RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 TNFRSF18Q9Y5U5 241 aa16.65■□□□□ 0.26
RARA-202ENST00000394081 CIRBPQ14011 172 aaKnown RBP16.65■□□□□ 0.26
RARA-202ENST00000394081 UBE2D4Q9Y2X8 147 aa16.65■□□□□ 0.26
RARA-202ENST00000394081 HRNRQ86YZ3 2850 aaPredicted RBP16.64■□□□□ 0.26
RARA-202ENST00000394081 CEP295Q9C0D2 2601 aa16.64■□□□□ 0.25
RARA-202ENST00000394081 IGLV5-45A0A087WSX0 123 aa16.64■□□□□ 0.25
RARA-202ENST00000394081 ATP5G1P05496 136 aa16.64■□□□□ 0.25
RARA-202ENST00000394081 Q6ZSV7 163 aa16.64■□□□□ 0.25
RARA-202ENST00000394081 TIRAPP58753 221 aa16.63■□□□□ 0.25
RARA-202ENST00000394081 SPINK13Q1W4C9 94 aa16.63■□□□□ 0.25
RARA-202ENST00000394081 LINC00643Q86TS7 51 aa16.63■□□□□ 0.25
RARA-202ENST00000394081 CHCHD7Q9BUK0 85 aa16.63■□□□□ 0.25
RARA-202ENST00000394081 COX7A2LO14548 114 aa16.62■□□□□ 0.25
RARA-202ENST00000394081 EDN2P20800 178 aa16.62■□□□□ 0.25
RARA-202ENST00000394081 CITED2Q99967 270 aaPredicted RBP16.62■□□□□ 0.25
RARA-202ENST00000394081 SDIM1Q6ZPB5 146 aa16.62■□□□□ 0.25
RARA-202ENST00000394081 UBTD1Q9HAC8 227 aa16.62■□□□□ 0.25
RARA-202ENST00000394081 MED13LQ71F56 2210 aa16.62■□□□□ 0.25
RARA-202ENST00000394081 IGHV3OR16-10A0A075B7F0 116 aa16.61■□□□□ 0.25
RARA-202ENST00000394081 BRD3OSQ6XYD6 125 aa16.61■□□□□ 0.25
RARA-202ENST00000394081 CEMP1Q6PRD7 247 aaPredicted RBP16.61■□□□□ 0.25
RARA-202ENST00000394081 PRORYQ9H606 182 aa16.61■□□□□ 0.25
RARA-202ENST00000394081 IGKV3-20P01619 116 aa16.6■□□□□ 0.25
RARA-202ENST00000394081 NPC2P61916 151 aa16.6■□□□□ 0.25
RARA-202ENST00000394081 LY6EQ16553 131 aa16.6■□□□□ 0.25
RARA-202ENST00000394081 H3BUX3 64 aa16.59■□□□□ 0.25
RARA-202ENST00000394081 FAM236AA0A1B0GUQ0 79 aa16.59■□□□□ 0.25
RARA-202ENST00000394081 FAM236BA0A1B0GV22 79 aa16.59■□□□□ 0.25
RARA-202ENST00000394081 TRACP01848 142 aa16.58■□□□□ 0.25
RARA-202ENST00000394081 BLCAPP62952 87 aa16.58■□□□□ 0.25
RARA-202ENST00000394081 PPDPFQ9H3Y8 114 aa16.58■□□□□ 0.25
RARA-202ENST00000394081 LINC00308Q8TCZ7 52 aa16.58■□□□□ 0.24
RARA-202ENST00000394081 TLN1Q9Y490 2541 aaKnown RBP16.58■□□□□ 0.24
RARA-202ENST00000394081 A8MZ25 164 aa16.57■□□□□ 0.24
RARA-202ENST00000394081 DNAJC30Q96LL9 226 aa16.57■□□□□ 0.24
RARA-202ENST00000394081 CXCL5P42830 114 aa16.57■□□□□ 0.24
RARA-202ENST00000394081 RNASE13Q5GAN3 156 aaKnown RBP16.57■□□□□ 0.24
RARA-202ENST00000394081 USP24Q9UPU5 2620 aa16.55■□□□□ 0.24
RARA-202ENST00000394081 IGLV5-39A0A0G2JS06 123 aa16.55■□□□□ 0.24
RARA-202ENST00000394081 TMEM89A2RUT3 159 aa16.55■□□□□ 0.24
RARA-202ENST00000394081 PSMB8P28062 276 aa16.55■□□□□ 0.24
RARA-202ENST00000394081 FAM222AQ5U5X8 452 aa16.55■□□□□ 0.24
RARA-202ENST00000394081 C3orf22Q8N5N4 141 aa16.55■□□□□ 0.24
RARA-202ENST00000394081 PEMTQ9UBM1 199 aa16.55■□□□□ 0.24
RARA-202ENST00000394081 CDKN2A-AS1Q9UH64 79 aa16.55■□□□□ 0.24
RARA-202ENST00000394081 KMT2BQ9UMN6 2715 aaPredicted RBP16.55■□□□□ 0.24
RARA-202ENST00000394081 UQCRQO14949 82 aa16.54■□□□□ 0.24
RARA-202ENST00000394081 KLRB1Q12918 225 aa16.54■□□□□ 0.24
RARA-202ENST00000394081 DAND5Q8N907 189 aa16.54■□□□□ 0.24
RARA-202ENST00000394081 BEAN1Q3B7T3 259 aa16.52■□□□□ 0.24
RARA-202ENST00000394081 LINC00467Q9BRT7 94 aa16.52■□□□□ 0.24
RARA-202ENST00000394081 IGHV4-38-2P0DP08 117 aa16.52■□□□□ 0.23
RARA-202ENST00000394081 PROK1P58294 105 aa16.52■□□□□ 0.23
RARA-202ENST00000394081 HERVK_113P63121 156 aa16.52■□□□□ 0.23
RARA-202ENST00000394081 FAM19A3Q7Z5A8 133 aa16.52■□□□□ 0.23
RARA-202ENST00000394081 IGHV3-73A0A0B4J1V6 119 aa16.51■□□□□ 0.23
RARA-202ENST00000394081 A8MTW9 85 aa16.51■□□□□ 0.23
RARA-202ENST00000394081 SMCR5Q8TEV8 140 aa16.51■□□□□ 0.23
RARA-202ENST00000394081 DUX5Q96PT3 197 aa16.51■□□□□ 0.23
RARA-202ENST00000394081 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.5■□□□□ 0.23
RARA-202ENST00000394081 IGKV2-29A2NJV5 120 aaPredicted RBP16.5■□□□□ 0.23
RARA-202ENST00000394081 C5orf38Q86SI9 138 aa16.5■□□□□ 0.23
RARA-202ENST00000394081 LINC00526Q96FQ7 95 aa16.5■□□□□ 0.23
RARA-202ENST00000394081 INAFM2P0DMQ5 153 aa16.5■□□□□ 0.23
RARA-202ENST00000394081 IGF2RP11717 2491 aa16.5■□□□□ 0.23
RARA-202ENST00000394081 NDUFA7O95182 113 aa16.49■□□□□ 0.23
RARA-202ENST00000394081 DAZ2Q13117 558 aaKnown RBP16.49■□□□□ 0.23
RARA-202ENST00000394081 DAZ4Q86SG3 579 aaKnown RBP16.49■□□□□ 0.23
RARA-202ENST00000394081 DAZ3Q9NR90 486 aaKnown RBP16.49■□□□□ 0.23
RARA-202ENST00000394081 VPREB3Q9UKI3 123 aa16.49■□□□□ 0.23
RARA-202ENST00000394081 IGHV3-53P01767 116 aa16.49■□□□□ 0.23
RARA-202ENST00000394081 RBMY1A1P0DJD3 496 aaKnown RBP16.49■□□□□ 0.23
RARA-202ENST00000394081 RBMY1CP0DJD4 496 aa16.49■□□□□ 0.23
RARA-202ENST00000394081 ZNF415Q09FC8 603 aa16.49■□□□□ 0.23
RARA-202ENST00000394081 RBMY1FQ15415 496 aaKnown RBP16.49■□□□□ 0.23
RARA-202ENST00000394081 C9orf153Q5TBE3 101 aa16.49■□□□□ 0.23
RARA-202ENST00000394081 Q9H8V8 135 aa16.49■□□□□ 0.23
RARA-202ENST00000394081 SPTBN1Q01082 2364 aaKnown RBP16.48■□□□□ 0.23
RARA-202ENST00000394081 BAALC-AS2P0C853 105 aa16.47■□□□□ 0.23
RARA-202ENST00000394081 TMEM95Q3KNT9 176 aa16.46■□□□□ 0.23
RARA-202ENST00000394081 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.45■□□□□ 0.22
RARA-202ENST00000394081 PIMREGQ9BSJ6 248 aa16.45■□□□□ 0.22
RARA-202ENST00000394081 CHD6Q8TD26 2715 aa16.45■□□□□ 0.22
RARA-202ENST00000394081 PF4P02776 101 aa16.45■□□□□ 0.22
RARA-202ENST00000394081 Q6ZSN1 163 aa16.45■□□□□ 0.22
RARA-202ENST00000394081 DGAT2L7PQ6IED9 249 aa16.44■□□□□ 0.22
RARA-202ENST00000394081 DOPEY2Q9Y3R5 2298 aa16.44■□□□□ 0.22
RARA-202ENST00000394081 PTPRQQ9UMZ3 2332 aa16.44■□□□□ 0.22
RARA-202ENST00000394081 ABCA2Q9BZC7 2435 aa16.43■□□□□ 0.22
RARA-202ENST00000394081 NACAE9PAV3 2078 aa16.43■□□□□ 0.22
RARA-202ENST00000394081 IGHV3OR16-12A0A075B7B8 117 aa16.43■□□□□ 0.22
RARA-202ENST00000394081 SOSTDC1Q6X4U4 206 aa16.43■□□□□ 0.22
RARA-202ENST00000394081 IGHV4-61A0A0C4DH41 118 aa16.43■□□□□ 0.22
RARA-202ENST00000394081 LINC00242Q5T6M2 205 aa16.43■□□□□ 0.22
RARA-202ENST00000394081 Q9UF83 564 aa16.43■□□□□ 0.22
RARA-202ENST00000394081 Q8N2B8 174 aa16.42■□□□□ 0.22
RARA-202ENST00000394081 ZNF625Q96I27 306 aaPredicted RBP16.42■□□□□ 0.22
RARA-202ENST00000394081 C22orf24Q9Y442 160 aa16.42■□□□□ 0.22
RARA-202ENST00000394081 CSDC2Q9Y534 153 aaKnown RBP16.42■□□□□ 0.22
RARA-202ENST00000394081 KNCNA6PVL3 124 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms