RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 UNC79Q9P2D8 2635 aa11.07□□□□□ -0.64
CPSF7-202ENST00000394888 A0A0J9YXV3 536 aa11.06□□□□□ -0.64
CPSF7-202ENST00000394888 RS1O15537 224 aa11.06□□□□□ -0.64
CPSF7-202ENST00000394888 TRRAPQ9Y4A5 3859 aa11.06□□□□□ -0.64
CPSF7-202ENST00000394888 MRPS36P82909 103 aaKnown RBP11.06□□□□□ -0.64
CPSF7-202ENST00000394888 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.06□□□□□ -0.64
CPSF7-202ENST00000394888 FABP2P12104 132 aa11.06□□□□□ -0.64
CPSF7-202ENST00000394888 SMCPP49901 116 aaPredicted RBP11.06□□□□□ -0.64
CPSF7-202ENST00000394888 MRPL16Q9NX20 251 aaKnown RBP11.06□□□□□ -0.64
CPSF7-202ENST00000394888 HTN1P15515 57 aa11.05□□□□□ -0.64
CPSF7-202ENST00000394888 TSPAN13O95857 204 aa11.05□□□□□ -0.64
CPSF7-202ENST00000394888 GCN1Q92616 2671 aaKnown RBP11.05□□□□□ -0.64
CPSF7-202ENST00000394888 IGHV3-53P01767 116 aa11.05□□□□□ -0.64
CPSF7-202ENST00000394888 TENM1Q9UKZ4 2725 aa11.05□□□□□ -0.64
CPSF7-202ENST00000394888 CFC1BP0CG36 223 aa11.04□□□□□ -0.64
CPSF7-202ENST00000394888 CFC1P0CG37 223 aa11.04□□□□□ -0.64
CPSF7-202ENST00000394888 UBE2D3P61077 147 aa11.04□□□□□ -0.64
CPSF7-202ENST00000394888 UBE2D2P62837 147 aa11.04□□□□□ -0.64
CPSF7-202ENST00000394888 ZNF479Q96JC4 524 aa11.04□□□□□ -0.64
CPSF7-202ENST00000394888 J3QQQ9 107 aa11.04□□□□□ -0.64
CPSF7-202ENST00000394888 PAPPA-AS1Q5QFB9 102 aa11.04□□□□□ -0.64
CPSF7-202ENST00000394888 CITED2Q99967 270 aaPredicted RBP11.04□□□□□ -0.64
CPSF7-202ENST00000394888 CBY1Q9Y3M2 126 aa11.04□□□□□ -0.64
CPSF7-202ENST00000394888 C11orf44Q8N8P7 122 aa11.04□□□□□ -0.64
CPSF7-202ENST00000394888 A8MWV9 139 aa11.03□□□□□ -0.64
CPSF7-202ENST00000394888 WFDC2Q14508 124 aa11.03□□□□□ -0.64
CPSF7-202ENST00000394888 C16orf95Q9H693 158 aa11.03□□□□□ -0.64
CPSF7-202ENST00000394888 HELZ2Q9BYK8 2649 aaKnown RBP11.03□□□□□ -0.64
CPSF7-202ENST00000394888 H3BMG7 143 aa11.03□□□□□ -0.64
CPSF7-202ENST00000394888 LEPROTO15243 131 aa11.03□□□□□ -0.64
CPSF7-202ENST00000394888 LINC01006Q8NI28 216 aa11.03□□□□□ -0.64
CPSF7-202ENST00000394888 ACANP16112 2415 aa11.03□□□□□ -0.64
CPSF7-202ENST00000394888 KRTAP10-3P60369 221 aa11.03□□□□□ -0.64
CPSF7-202ENST00000394888 RNASE13Q5GAN3 156 aaKnown RBP11.03□□□□□ -0.64
CPSF7-202ENST00000394888 NDUFA11Q86Y39 141 aa11.03□□□□□ -0.64
CPSF7-202ENST00000394888 ZNF415Q09FC8 603 aa11.02□□□□□ -0.64
CPSF7-202ENST00000394888 TMEM170BQ5T4T1 132 aa11.02□□□□□ -0.64
CPSF7-202ENST00000394888 CCL24O00175 119 aa11.02□□□□□ -0.65
CPSF7-202ENST00000394888 WFDC10AQ9H1F0 79 aa11.01□□□□□ -0.65
CPSF7-202ENST00000394888 WNK1Q9H4A3 2382 aa11.01□□□□□ -0.65
CPSF7-202ENST00000394888 TEX48A0A1B0GUV7 120 aa11.01□□□□□ -0.65
CPSF7-202ENST00000394888 CSNK1G2-AS1Q8NCQ2 148 aa11.01□□□□□ -0.65
CPSF7-202ENST00000394888 A0A1W2PRX2 142 aa11□□□□□ -0.65
CPSF7-202ENST00000394888 XCL2Q9UBD3 114 aa11□□□□□ -0.65
CPSF7-202ENST00000394888 TRAV25A0A0B4J276 109 aa11□□□□□ -0.65
CPSF7-202ENST00000394888 NTM-AS1Q6ZSK4 140 aa11□□□□□ -0.65
CPSF7-202ENST00000394888 RNF151Q2KHN1 245 aa11□□□□□ -0.65
CPSF7-202ENST00000394888 Q6ZUT4 128 aa11□□□□□ -0.65
CPSF7-202ENST00000394888 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.99□□□□□ -0.65
CPSF7-202ENST00000394888 IGKV2-29A2NJV5 120 aaPredicted RBP10.99□□□□□ -0.65
CPSF7-202ENST00000394888 A8MZ25 164 aa10.99□□□□□ -0.65
CPSF7-202ENST00000394888 INSP01308 110 aa10.99□□□□□ -0.65
CPSF7-202ENST00000394888 CRYBA4P53673 196 aa10.99□□□□□ -0.65
CPSF7-202ENST00000394888 SBSPONQ8IVN8 264 aa10.99□□□□□ -0.65
CPSF7-202ENST00000394888 PGPEP1Q9NXJ5 209 aa10.99□□□□□ -0.65
CPSF7-202ENST00000394888 JMJD1CQ15652 2540 aa10.99□□□□□ -0.65
CPSF7-202ENST00000394888 TRAV8-3A0A0A6YYJ7 113 aa10.99□□□□□ -0.65
CPSF7-202ENST00000394888 RNASE1P07998 156 aaKnown RBP10.99□□□□□ -0.65
CPSF7-202ENST00000394888 IGHV3-64A0A075B6Q5 118 aa10.99□□□□□ -0.65
CPSF7-202ENST00000394888 IGHV3-38A0A0C4DH36 116 aa10.99□□□□□ -0.65
CPSF7-202ENST00000394888 KHDC1LQ5JSQ8 128 aa10.99□□□□□ -0.65
CPSF7-202ENST00000394888 MTURNQ8N3F0 131 aa10.99□□□□□ -0.65
CPSF7-202ENST00000394888 LINC00694P0DN24 101 aa10.98□□□□□ -0.65
CPSF7-202ENST00000394888 IGHV3-30-3P0DP02 117 aa10.98□□□□□ -0.65
CPSF7-202ENST00000394888 DYNLRB2Q8TF09 96 aa10.98□□□□□ -0.65
CPSF7-202ENST00000394888 LINC01587Q99440 93 aa10.98□□□□□ -0.65
CPSF7-202ENST00000394888 ADAMTSL4-AS1Q5T5F5 129 aa10.98□□□□□ -0.65
CPSF7-202ENST00000394888 IGLV5-45A0A087WSX0 123 aa10.98□□□□□ -0.65
CPSF7-202ENST00000394888 PCP4P48539 62 aa10.97□□□□□ -0.65
CPSF7-202ENST00000394888 TMEM263Q8WUH6 116 aaKnown RBP10.97□□□□□ -0.65
CPSF7-202ENST00000394888 SPXQ9BT56 116 aa10.97□□□□□ -0.65
CPSF7-202ENST00000394888 CCDC168Q8NDH2 2452 aa10.97□□□□□ -0.65
CPSF7-202ENST00000394888 PLA2G2AP14555 144 aa10.97□□□□□ -0.65
CPSF7-202ENST00000394888 A0A0J9YXY3 114 aa10.97□□□□□ -0.65
CPSF7-202ENST00000394888 INSL3P51460 131 aa10.97□□□□□ -0.65
CPSF7-202ENST00000394888 COX6A2Q02221 97 aa10.97□□□□□ -0.65
CPSF7-202ENST00000394888 SCGB1D4Q6XE38 83 aa10.96□□□□□ -0.65
CPSF7-202ENST00000394888 Q6ZTI0 123 aa10.96□□□□□ -0.65
CPSF7-202ENST00000394888 TINCRA0A1B0GVN0 87 aa10.96□□□□□ -0.65
CPSF7-202ENST00000394888 FAM19A3Q7Z5A8 133 aa10.96□□□□□ -0.65
CPSF7-202ENST00000394888 F8W1H4 67 aa10.96□□□□□ -0.66
CPSF7-202ENST00000394888 IGLV1-51P01701 117 aa10.96□□□□□ -0.66
CPSF7-202ENST00000394888 HERVK_113P61574 105 aa10.96□□□□□ -0.66
CPSF7-202ENST00000394888 C21orf62-AS1Q17RA5 79 aa10.96□□□□□ -0.66
CPSF7-202ENST00000394888 SH2D6Q7Z4S9 175 aa10.96□□□□□ -0.66
CPSF7-202ENST00000394888 IGHV3OR16-12A0A075B7B8 117 aa10.95□□□□□ -0.66
CPSF7-202ENST00000394888 SPATA3Q8NHX4 192 aa10.95□□□□□ -0.66
CPSF7-202ENST00000394888 DNAJC30Q96LL9 226 aa10.95□□□□□ -0.66
CPSF7-202ENST00000394888 VCX2Q9H322 139 aa10.95□□□□□ -0.66
CPSF7-202ENST00000394888 NDUFA7O95182 113 aa10.94□□□□□ -0.66
CPSF7-202ENST00000394888 VSIG2Q96IQ7 327 aa10.94□□□□□ -0.66
CPSF7-202ENST00000394888 TNFRSF18Q9Y5U5 241 aa10.94□□□□□ -0.66
CPSF7-202ENST00000394888 SETD2Q9BYW2 2564 aaPredicted RBP10.94□□□□□ -0.66
CPSF7-202ENST00000394888 SPANXA1Q9NS26 97 aa10.94□□□□□ -0.66
CPSF7-202ENST00000394888 K7ERU9 68 aa10.94□□□□□ -0.66
CPSF7-202ENST00000394888 SMR3AQ99954 134 aa10.94□□□□□ -0.66
CPSF7-202ENST00000394888 TSSC4Q9Y5U2 329 aaPredicted RBP10.93□□□□□ -0.66
CPSF7-202ENST00000394888 IGHV1-58A0A0C4DH39 117 aa10.93□□□□□ -0.66
CPSF7-202ENST00000394888 A4D1N5 150 aa10.93□□□□□ -0.66
CPSF7-202ENST00000394888 DNAH3Q8TD57 4116 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms