RNA–Protein interactions for RNA: ENST00000390243.2

IGKV4-1-201, Transcript of immunoglobulin kappa variable 4-1, humanhuman

APPRIS P1 BASIC

Gene IGKV4-1, Length 538 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV4-1-201ENST00000390243 TMEM243Q9BU79 118 aa11.26□□□□□ -0.61
IGKV4-1-201ENST00000390243 TM2D2Q9BX73 214 aa11.26□□□□□ -0.61
IGKV4-1-201ENST00000390243 PRR34Q9NV39 138 aa11.26□□□□□ -0.61
IGKV4-1-201ENST00000390243 SMIM27A0A1W2PRY6 76 aa11.25□□□□□ -0.61
IGKV4-1-201ENST00000390243 FAM231BA6NCW3 169 aa11.25□□□□□ -0.61
IGKV4-1-201ENST00000390243 RAB4AP20338 218 aa11.25□□□□□ -0.61
IGKV4-1-201ENST00000390243 LINC00269Q8N2A0 174 aa11.25□□□□□ -0.61
IGKV4-1-201ENST00000390243 NTN5Q8WTR8 489 aaPredicted RBP11.25□□□□□ -0.61
IGKV4-1-201ENST00000390243 TMEM191AQ9H0A3 160 aa11.25□□□□□ -0.61
IGKV4-1-201ENST00000390243 FAM30AQ9NZY2 134 aa11.25□□□□□ -0.61
IGKV4-1-201ENST00000390243 SDHAF1A6NFY7 115 aa11.24□□□□□ -0.61
IGKV4-1-201ENST00000390243 AMTP48728 403 aa11.24□□□□□ -0.61
IGKV4-1-201ENST00000390243 TMEM97Q5BJF2 176 aa11.24□□□□□ -0.61
IGKV4-1-201ENST00000390243 SMDT1Q9H4I9 107 aa11.24□□□□□ -0.61
IGKV4-1-201ENST00000390243 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.23□□□□□ -0.61
IGKV4-1-201ENST00000390243 IGKV2-29A2NJV5 120 aaPredicted RBP11.23□□□□□ -0.61
IGKV4-1-201ENST00000390243 CRPP02741 224 aa11.23□□□□□ -0.61
IGKV4-1-201ENST00000390243 COTL1Q14019 142 aa11.23□□□□□ -0.61
IGKV4-1-201ENST00000390243 IGLV10-54A0A075B6I4 117 aa11.22□□□□□ -0.61
IGKV4-1-201ENST00000390243 TRBV6-5A0A0K0K1A5 114 aa11.22□□□□□ -0.61
IGKV4-1-201ENST00000390243 TSHBP01222 138 aa11.22□□□□□ -0.61
IGKV4-1-201ENST00000390243 HLA-DQA1P01909 254 aa11.22□□□□□ -0.61
IGKV4-1-201ENST00000390243 ADCYAP1P18509 176 aa11.22□□□□□ -0.61
IGKV4-1-201ENST00000390243 GCSHP23434 173 aa11.22□□□□□ -0.61
IGKV4-1-201ENST00000390243 CLLU1Q5K131 121 aa11.22□□□□□ -0.61
IGKV4-1-201ENST00000390243 KCNIP4Q6PIL6 250 aa11.22□□□□□ -0.61
IGKV4-1-201ENST00000390243 SMIM15Q7Z3B0 74 aa11.22□□□□□ -0.61
IGKV4-1-201ENST00000390243 NRACQ8N912 160 aa11.22□□□□□ -0.61
IGKV4-1-201ENST00000390243 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.22□□□□□ -0.61
IGKV4-1-201ENST00000390243 BORCS7Q96B45 105 aa11.22□□□□□ -0.61
IGKV4-1-201ENST00000390243 TMEM70Q9BUB7 260 aa11.22□□□□□ -0.61
IGKV4-1-201ENST00000390243 TMEM242Q9NWH2 141 aa11.22□□□□□ -0.61
IGKV4-1-201ENST00000390243 NAT8BQ9UHF3 227 aa11.22□□□□□ -0.61
IGKV4-1-201ENST00000390243 ELOBQ15370 118 aa11.21□□□□□ -0.61
IGKV4-1-201ENST00000390243 MRPL54Q6P161 138 aaKnown RBP11.21□□□□□ -0.61
IGKV4-1-201ENST00000390243 FRZBQ92765 325 aa11.21□□□□□ -0.61
IGKV4-1-201ENST00000390243 C1orf43Q9BWL3 253 aa11.21□□□□□ -0.61
IGKV4-1-201ENST00000390243 A0A1B0GXF2 115 aa11.2□□□□□ -0.62
IGKV4-1-201ENST00000390243 CAMPP49913 170 aa11.2□□□□□ -0.62
IGKV4-1-201ENST00000390243 REG3AQ06141 175 aa11.2□□□□□ -0.62
IGKV4-1-201ENST00000390243 Q0VG73 95 aa11.2□□□□□ -0.62
IGKV4-1-201ENST00000390243 RMI2Q96E14 147 aa11.2□□□□□ -0.62
IGKV4-1-201ENST00000390243 RIGQ13278 110 aa11.19□□□□□ -0.62
IGKV4-1-201ENST00000390243 MIAQ16674 131 aa11.19□□□□□ -0.62
IGKV4-1-201ENST00000390243 MRPL51Q4U2R6 128 aaKnown RBP11.19□□□□□ -0.62
IGKV4-1-201ENST00000390243 APCSP02743 223 aa11.18□□□□□ -0.62
IGKV4-1-201ENST00000390243 POLR2KP53803 58 aaKnown RBP11.18□□□□□ -0.62
IGKV4-1-201ENST00000390243 Q8N1X5 172 aa11.18□□□□□ -0.62
IGKV4-1-201ENST00000390243 MRAP2Q96G30 205 aa11.18□□□□□ -0.62
IGKV4-1-201ENST00000390243 A0A1B0GUV1 79 aa11.17□□□□□ -0.62
IGKV4-1-201ENST00000390243 USP17L23D6RBM5 183 aa11.17□□□□□ -0.62
IGKV4-1-201ENST00000390243 PKIAP61925 76 aa11.17□□□□□ -0.62
IGKV4-1-201ENST00000390243 FAM104BQ5XKR9 115 aa11.17□□□□□ -0.62
IGKV4-1-201ENST00000390243 COX11Q9Y6N1 276 aa11.17□□□□□ -0.62
IGKV4-1-201ENST00000390243 ESDP10768 282 aa11.16□□□□□ -0.62
IGKV4-1-201ENST00000390243 RAB14P61106 215 aa11.16□□□□□ -0.62
IGKV4-1-201ENST00000390243 ST20Q9HBF5 79 aa11.16□□□□□ -0.62
IGKV4-1-201ENST00000390243 I3L3M4 83 aa11.15□□□□□ -0.62
IGKV4-1-201ENST00000390243 UBE2L6O14933 153 aa11.15□□□□□ -0.62
IGKV4-1-201ENST00000390243 FGF6P10767 208 aa11.15□□□□□ -0.62
IGKV4-1-201ENST00000390243 Q6ZSA8 131 aa11.15□□□□□ -0.62
IGKV4-1-201ENST00000390243 IGKV3OR2-268A0A0C4DH90 116 aa11.14□□□□□ -0.63
IGKV4-1-201ENST00000390243 TRBV27A0A0K0K1C4 114 aa11.14□□□□□ -0.63
IGKV4-1-201ENST00000390243 SMR3BP02814 79 aaPredicted RBP11.14□□□□□ -0.63
IGKV4-1-201ENST00000390243 PRSS1P07477 247 aa11.14□□□□□ -0.63
IGKV4-1-201ENST00000390243 PMCHP20382 165 aa11.14□□□□□ -0.63
IGKV4-1-201ENST00000390243 NPYP01303 97 aa11.13□□□□□ -0.63
IGKV4-1-201ENST00000390243 HBBP68871 147 aa11.13□□□□□ -0.63
IGKV4-1-201ENST00000390243 SUMO2P61956 95 aaKnown RBP11.12□□□□□ -0.63
IGKV4-1-201ENST00000390243 RNASEKQ6P5S7 137 aaKnown RBP11.12□□□□□ -0.63
IGKV4-1-201ENST00000390243 VPS13BQ7Z7G8 4022 aa11.11□□□□□ -0.63
IGKV4-1-201ENST00000390243 D6R8Y8 96 aa11.11□□□□□ -0.63
IGKV4-1-201ENST00000390243 SLPIP03973 132 aa11.1□□□□□ -0.63
IGKV4-1-201ENST00000390243 PNRC1Q12796 327 aaPredicted RBP11.1□□□□□ -0.63
IGKV4-1-201ENST00000390243 C15orf56Q8N910 161 aa11.1□□□□□ -0.63
IGKV4-1-201ENST00000390243 GAGE12HA6NDE8 117 aa11.09□□□□□ -0.63
IGKV4-1-201ENST00000390243 TNFRSF6BO95407 300 aa11.09□□□□□ -0.63
IGKV4-1-201ENST00000390243 RNASE13Q5GAN3 156 aaKnown RBP11.09□□□□□ -0.63
IGKV4-1-201ENST00000390243 Q5VSD8 79 aa11.09□□□□□ -0.63
IGKV4-1-201ENST00000390243 AMMECR1LQ6DCA0 310 aa11.09□□□□□ -0.63
IGKV4-1-201ENST00000390243 TMEM218A2RU14 115 aa11.08□□□□□ -0.64
IGKV4-1-201ENST00000390243 C7orf77A4D0Y5 90 aa11.08□□□□□ -0.64
IGKV4-1-201ENST00000390243 PANO1I0J062 215 aa11.08□□□□□ -0.64
IGKV4-1-201ENST00000390243 SCXQ7RTU7 201 aa11.08□□□□□ -0.64
IGKV4-1-201ENST00000390243 COMMD7Q86VX2 200 aa11.08□□□□□ -0.64
IGKV4-1-201ENST00000390243 TRAV8-4A0A0B4J246 113 aa11.07□□□□□ -0.64
IGKV4-1-201ENST00000390243 A0A1B0GW15 77 aa11.07□□□□□ -0.64
IGKV4-1-201ENST00000390243 H7C423 109 aa11.07□□□□□ -0.64
IGKV4-1-201ENST00000390243 CKS2P33552 79 aa11.07□□□□□ -0.64
IGKV4-1-201ENST00000390243 MRPL52Q86TS9 123 aaKnown RBP11.07□□□□□ -0.64
IGKV4-1-201ENST00000390243 CHCHD10Q8WYQ3 142 aaPredicted RBP11.07□□□□□ -0.64
IGKV4-1-201ENST00000390243 FAM104AQ969W3 186 aa11.07□□□□□ -0.64
IGKV4-1-201ENST00000390243 SMIM2Q9BVW6 85 aa11.07□□□□□ -0.64
IGKV4-1-201ENST00000390243 TRBV24-1A0A075B6N3 115 aa11.06□□□□□ -0.64
IGKV4-1-201ENST00000390243 PPP1R2P9O14990 202 aa11.06□□□□□ -0.64
IGKV4-1-201ENST00000390243 RPL39P62891 51 aaKnown RBP11.06□□□□□ -0.64
IGKV4-1-201ENST00000390243 FOXI1Q12951 378 aa11.06□□□□□ -0.64
IGKV4-1-201ENST00000390243 Q6ZUT4 128 aa11.06□□□□□ -0.64
IGKV4-1-201ENST00000390243 ATP5L2Q7Z4Y8 100 aa11.06□□□□□ -0.64
IGKV4-1-201ENST00000390243 UBE2D4Q9Y2X8 147 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms