907 189 aa4.63□□□□□ -1.67
NXF3-201ENST00000395065 ZFP36P26651 326 aaKnown RBP4.62□□□□□ -1.67
NXF3-201ENST00000395065 ATP5J2P56134 94 aa4.62□□□□□ -1.67
NXF3-201ENST00000395065 FAM74A4Q5TZK3 123 aa4.62□□□□□ -1.67
NXF3-201ENST00000395065 FAM222AQ5U5X8 452 aa4.62□□□□□ -1.67
NXF3-201ENST00000395065 C11orf71Q6IPW1 123 aa4.62□□□□□ -1.67
NXF3-201ENST00000395065 PTPN13Q12923 2485 aa4.62□□□□□ -1.67
NXF3-201ENST00000395065 HIVEP3Q5T1R4 2406 aa4.62□□□□□ -1.67
NXF3-201ENST00000395065 CENPEQ02224 2701 aa4.62□□□□□ -1.67
NXF3-201ENST00000395065 TRAV41A0A0B4J266 112 aa4.62□□□□□ -1.67
NXF3-201ENST00000395065 TRBV12-3P01733 135 aa4.62□□□□□ -1.67
NXF3-201ENST00000395065 CD28P10747 220 aa4.62□□□□□ -1.67
NXF3-201ENST00000395065 KLRB1Q12918 225 aa4.62□□□□□ -1.67
NXF3-201ENST00000395065 DAZ2Q13117 558 aaKnown RBP4.62□□□□□ -1.67
NXF3-201ENST00000395065 DAZ4Q86SG3 579 aaKnown RBP4.62□□□□□ -1.67
NXF3-201ENST00000395065 DAZ1Q9NQZ3 744 aaKnown RBP4.62□□□□□ -1.67
NXF3-201ENST00000395065 DAZ3Q9NR90 486 aaKnown RBP4.62□□□□□ -1.67
NXF3-201ENST00000395065 CELSR2Q9HCU4 2923 aa4.61□□□□□ -1.67
NXF3-201ENST00000395065 LRRK2Q5S007 2527 aa4.61□□□□□ -1.67
NXF3-201ENST00000395065 IGHV3OR16-10A0A075B7F0 116 aa4.61□□□□□ -1.67
NXF3-201ENST00000395065 IGLV5-45A0A087WSX0 123 aa4.61□□□□□ -1.67
NXF3-201ENST00000395065 TRAV12-3A0A0B4J271 114 aa4.61□□□□□ -1.67
NXF3-201ENST00000395065 ATOX1O00244 68 aa4.61□□□□□ -1.67
NXF3-201ENST00000395065 NDUFA1O15239 70 aa4.61□□□□□ -1.67
NXF3-201ENST00000395065 RNF152Q8N8N0 203 aa4.61□□□□□ -1.67
NXF3-201ENST00000395065 DUX5Q96PT3 197 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms