RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 RAB14P61106 215 aa5.09□□□□□ -1.59
HMGB3P1-201ENST00000393368 RBX1P62877 108 aa5.09□□□□□ -1.59
HMGB3P1-201ENST00000393368 ENHOQ6UWT2 76 aa5.09□□□□□ -1.59
HMGB3P1-201ENST00000393368 AMN1Q8IY45 258 aa5.09□□□□□ -1.59
HMGB3P1-201ENST00000393368 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P1-201ENST00000393368 BAALCQ8WXS3 180 aa5.09□□□□□ -1.59
HMGB3P1-201ENST00000393368 RNF185Q96GF1 192 aa5.09□□□□□ -1.59
HMGB3P1-201ENST00000393368 GFRA4Q9GZZ7 299 aa5.09□□□□□ -1.59
HMGB3P1-201ENST00000393368 TRAV8-3A0A0A6YYJ7 113 aa5.08□□□□□ -1.6
HMGB3P1-201ENST00000393368 NCR2O95944 276 aa5.08□□□□□ -1.6
HMGB3P1-201ENST00000393368 ANGP03950 147 aaKnown RBP5.08□□□□□ -1.6
HMGB3P1-201ENST00000393368 RPS10P46783 165 aaKnown RBP5.08□□□□□ -1.6
HMGB3P1-201ENST00000393368 KRTAP10-1P60331 282 aa5.08□□□□□ -1.6
HMGB3P1-201ENST00000393368 IQCJQ1A5X6 159 aa5.08□□□□□ -1.6
HMGB3P1-201ENST00000393368 CLLU1Q5K131 121 aa5.08□□□□□ -1.6
HMGB3P1-201ENST00000393368 Q8N814 137 aa5.08□□□□□ -1.6
HMGB3P1-201ENST00000393368 CHCHD7Q9BUK0 85 aa5.08□□□□□ -1.6
HMGB3P1-201ENST00000393368 MRPL18Q9H0U6 180 aaKnown RBP5.08□□□□□ -1.6
HMGB3P1-201ENST00000393368 SMDT1Q9H4I9 107 aa5.08□□□□□ -1.6
HMGB3P1-201ENST00000393368 NAT8BQ9UHF3 227 aa5.08□□□□□ -1.6
HMGB3P1-201ENST00000393368 IGLV4-60A0A075B6I1 120 aa5.07□□□□□ -1.6
HMGB3P1-201ENST00000393368 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P1-201ENST00000393368 IGLV5-52A0A0A0MRZ9 124 aa5.07□□□□□ -1.6
HMGB3P1-201ENST00000393368 SMIM27A0A1W2PRY6 76 aa5.07□□□□□ -1.6
HMGB3P1-201ENST00000393368 FAM231BA6NCW3 169 aa5.07□□□□□ -1.6
HMGB3P1-201ENST00000393368 SDHAF1A6NFY7 115 aa5.07□□□□□ -1.6
HMGB3P1-201ENST00000393368 CRPP02741 224 aa5.07□□□□□ -1.6
HMGB3P1-201ENST00000393368 RAB4AP20338 218 aa5.07□□□□□ -1.6
HMGB3P1-201ENST00000393368 AMTP48728 403 aa5.07□□□□□ -1.6
HMGB3P1-201ENST00000393368 CAMPP49913 170 aa5.07□□□□□ -1.6
HMGB3P1-201ENST00000393368 HAMPP81172 84 aa5.07□□□□□ -1.6
HMGB3P1-201ENST00000393368 RIGQ13278 110 aa5.07□□□□□ -1.6
HMGB3P1-201ENST00000393368 COTL1Q14019 142 aa5.07□□□□□ -1.6
HMGB3P1-201ENST00000393368 TMEM97Q5BJF2 176 aa5.07□□□□□ -1.6
HMGB3P1-201ENST00000393368 MRPL54Q6P161 138 aaKnown RBP5.07□□□□□ -1.6
HMGB3P1-201ENST00000393368 LINC00269Q8N2A0 174 aa5.07□□□□□ -1.6
HMGB3P1-201ENST00000393368 TMEM243Q9BU79 118 aa5.07□□□□□ -1.6
HMGB3P1-201ENST00000393368 TM2D2Q9BX73 214 aa5.07□□□□□ -1.6
HMGB3P1-201ENST00000393368 TMEM191AQ9H0A3 160 aa5.07□□□□□ -1.6
HMGB3P1-201ENST00000393368 FAT1Q14517 4588 aa5.07□□□□□ -1.6
HMGB3P1-201ENST00000393368 IGLV10-54A0A075B6I4 117 aa5.06□□□□□ -1.6
HMGB3P1-201ENST00000393368 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P1-201ENST00000393368 IGKV2-29A2NJV5 120 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P1-201ENST00000393368 HLA-DQA1P01909 254 aa5.06□□□□□ -1.6
HMGB3P1-201ENST00000393368 ELOBQ15370 118 aa5.06□□□□□ -1.6
HMGB3P1-201ENST00000393368 LINC01620Q4KN68 170 aa5.06□□□□□ -1.6
HMGB3P1-201ENST00000393368 C20orf203Q8NBC4 194 aa5.06□□□□□ -1.6
HMGB3P1-201ENST00000393368 C1orf43Q9BWL3 253 aa5.06□□□□□ -1.6
HMGB3P1-201ENST00000393368 KRTAP4-5Q9BYR2 181 aa5.06□□□□□ -1.6
HMGB3P1-201ENST00000393368 TMEM242Q9NWH2 141 aa5.06□□□□□ -1.6
HMGB3P1-201ENST00000393368 IGKV3OR2-268A0A0C4DH90 116 aa5.05□□□□□ -1.6
HMGB3P1-201ENST00000393368 UBE2L6O14933 153 aa5.05□□□□□ -1.6
HMGB3P1-201ENST00000393368 CDK2AP2O75956 126 aa5.05□□□□□ -1.6
HMGB3P1-201ENST00000393368 APCSP02743 223 aa5.05□□□□□ -1.6
HMGB3P1-201ENST00000393368 ADCYAP1P18509 176 aa5.05□□□□□ -1.6
HMGB3P1-201ENST00000393368 GCSHP23434 173 aa5.05□□□□□ -1.6
HMGB3P1-201ENST00000393368 REG3AQ06141 175 aa5.05□□□□□ -1.6
HMGB3P1-201ENST00000393368 MRPL51Q4U2R6 128 aaKnown RBP5.05□□□□□ -1.6
HMGB3P1-201ENST00000393368 CDPF1Q6NVV7 123 aa5.05□□□□□ -1.6
HMGB3P1-201ENST00000393368 FRZBQ92765 325 aa5.05□□□□□ -1.6
HMGB3P1-201ENST00000393368 RMI2Q96E14 147 aa5.05□□□□□ -1.6
HMGB3P1-201ENST00000393368 TMEM70Q9BUB7 260 aa5.05□□□□□ -1.6
HMGB3P1-201ENST00000393368 ST20Q9HBF5 79 aa5.05□□□□□ -1.6
HMGB3P1-201ENST00000393368 TRBV6-5A0A0K0K1A5 114 aa5.04□□□□□ -1.6
HMGB3P1-201ENST00000393368 I3L3M4 83 aa5.04□□□□□ -1.6
HMGB3P1-201ENST00000393368 TSHBP01222 138 aa5.04□□□□□ -1.6
HMGB3P1-201ENST00000393368 PMCHP20382 165 aa5.04□□□□□ -1.6
HMGB3P1-201ENST00000393368 PKIAP61925 76 aa5.04□□□□□ -1.6
HMGB3P1-201ENST00000393368 Q0VG73 95 aa5.04□□□□□ -1.6
HMGB3P1-201ENST00000393368 FAM104BQ5XKR9 115 aa5.04□□□□□ -1.6
HMGB3P1-201ENST00000393368 NRACQ8N912 160 aa5.04□□□□□ -1.6
HMGB3P1-201ENST00000393368 MRAP2Q96G30 205 aa5.04□□□□□ -1.6
HMGB3P1-201ENST00000393368 PRR34Q9NV39 138 aa5.04□□□□□ -1.6
HMGB3P1-201ENST00000393368 A0A1B0GXF2 115 aa5.03□□□□□ -1.6
HMGB3P1-201ENST00000393368 HBBP68871 147 aa5.03□□□□□ -1.6
HMGB3P1-201ENST00000393368 MIAQ16674 131 aa5.03□□□□□ -1.6
HMGB3P1-201ENST00000393368 AMMECR1LQ6DCA0 310 aa5.03□□□□□ -1.6
HMGB3P1-201ENST00000393368 RNASEKQ6P5S7 137 aaKnown RBP5.03□□□□□ -1.6
HMGB3P1-201ENST00000393368 KRTAP26-1Q6PEX3 210 aa5.03□□□□□ -1.6
HMGB3P1-201ENST00000393368 COMMD7Q86VX2 200 aa5.03□□□□□ -1.6
HMGB3P1-201ENST00000393368 NTN5Q8WTR8 489 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P1-201ENST00000393368 COX11Q9Y6N1 276 aa5.03□□□□□ -1.6
HMGB3P1-201ENST00000393368 VPS13BQ7Z7G8 4022 aa5.02□□□□□ -1.61
HMGB3P1-201ENST00000393368 A0A1B0GUV1 79 aa5.02□□□□□ -1.61
HMGB3P1-201ENST00000393368 D6R8Y8 96 aa5.02□□□□□ -1.61
HMGB3P1-201ENST00000393368 USP17L23D6RBM5 183 aa5.02□□□□□ -1.61
HMGB3P1-201ENST00000393368 F8W036 122 aa5.02□□□□□ -1.61
HMGB3P1-201ENST00000393368 FGF6P10767 208 aa5.02□□□□□ -1.61
HMGB3P1-201ENST00000393368 POLR2KP53803 58 aaKnown RBP5.02□□□□□ -1.61
HMGB3P1-201ENST00000393368 XGP55808 180 aa5.02□□□□□ -1.61
HMGB3P1-201ENST00000393368 PNRC1Q12796 327 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P1-201ENST00000393368 FAM30AQ9NZY2 134 aa5.02□□□□□ -1.61
HMGB3P1-201ENST00000393368 TRBV27A0A0K0K1C4 114 aa5.01□□□□□ -1.61
HMGB3P1-201ENST00000393368 A0A1B0GW15 77 aa5.01□□□□□ -1.61
HMGB3P1-201ENST00000393368 TMEM218A2RU14 115 aa5.01□□□□□ -1.61
HMGB3P1-201ENST00000393368 PPP1R2P9O14990 202 aa5.01□□□□□ -1.61
HMGB3P1-201ENST00000393368 NPYP01303 97 aa5.01□□□□□ -1.61
HMGB3P1-201ENST00000393368 SMR3BP02814 79 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P1-201ENST00000393368 MT-ND4LP03901 98 aa5.01□□□□□ -1.61
HMGB3P1-201ENST00000393368 ESDP10768 282 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms