RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 LYZL6O75951 148 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 ERC2-IT1O76042 136 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 TCRAP04437 139 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 CCKP06307 115 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 COX6B1P14854 86 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 CCL23P55773 120 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 Q1T7F1 81 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 GDF5OSQ5U4N7 250 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 LYPD5Q6UWN5 251 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 C2orf82Q6UX34 121 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 LINC00305Q7Z4B0 112 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 ADM2Q7Z4H4 148 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 WFDC5Q8TCV5 224 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 BRK1Q8WUW1 75 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 NMNAT3Q96T66 252 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 LINC00588Q9Y4M8 146 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 LHFPL6Q9Y693 200 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 U3KQK5 164 aa1.56□□□□□ -2.16
PTPRC-205ENST00000391970 MUC22E2RYF6 1773 aaPredicted RBP1.56□□□□□ -2.16
PTPRC-205ENST00000391970 DOCK11Q5JSL3 2073 aa1.55□□□□□ -2.16
PTPRC-205ENST00000391970 TEP1Q99973 2627 aaKnown RBP1.55□□□□□ -2.16
PTPRC-205ENST00000391970 IGKV1OR2-108A0A075B7D4 117 aa1.55□□□□□ -2.16
PTPRC-205ENST00000391970 IGLV3-32A0A0A0MS00 114 aa1.55□□□□□ -2.16
PTPRC-205ENST00000391970 IGHV3-43A0A0B4J1X8 118 aa1.55□□□□□ -2.16
PTPRC-205ENST00000391970 TRAV12-1A0A0B4J245 112 aa1.55□□□□□ -2.16
PTPRC-205ENST00000391970 IGKV2-24A0A0C4DH68 120 aa1.55□□□□□ -2.16
PTPRC-205ENST00000391970 TRBV6-1A0A0K0K1D8 114 aa1.55□□□□□ -2.16
PTPRC-205ENST00000391970 A6NN06 94 aa1.55□□□□□ -2.16
PTPRC-205ENST00000391970 C4orf51C9J302 202 aa1.55□□□□□ -2.16
PTPRC-205ENST00000391970 M0R378 163 aa1.55□□□□□ -2.16
PTPRC-205ENST00000391970 KISS1Q15726 138 aa1.55□□□□□ -2.16
PTPRC-205ENST00000391970 SMCR5Q8TEV8 140 aa1.55□□□□□ -2.16
PTPRC-205ENST00000391970 DCANP1Q8TF63 244 aa1.55□□□□□ -2.16
PTPRC-205ENST00000391970 DIRC1Q969H9 104 aa1.55□□□□□ -2.16
PTPRC-205ENST00000391970 FXYD5Q96DB9 178 aa1.55□□□□□ -2.16
PTPRC-205ENST00000391970 ZNF714Q96N38 554 aa1.55□□□□□ -2.16
PTPRC-205ENST00000391970 MRPL35Q9NZE8 188 aaKnown RBP1.55□□□□□ -2.16
PTPRC-205ENST00000391970 UBE2D4Q9Y2X8 147 aa1.55□□□□□ -2.16
PTPRC-205ENST00000391970 R4GN34 69 aa1.55□□□□□ -2.16
PTPRC-205ENST00000391970 MPDZO75970 2070 aa1.55□□□□□ -2.16
PTPRC-205ENST00000391970 EML6Q6ZMW3 1958 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 IGKV2D-26A0A0A0MRZ7 120 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 TRBV7-1A0A0A6YYK4 115 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 IGHV3-21A0A0B4J1V1 117 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 A0A0J9YX75 114 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 A0A1W2PNN7 141 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 H3BQ85 93 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 LST1O00453 97 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 ZNF73O43830 326 aaPredicted RBP1.54□□□□□ -2.16
PTPRC-205ENST00000391970 LTAP01374 205 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 IGLV3-1P01715 115 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 IGHV3-33P01772 117 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 HMGN2P05204 90 aaKnown RBP1.54□□□□□ -2.16
PTPRC-205ENST00000391970 HRES1P13985 223 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 LGALS3P17931 250 aaKnown RBP1.54□□□□□ -2.16
PTPRC-205ENST00000391970 PLNP26678 52 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 IFI27P40305 119 aaPredicted RBP1.54□□□□□ -2.16
PTPRC-205ENST00000391970 SNRPD3P62318 126 aaKnown RBP1.54□□□□□ -2.16
PTPRC-205ENST00000391970 ATXN8Q156A1 80 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 CENPWQ5EE01 88 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 KRTAP5-2Q701N4 177 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 LCA10Q71F78 164 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 LYZL2Q7Z4W2 148 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 WFDC11Q8NEX6 87 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 C10orf105Q8TEF2 133 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 TOMM6Q96B49 74 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 Q96M85 177 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 OBSCN-AS1Q96MR7 158 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 WFDC6Q9BQY6 131 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 NPCDR1Q9BY65 106 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 CNFNQ9BYD5 112 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 NXT2Q9NPJ8 142 aaKnown RBP1.54□□□□□ -2.16
PTPRC-205ENST00000391970 TAS2R4Q9NYW5 299 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 COL5A1P20908 1838 aaPredicted RBP1.54□□□□□ -2.16
PTPRC-205ENST00000391970 DYSFO75923 2080 aa1.54□□□□□ -2.16
PTPRC-205ENST00000391970 TRAV7A0A075B6U4 112 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 TRAV8-3A0A0A6YYJ7 113 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 TRAV41A0A0B4J266 112 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 TEX49A0A1B0GTD5 131 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 A0A1W2PQD3 144 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 A8MUN3 132 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 LOC730098B7Z3J9 87 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 H3BP45 60 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 K7EMI3 77 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 K7ERS5 55 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 TIMM17BO60830 172 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 SH2D1AO60880 128 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 TRGV3P03979 118 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 IGKV4-1P06312 121 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 P0C880 135 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 RNASE4P34096 147 aaKnown RBP1.53□□□□□ -2.16
PTPRC-205ENST00000391970 XCL1P47992 114 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 KRTAP10-1P60331 282 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 UBE2BP63146 152 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 PTPN13Q12923 2485 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 ESRGQ1W209 222 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 C7orf65Q6ZTY9 151 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 Q8IYB0 196 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 C3orf56Q8N813 242 aa1.53□□□□□ -2.16
PTPRC-205ENST00000391970 CCL4L1Q8NHW4 92 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms