RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.73□□□□□ -0.21
CBX1-202ENST00000393408 LITAFQ99732 161 aa13.73□□□□□ -0.21
CBX1-202ENST00000393408 ZNF415Q09FC8 603 aa13.72□□□□□ -0.21
CBX1-202ENST00000393408 CHCHD7Q9BUK0 85 aa13.72□□□□□ -0.21
CBX1-202ENST00000393408 ACACBO00763 2458 aa13.72□□□□□ -0.21
CBX1-202ENST00000393408 ZANQ9Y493 2812 aa13.72□□□□□ -0.21
CBX1-202ENST00000393408 TRAV8-3A0A0A6YYJ7 113 aa13.72□□□□□ -0.21
CBX1-202ENST00000393408 ADARB2-AS1A8MUL3 147 aa13.72□□□□□ -0.21
CBX1-202ENST00000393408 RNASE13Q5GAN3 156 aaKnown RBP13.72□□□□□ -0.21
CBX1-202ENST00000393408 IGSF10Q6WRI0 2623 aa13.72□□□□□ -0.21
CBX1-202ENST00000393408 ANKRD29Q8N6D5 301 aa13.71□□□□□ -0.21
CBX1-202ENST00000393408 CSMD2Q7Z408 3487 aa13.71□□□□□ -0.21
CBX1-202ENST00000393408 ANKRD17O75179 2603 aaKnown RBP13.71□□□□□ -0.21
CBX1-202ENST00000393408 H7C2G1 150 aa13.71□□□□□ -0.22
CBX1-202ENST00000393408 TMEM61Q8N0U2 210 aa13.71□□□□□ -0.22
CBX1-202ENST00000393408 PRRC2AP48634 2157 aaKnown RBP13.7□□□□□ -0.22
CBX1-202ENST00000393408 IGHV1-58A0A0C4DH39 117 aa13.7□□□□□ -0.22
CBX1-202ENST00000393408 SPANXA1Q9NS26 97 aa13.7□□□□□ -0.22
CBX1-202ENST00000393408 UBE2D4Q9Y2X8 147 aa13.7□□□□□ -0.22
CBX1-202ENST00000393408 USP9YO00507 2555 aaPredicted RBP13.7□□□□□ -0.22
CBX1-202ENST00000393408 TINCRA0A1B0GVN0 87 aa13.69□□□□□ -0.22
CBX1-202ENST00000393408 IGHV4-31P0DP07 118 aa13.69□□□□□ -0.22
CBX1-202ENST00000393408 M0QXV9 152 aa13.69□□□□□ -0.22
CBX1-202ENST00000393408 SLC25A20O43772 301 aa13.69□□□□□ -0.22
CBX1-202ENST00000393408 C11orf72Q8NBR9 251 aa13.69□□□□□ -0.22
CBX1-202ENST00000393408 C9JAW5 83 aa13.68□□□□□ -0.22
CBX1-202ENST00000393408 MAP6D1Q9H9H5 199 aa13.68□□□□□ -0.22
CBX1-202ENST00000393408 CR1P17927 2039 aa13.68□□□□□ -0.22
CBX1-202ENST00000393408 CREBBPQ92793 2442 aa13.68□□□□□ -0.22
CBX1-202ENST00000393408 MXRA5Q9NR99 2828 aa13.68□□□□□ -0.22
CBX1-202ENST00000393408 Q8N2B8 174 aa13.68□□□□□ -0.22
CBX1-202ENST00000393408 VSIG2Q96IQ7 327 aa13.68□□□□□ -0.22
CBX1-202ENST00000393408 PEMTQ9UBM1 199 aa13.68□□□□□ -0.22
CBX1-202ENST00000393408 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.67□□□□□ -0.22
CBX1-202ENST00000393408 IGKV2-29A2NJV5 120 aaPredicted RBP13.67□□□□□ -0.22
CBX1-202ENST00000393408 LINC00467Q9BRT7 94 aa13.67□□□□□ -0.22
CBX1-202ENST00000393408 SPANXDQ9BXN6 97 aa13.67□□□□□ -0.22
CBX1-202ENST00000393408 SPANXCQ9NY87 97 aa13.67□□□□□ -0.22
CBX1-202ENST00000393408 NDUFA12Q9UI09 145 aa13.67□□□□□ -0.22
CBX1-202ENST00000393408 IGHV3-53P01767 116 aa13.66□□□□□ -0.22
CBX1-202ENST00000393408 ADAMTSL4-AS1Q5T5F5 129 aa13.66□□□□□ -0.22
CBX1-202ENST00000393408 Q1RN00 199 aa13.66□□□□□ -0.22
CBX1-202ENST00000393408 Q6ZUT4 128 aa13.66□□□□□ -0.22
CBX1-202ENST00000393408 FBN2P35556 2912 aa13.66□□□□□ -0.22
CBX1-202ENST00000393408 CIDEAO60543 219 aa13.65□□□□□ -0.22
CBX1-202ENST00000393408 MT-ATP8P03928 68 aa13.65□□□□□ -0.22
CBX1-202ENST00000393408 XGP55808 180 aa13.65□□□□□ -0.22
CBX1-202ENST00000393408 BEAN1Q3B7T3 259 aa13.65□□□□□ -0.22
CBX1-202ENST00000393408 DNAJC30Q96LL9 226 aa13.65□□□□□ -0.22
CBX1-202ENST00000393408 LINC01587Q99440 93 aa13.65□□□□□ -0.22
CBX1-202ENST00000393408 A0A1B0GV72 72 aa13.65□□□□□ -0.22
CBX1-202ENST00000393408 SPINK8P0C7L1 97 aa13.65□□□□□ -0.22
CBX1-202ENST00000393408 C4orf3Q8WVX3 66 aa13.65□□□□□ -0.22
CBX1-202ENST00000393408 TRBV30A0A0K0K1B3 111 aa13.64□□□□□ -0.23
CBX1-202ENST00000393408 IGHV3-38A0A0C4DH36 116 aa13.64□□□□□ -0.23
CBX1-202ENST00000393408 A8MZ25 164 aa13.64□□□□□ -0.23
CBX1-202ENST00000393408 PRSS2P07478 247 aa13.64□□□□□ -0.23
CBX1-202ENST00000393408 ATXN8Q156A1 80 aa13.64□□□□□ -0.23
CBX1-202ENST00000393408 RS1O15537 224 aa13.63□□□□□ -0.23
CBX1-202ENST00000393408 MIAQ16674 131 aa13.63□□□□□ -0.23
CBX1-202ENST00000393408 TRIAP1O43715 76 aa13.63□□□□□ -0.23
CBX1-202ENST00000393408 INSP01308 110 aa13.63□□□□□ -0.23
CBX1-202ENST00000393408 DYNLRB2Q8TF09 96 aa13.63□□□□□ -0.23
CBX1-202ENST00000393408 DEFB114Q30KQ6 69 aa13.62□□□□□ -0.23
CBX1-202ENST00000393408 LINC01620Q4KN68 170 aa13.62□□□□□ -0.23
CBX1-202ENST00000393408 ZFAND6Q6FIF0 208 aa13.62□□□□□ -0.23
CBX1-202ENST00000393408 POLQO75417 2590 aa13.62□□□□□ -0.23
CBX1-202ENST00000393408 MYO18BQ8IUG5 2567 aa13.62□□□□□ -0.23
CBX1-202ENST00000393408 CKS1BP61024 79 aa13.61□□□□□ -0.23
CBX1-202ENST00000393408 LINC01600Q96MT4 127 aa13.61□□□□□ -0.23
CBX1-202ENST00000393408 GEMIN7Q9H840 131 aaKnown RBP13.61□□□□□ -0.23
CBX1-202ENST00000393408 KHDC1LQ5JSQ8 128 aa13.6□□□□□ -0.23
CBX1-202ENST00000393408 ICOSQ9Y6W8 199 aa13.59□□□□□ -0.23
CBX1-202ENST00000393408 ZFYVE26Q68DK2 2539 aa13.59□□□□□ -0.23
CBX1-202ENST00000393408 IGLV5-45A0A087WSX0 123 aa13.59□□□□□ -0.23
CBX1-202ENST00000393408 TMEM262E9PQX1 116 aa13.59□□□□□ -0.23
CBX1-202ENST00000393408 TIMM17BO60830 172 aa13.59□□□□□ -0.23
CBX1-202ENST00000393408 TIRAPP58753 221 aa13.59□□□□□ -0.23
CBX1-202ENST00000393408 RNF183Q96D59 192 aa13.59□□□□□ -0.23
CBX1-202ENST00000393408 CDKN2A-AS1Q9UH64 79 aa13.59□□□□□ -0.23
CBX1-202ENST00000393408 HIST2H2BDQ6DRA6 164 aa13.58□□□□□ -0.24
CBX1-202ENST00000393408 NPC2P61916 151 aa13.57□□□□□ -0.24
CBX1-202ENST00000393408 NTN5Q8WTR8 489 aaPredicted RBP13.57□□□□□ -0.24
CBX1-202ENST00000393408 CLUHP3Q96NS8 147 aa13.57□□□□□ -0.24
CBX1-202ENST00000393408 YAE1D1Q9NRH1 226 aa13.57□□□□□ -0.24
CBX1-202ENST00000393408 TRBV10-2A0A0K0K1G8 114 aa13.56□□□□□ -0.24
CBX1-202ENST00000393408 KRTAP10-9P60411 292 aa13.56□□□□□ -0.24
CBX1-202ENST00000393408 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.56□□□□□ -0.24
CBX1-202ENST00000393408 XCL2Q9UBD3 114 aa13.56□□□□□ -0.24
CBX1-202ENST00000393408 USP24Q9UPU5 2620 aa13.56□□□□□ -0.24
CBX1-202ENST00000393408 PRB1P04280 392 aa13.56□□□□□ -0.24
CBX1-202ENST00000393408 Q6ZSV7 163 aa13.56□□□□□ -0.24
CBX1-202ENST00000393408 TMEM101Q96IK0 257 aa13.56□□□□□ -0.24
CBX1-202ENST00000393408 NDUFA1O15239 70 aa13.55□□□□□ -0.24
CBX1-202ENST00000393408 ODF3L2Q3SX64 289 aa13.55□□□□□ -0.24
CBX1-202ENST00000393408 IFITM1P13164 125 aa13.55□□□□□ -0.24
CBX1-202ENST00000393408 IGHV3OR16-12A0A075B7B8 117 aa13.54□□□□□ -0.24
CBX1-202ENST00000393408 COX6A2Q02221 97 aa13.54□□□□□ -0.24
CBX1-202ENST00000393408 DGAT2L7PQ6IED9 249 aa13.54□□□□□ -0.24
CBX1-202ENST00000393408 IL17DQ8TAD2 202 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms