RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 GCSHP23434 173 aa13.34□□□□□ -0.27
STRADB-202ENST00000392249 ZNRF2Q8NHG8 242 aa13.34□□□□□ -0.27
STRADB-202ENST00000392249 TENM1Q9UKZ4 2725 aa13.34□□□□□ -0.27
STRADB-202ENST00000392249 IGHV3-38A0A0C4DH36 116 aa13.33□□□□□ -0.28
STRADB-202ENST00000392249 PHLDA1Q8WV24 401 aaPredicted RBP13.33□□□□□ -0.28
STRADB-202ENST00000392249 ZNF479Q96JC4 524 aa13.33□□□□□ -0.28
STRADB-202ENST00000392249 IGLV4-3A0A075B6K6 122 aa13.32□□□□□ -0.28
STRADB-202ENST00000392249 K7EP13 123 aa13.32□□□□□ -0.28
STRADB-202ENST00000392249 NOP10Q9NPE3 64 aaKnown RBP13.32□□□□□ -0.28
STRADB-202ENST00000392249 MYMXA0A1B0GTQ4 84 aa13.32□□□□□ -0.28
STRADB-202ENST00000392249 TMEM170BQ5T4T1 132 aa13.32□□□□□ -0.28
STRADB-202ENST00000392249 FXYD2P54710 66 aa13.31□□□□□ -0.28
STRADB-202ENST00000392249 VAMP3Q15836 100 aa13.31□□□□□ -0.28
STRADB-202ENST00000392249 DNAJC30Q96LL9 226 aa13.31□□□□□ -0.28
STRADB-202ENST00000392249 C1QTNF4Q9BXJ3 329 aa13.31□□□□□ -0.28
STRADB-202ENST00000392249 CEMP1Q6PRD7 247 aaPredicted RBP13.31□□□□□ -0.28
STRADB-202ENST00000392249 CSNK1G2-AS1Q8NCQ2 148 aa13.31□□□□□ -0.28
STRADB-202ENST00000392249 SPATA3Q8NHX4 192 aa13.3□□□□□ -0.28
STRADB-202ENST00000392249 CHCHD7Q9BUK0 85 aa13.3□□□□□ -0.28
STRADB-202ENST00000392249 VCX2Q9H322 139 aa13.3□□□□□ -0.28
STRADB-202ENST00000392249 PLAC8L1A1L4L8 177 aa13.3□□□□□ -0.28
STRADB-202ENST00000392249 HERVK_113P61574 105 aa13.3□□□□□ -0.28
STRADB-202ENST00000392249 C16orf74Q96GX8 76 aa13.3□□□□□ -0.28
STRADB-202ENST00000392249 CCL25O15444 150 aa13.29□□□□□ -0.28
STRADB-202ENST00000392249 PTTG1IPP53801 180 aa13.29□□□□□ -0.28
STRADB-202ENST00000392249 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.28□□□□□ -0.28
STRADB-202ENST00000392249 IGKV2-29A2NJV5 120 aaPredicted RBP13.28□□□□□ -0.28
STRADB-202ENST00000392249 ZNF815PA8K554 130 aa13.28□□□□□ -0.28
STRADB-202ENST00000392249 UBE2V1Q13404 147 aa13.28□□□□□ -0.28
STRADB-202ENST00000392249 COTL1Q14019 142 aa13.28□□□□□ -0.28
STRADB-202ENST00000392249 NFE4Q86UQ8 179 aa13.28□□□□□ -0.28
STRADB-202ENST00000392249 CEND1Q8N111 149 aa13.28□□□□□ -0.28
STRADB-202ENST00000392249 FAM104AQ969W3 186 aa13.28□□□□□ -0.28
STRADB-202ENST00000392249 PYGO1Q9Y3Y4 419 aa13.28□□□□□ -0.28
STRADB-202ENST00000392249 TRAV4A0A0B4J268 109 aa13.28□□□□□ -0.28
STRADB-202ENST00000392249 DAZ2Q13117 558 aaKnown RBP13.28□□□□□ -0.28
STRADB-202ENST00000392249 RAB37Q96AX2 223 aa13.28□□□□□ -0.28
STRADB-202ENST00000392249 H3BRM9 83 aa13.27□□□□□ -0.28
STRADB-202ENST00000392249 CRLF1O75462 422 aa13.27□□□□□ -0.28
STRADB-202ENST00000392249 RRN3P1Q2M238 152 aa13.27□□□□□ -0.28
STRADB-202ENST00000392249 RNASE13Q5GAN3 156 aaKnown RBP13.27□□□□□ -0.28
STRADB-202ENST00000392249 ATRQ13535 2644 aa13.27□□□□□ -0.29
STRADB-202ENST00000392249 HIST1H4GQ99525 98 aa13.27□□□□□ -0.29
STRADB-202ENST00000392249 A0A0J9YXV3 536 aa13.26□□□□□ -0.29
STRADB-202ENST00000392249 K7EQD1 137 aa13.26□□□□□ -0.29
STRADB-202ENST00000392249 AMMECR1LQ6DCA0 310 aa13.26□□□□□ -0.29
STRADB-202ENST00000392249 TM2D2Q9BX73 214 aa13.26□□□□□ -0.29
STRADB-202ENST00000392249 GAGE12BA1L429 117 aa13.25□□□□□ -0.29
STRADB-202ENST00000392249 GAGE7O76087 117 aa13.25□□□□□ -0.29
STRADB-202ENST00000392249 GAGE12FP0CL80 117 aa13.25□□□□□ -0.29
STRADB-202ENST00000392249 GAGE12GP0CL81 117 aa13.25□□□□□ -0.29
STRADB-202ENST00000392249 GAGE12IP0CL82 117 aa13.25□□□□□ -0.29
STRADB-202ENST00000392249 FOSL1P15407 271 aa13.25□□□□□ -0.29
STRADB-202ENST00000392249 NAA38Q9BRA0 125 aaKnown RBP13.25□□□□□ -0.29
STRADB-202ENST00000392249 UBE2D4Q9Y2X8 147 aa13.25□□□□□ -0.29
STRADB-202ENST00000392249 TRBV7-3A0A075B6L6 115 aa13.25□□□□□ -0.29
STRADB-202ENST00000392249 TSPEAR-AS2P59090 65 aa13.25□□□□□ -0.29
STRADB-202ENST00000392249 SCGB1D4Q6XE38 83 aa13.25□□□□□ -0.29
STRADB-202ENST00000392249 SLC25A29Q8N8R3 303 aa13.25□□□□□ -0.29
STRADB-202ENST00000392249 PLEKHB2Q96CS7 222 aa13.25□□□□□ -0.29
STRADB-202ENST00000392249 AMELXQ99217 191 aa13.25□□□□□ -0.29
STRADB-202ENST00000392249 TRGV2A0A075B6R0 118 aa13.24□□□□□ -0.29
STRADB-202ENST00000392249 TAL2Q16559 108 aa13.24□□□□□ -0.29
STRADB-202ENST00000392249 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.24□□□□□ -0.29
STRADB-202ENST00000392249 C9orf118A6NHY6 69 aa13.24□□□□□ -0.29
STRADB-202ENST00000392249 ZNF22P17026 224 aaPredicted RBP13.24□□□□□ -0.29
STRADB-202ENST00000392249 SPANXA1Q9NS26 97 aa13.24□□□□□ -0.29
STRADB-202ENST00000392249 NHP2Q9NX24 153 aaKnown RBP13.24□□□□□ -0.29
STRADB-202ENST00000392249 TEP1Q99973 2627 aaKnown RBP13.23□□□□□ -0.29
STRADB-202ENST00000392249 H3BUT2 72 aa13.23□□□□□ -0.29
STRADB-202ENST00000392249 K7ERJ3 54 aa13.23□□□□□ -0.29
STRADB-202ENST00000392249 RPL36AP83881 106 aaKnown RBP13.23□□□□□ -0.29
STRADB-202ENST00000392249 RPL36ALQ969Q0 106 aaKnown RBP13.23□□□□□ -0.29
STRADB-202ENST00000392249 SMIM13P0DJ93 91 aa13.22□□□□□ -0.29
STRADB-202ENST00000392249 TRBV10-1A0A0K0K1A3 114 aa13.22□□□□□ -0.29
STRADB-202ENST00000392249 TMEM223A0PJW6 202 aa13.22□□□□□ -0.29
STRADB-202ENST00000392249 INSL3P51460 131 aa13.22□□□□□ -0.29
STRADB-202ENST00000392249 C9orf66Q5T8R8 295 aa13.22□□□□□ -0.29
STRADB-202ENST00000392249 IGHV3-64A0A075B6Q5 118 aa13.21□□□□□ -0.29
STRADB-202ENST00000392249 Q6ZUT4 128 aa13.21□□□□□ -0.29
STRADB-202ENST00000392249 OVOL2Q9BRP0 275 aa13.21□□□□□ -0.29
STRADB-202ENST00000392249 FLNBO75369 2602 aaKnown RBP13.21□□□□□ -0.29
STRADB-202ENST00000392249 GAGE12JA6NER3 117 aa13.21□□□□□ -0.3
STRADB-202ENST00000392249 J3QQQ9 107 aa13.21□□□□□ -0.3
STRADB-202ENST00000392249 CRYBA4P53673 196 aa13.21□□□□□ -0.3
STRADB-202ENST00000392249 GAGE4Q13068 117 aa13.21□□□□□ -0.3
STRADB-202ENST00000392249 GAGE5Q13069 117 aa13.21□□□□□ -0.3
STRADB-202ENST00000392249 GAGE13Q4V321 117 aa13.21□□□□□ -0.3
STRADB-202ENST00000392249 MRPS36P82909 103 aaKnown RBP13.2□□□□□ -0.3
STRADB-202ENST00000392249 CITED1Q99966 193 aa13.2□□□□□ -0.3
STRADB-202ENST00000392249 LGALS3P17931 250 aaKnown RBP13.19□□□□□ -0.3
STRADB-202ENST00000392249 F8P00451 2351 aa13.19□□□□□ -0.3
STRADB-202ENST00000392249 NBEAL2Q6ZNJ1 2754 aa13.18□□□□□ -0.3
STRADB-202ENST00000392249 UBE2D3P61077 147 aa13.18□□□□□ -0.3
STRADB-202ENST00000392249 UBE2D2P62837 147 aa13.18□□□□□ -0.3
STRADB-202ENST00000392249 LEPROTO15243 131 aa13.18□□□□□ -0.3
STRADB-202ENST00000392249 DAZ4Q86SG3 579 aaKnown RBP13.18□□□□□ -0.3
STRADB-202ENST00000392249 DAZ3Q9NR90 486 aaKnown RBP13.18□□□□□ -0.3
STRADB-202ENST00000392249 A0A0J9YY99 117 aa13.17□□□□□ -0.3
STRADB-202ENST00000392249 NTM-AS1Q6ZSK4 140 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms