RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 SERF2P84101 59 aa3.98□□□□□ -1.77
ERCC4-202ENST00000389138 TWIST1Q15672 202 aa3.98□□□□□ -1.77
ERCC4-202ENST00000389138 ADIRFQ15847 76 aa3.98□□□□□ -1.77
ERCC4-202ENST00000389138 MIC13Q5XKP0 118 aa3.98□□□□□ -1.77
ERCC4-202ENST00000389138 DPPA3Q6W0C5 159 aa3.98□□□□□ -1.77
ERCC4-202ENST00000389138 TMEM183AQ8IXX5 376 aa3.98□□□□□ -1.77
ERCC4-202ENST00000389138 TTC9CQ8N5M4 171 aa3.98□□□□□ -1.77
ERCC4-202ENST00000389138 RNF182Q8N6D2 247 aa3.98□□□□□ -1.77
ERCC4-202ENST00000389138 MIEN1Q9BRT3 115 aa3.98□□□□□ -1.77
ERCC4-202ENST00000389138 TMEM106BQ9NUM4 274 aa3.98□□□□□ -1.77
ERCC4-202ENST00000389138 EPPK1P58107 5090 aaKnown RBP3.97□□□□□ -1.77
ERCC4-202ENST00000389138 CD7P09564 240 aa3.97□□□□□ -1.77
ERCC4-202ENST00000389138 KHDC3LQ587J8 217 aa3.97□□□□□ -1.77
ERCC4-202ENST00000389138 C10orf55Q5SWW7 151 aa3.97□□□□□ -1.77
ERCC4-202ENST00000389138 MORN3Q6PF18 240 aaPredicted RBP3.97□□□□□ -1.77
ERCC4-202ENST00000389138 GTSCR1Q86UQ5 136 aa3.97□□□□□ -1.77
ERCC4-202ENST00000389138 TVP23CQ96ET8 276 aa3.97□□□□□ -1.77
ERCC4-202ENST00000389138 ZNF714Q96N38 554 aa3.97□□□□□ -1.77
ERCC4-202ENST00000389138 MGST2Q99735 147 aa3.97□□□□□ -1.77
ERCC4-202ENST00000389138 SMIM7Q9BQ49 75 aa3.97□□□□□ -1.77
ERCC4-202ENST00000389138 SHANK2-AS3Q9BTD1 123 aa3.97□□□□□ -1.77
ERCC4-202ENST00000389138 TRAV1-1A0A0B4J248 108 aa3.97□□□□□ -1.77
ERCC4-202ENST00000389138 CTXND1A0A1B0GTU2 59 aa3.97□□□□□ -1.77
ERCC4-202ENST00000389138 INS-IGF2F8WCM5 200 aa3.97□□□□□ -1.77
ERCC4-202ENST00000389138 NDUFB3O43676 98 aa3.97□□□□□ -1.77
ERCC4-202ENST00000389138 SAA1P0DJI8 122 aaPredicted RBP3.97□□□□□ -1.77
ERCC4-202ENST00000389138 RNASE4P34096 147 aaKnown RBP3.97□□□□□ -1.77
ERCC4-202ENST00000389138 TTTY13Q9BZ97 58 aa3.97□□□□□ -1.77
ERCC4-202ENST00000389138 ZNF586Q9NXT0 402 aa3.97□□□□□ -1.77
ERCC4-202ENST00000389138 LINC00312Q9Y6C7 94 aa3.97□□□□□ -1.77
ERCC4-202ENST00000389138 E7EUB6 86 aa3.96□□□□□ -1.78
ERCC4-202ENST00000389138 C17orf112F2Z3M2 114 aa3.96□□□□□ -1.78
ERCC4-202ENST00000389138 PHOX2AO14813 284 aa3.96□□□□□ -1.78
ERCC4-202ENST00000389138 IGHV3-11P01762 117 aa3.96□□□□□ -1.78
ERCC4-202ENST00000389138 ZNF688P0C7X2 276 aa3.96□□□□□ -1.78
ERCC4-202ENST00000389138 ARL14EPLP0DKL9 152 aa3.96□□□□□ -1.78
ERCC4-202ENST00000389138 CD28P10747 220 aa3.96□□□□□ -1.78
ERCC4-202ENST00000389138 CXCL5P42830 114 aa3.96□□□□□ -1.78
ERCC4-202ENST00000389138 TMEM258P61165 79 aa3.96□□□□□ -1.78
ERCC4-202ENST00000389138 ORMDL3Q8N138 153 aa3.96□□□□□ -1.78
ERCC4-202ENST00000389138 TMEM14BQ9NUH8 114 aa3.96□□□□□ -1.78
ERCC4-202ENST00000389138 TIMM9Q9Y5J7 89 aa3.96□□□□□ -1.78
ERCC4-202ENST00000389138 C11orf94C9JXX5 98 aa3.95□□□□□ -1.78
ERCC4-202ENST00000389138 HRASP01112 189 aa3.95□□□□□ -1.78
ERCC4-202ENST00000389138 SNRPD3P62318 126 aaKnown RBP3.95□□□□□ -1.78
ERCC4-202ENST00000389138 ELOBQ15370 118 aa3.95□□□□□ -1.78
ERCC4-202ENST00000389138 FAM104BQ5XKR9 115 aa3.95□□□□□ -1.78
ERCC4-202ENST00000389138 Q6AWC8 147 aa3.95□□□□□ -1.78
ERCC4-202ENST00000389138 HEPN1Q6WQI6 88 aa3.95□□□□□ -1.78
ERCC4-202ENST00000389138 SPATA12Q7Z6I5 190 aa3.95□□□□□ -1.78
ERCC4-202ENST00000389138 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.95□□□□□ -1.78
ERCC4-202ENST00000389138 SMDT1Q9H4I9 107 aa3.95□□□□□ -1.78
ERCC4-202ENST00000389138 IGHV3-21A0A0B4J1V1 117 aa3.95□□□□□ -1.78
ERCC4-202ENST00000389138 CSN1S1P47710 185 aa3.95□□□□□ -1.78
ERCC4-202ENST00000389138 UBE2BP63146 152 aa3.95□□□□□ -1.78
ERCC4-202ENST00000389138 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
ERCC4-202ENST00000389138 RNASE13Q5GAN3 156 aaKnown RBP3.95□□□□□ -1.78
ERCC4-202ENST00000389138 OR8A1Q8NGG7 326 aa3.95□□□□□ -1.78
ERCC4-202ENST00000389138 CAMK2N2Q96S95 79 aa3.95□□□□□ -1.78
ERCC4-202ENST00000389138 SDF2L1Q9HCN8 221 aa3.95□□□□□ -1.78
ERCC4-202ENST00000389138 FKBP11Q9NYL4 201 aa3.95□□□□□ -1.78
ERCC4-202ENST00000389138 EPDR1Q9UM22 224 aa3.95□□□□□ -1.78
ERCC4-202ENST00000389138 PHLDA3Q9Y5J5 127 aa3.95□□□□□ -1.78
ERCC4-202ENST00000389138 IGKV1OR2-108A0A075B7D4 117 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 TRBV27A0A0K0K1C4 114 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 OOSP1A8MZH6 123 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 IFITM1P13164 125 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 NPPCP23582 126 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 PRCDQ00LT1 54 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 ZNF833PQ6ZTB9 187 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 MIR17HGQ75NE6 70 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 TEN1Q86WV5 123 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 SCRT2Q9NQ03 307 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 A0A096LNT2 108 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 OR2T8A6NH00 312 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 IGHV1-8P0DP01 117 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 CD24P25063 80 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 GFI1BQ5VTD9 330 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 HCP5Q6MZN7 132 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 MRPL54Q6P161 138 aaKnown RBP3.94□□□□□ -1.78
ERCC4-202ENST00000389138 ATOH7Q8N100 152 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 C3orf56Q8N813 242 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 LINC01006Q8NI28 216 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 LINC00574Q9H8X3 128 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 NPVFQ9HCQ7 196 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 MANBALQ9NQG1 85 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 C21orf62Q9NYP8 219 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 LINC00588Q9Y4M8 146 aa3.94□□□□□ -1.78
ERCC4-202ENST00000389138 A0A087WWC5 75 aa3.93□□□□□ -1.78
ERCC4-202ENST00000389138 MUC21A0A0G2JKD1 596 aa3.93□□□□□ -1.78
ERCC4-202ENST00000389138 LEPROTO15243 131 aa3.93□□□□□ -1.78
ERCC4-202ENST00000389138 TRGC1P0CF51 173 aa3.93□□□□□ -1.78
ERCC4-202ENST00000389138 PYYP10082 97 aa3.93□□□□□ -1.78
ERCC4-202ENST00000389138 PRB4P10163 310 aaPredicted RBP3.93□□□□□ -1.78
ERCC4-202ENST00000389138 HLA-DRB4P13762 266 aa3.93□□□□□ -1.78
ERCC4-202ENST00000389138 SRP14P37108 136 aaKnown RBP3.93□□□□□ -1.78
ERCC4-202ENST00000389138 WT1-ASQ06250 92 aa3.93□□□□□ -1.78
ERCC4-202ENST00000389138 TMEM155Q4W5P6 130 aa3.93□□□□□ -1.78
ERCC4-202ENST00000389138 CYP2G1PQ6ZSU1 146 aa3.93□□□□□ -1.78
ERCC4-202ENST00000389138 NABP2Q9BQ15 211 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms