RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 FAM222AQ5U5X8 452 aa11.72□□□□□ -0.53
ALK-201ENST00000389048 CCDC140Q96MF4 163 aa11.72□□□□□ -0.53
ALK-201ENST00000389048 CCDC179H3BU77 68 aa11.72□□□□□ -0.53
ALK-201ENST00000389048 UQCRQO14949 82 aa11.72□□□□□ -0.53
ALK-201ENST00000389048 WFDC13Q8IUB5 93 aa11.72□□□□□ -0.53
ALK-201ENST00000389048 KRTAP27-1Q3LI81 207 aa11.71□□□□□ -0.53
ALK-201ENST00000389048 CDKN2A-AS1Q9UH64 79 aa11.71□□□□□ -0.53
ALK-201ENST00000389048 MAPKAPK5-AS1Q8N8E1 139 aa11.71□□□□□ -0.54
ALK-201ENST00000389048 PLCE1Q9P212 2302 aa11.71□□□□□ -0.54
ALK-201ENST00000389048 PIP4P1Q86T03 277 aa11.7□□□□□ -0.54
ALK-201ENST00000389048 ZFAND3Q9H8U3 227 aa11.7□□□□□ -0.54
ALK-201ENST00000389048 FAM30AQ9NZY2 134 aa11.7□□□□□ -0.54
ALK-201ENST00000389048 C19orf71A6NCJ1 209 aa11.7□□□□□ -0.54
ALK-201ENST00000389048 GVINP1Q7Z2Y8 2422 aa11.7□□□□□ -0.54
ALK-201ENST00000389048 MYCNOSP40205 109 aa11.69□□□□□ -0.54
ALK-201ENST00000389048 PRM2P04554 102 aa11.69□□□□□ -0.54
ALK-201ENST00000389048 MSMPQ1L6U9 139 aa11.69□□□□□ -0.54
ALK-201ENST00000389048 TRIAP1O43715 76 aa11.69□□□□□ -0.54
ALK-201ENST00000389048 RPL37AP8A6NKH3 93 aa11.68□□□□□ -0.54
ALK-201ENST00000389048 MGAMO43451 1857 aa11.68□□□□□ -0.54
ALK-201ENST00000389048 K7EMT4 169 aa11.68□□□□□ -0.54
ALK-201ENST00000389048 NEXN-AS1Q8NBZ9 246 aa11.67□□□□□ -0.54
ALK-201ENST00000389048 C10orf99Q6UWK7 81 aa11.67□□□□□ -0.54
ALK-201ENST00000389048 MED14OSP0DP75 135 aa11.66□□□□□ -0.54
ALK-201ENST00000389048 IGLV9-49A0A0B4J1Y8 123 aa11.66□□□□□ -0.54
ALK-201ENST00000389048 UFSP1Q6NVU6 142 aa11.66□□□□□ -0.54
ALK-201ENST00000389048 Q8N976 141 aa11.66□□□□□ -0.54
ALK-201ENST00000389048 ZGRF1Q86YA3 2104 aa11.66□□□□□ -0.54
ALK-201ENST00000389048 DENND4CQ5VZ89 1909 aa11.66□□□□□ -0.54
ALK-201ENST00000389048 TMEM223A0PJW6 202 aa11.66□□□□□ -0.54
ALK-201ENST00000389048 NOTCH3Q9UM47 2321 aa11.66□□□□□ -0.54
ALK-201ENST00000389048 DEFB131BA0A096LNP1 70 aa11.65□□□□□ -0.54
ALK-201ENST00000389048 A6NED7 52 aa11.65□□□□□ -0.54
ALK-201ENST00000389048 MRPS12O15235 138 aaKnown RBP11.65□□□□□ -0.54
ALK-201ENST00000389048 MED13Q9UHV7 2174 aa11.65□□□□□ -0.54
ALK-201ENST00000389048 CCKP06307 115 aa11.65□□□□□ -0.54
ALK-201ENST00000389048 DENND4AQ7Z401 1863 aa11.65□□□□□ -0.55
ALK-201ENST00000389048 A6NDX4 124 aa11.65□□□□□ -0.55
ALK-201ENST00000389048 IGLV1-47P01700 117 aa11.65□□□□□ -0.55
ALK-201ENST00000389048 C1orf229Q6ZS94 237 aaPredicted RBP11.65□□□□□ -0.55
ALK-201ENST00000389048 PCNX2A6NKB5 2137 aa11.64□□□□□ -0.55
ALK-201ENST00000389048 KIF26AQ9ULI4 1882 aaPredicted RBP11.64□□□□□ -0.55
ALK-201ENST00000389048 IGLV2-8P01709 118 aa11.64□□□□□ -0.55
ALK-201ENST00000389048 RETNLBQ9BQ08 111 aa11.64□□□□□ -0.55
ALK-201ENST00000389048 LOC100131303A0A0U1RQF7 123 aa11.64□□□□□ -0.55
ALK-201ENST00000389048 K7ERS5 55 aa11.63□□□□□ -0.55
ALK-201ENST00000389048 C6orf99Q4VX62 202 aa11.63□□□□□ -0.55
ALK-201ENST00000389048 CLUHP3Q96NS8 147 aa11.63□□□□□ -0.55
ALK-201ENST00000389048 TIMM17BO60830 172 aa11.63□□□□□ -0.55
ALK-201ENST00000389048 IGLV4-3A0A075B6K6 122 aa11.63□□□□□ -0.55
ALK-201ENST00000389048 C1orf195Q5TG92 126 aa11.63□□□□□ -0.55
ALK-201ENST00000389048 LINC00308Q8TCZ7 52 aa11.63□□□□□ -0.55
ALK-201ENST00000389048 LINC00694P0DN24 101 aa11.62□□□□□ -0.55
ALK-201ENST00000389048 ZNF22P17026 224 aaPredicted RBP11.62□□□□□ -0.55
ALK-201ENST00000389048 CNOT1A5YKK6 2376 aaKnown RBP11.62□□□□□ -0.55
ALK-201ENST00000389048 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.62□□□□□ -0.55
ALK-201ENST00000389048 C19orf84I3L1E1 186 aa11.62□□□□□ -0.55
ALK-201ENST00000389048 INAFM1C9JVW0 142 aa11.61□□□□□ -0.55
ALK-201ENST00000389048 NANOS2P60321 138 aaKnown RBP11.61□□□□□ -0.55
ALK-201ENST00000389048 WFDC10AQ9H1F0 79 aa11.61□□□□□ -0.55
ALK-201ENST00000389048 ANAPC1Q9H1A4 1944 aa11.61□□□□□ -0.55
ALK-201ENST00000389048 ADAMTS9Q9P2N4 1935 aa11.61□□□□□ -0.55
ALK-201ENST00000389048 A0A1B0GXF2 115 aa11.61□□□□□ -0.55
ALK-201ENST00000389048 A0A1W2PNU3 283 aaPredicted RBP11.61□□□□□ -0.55
ALK-201ENST00000389048 NDUFA7O95182 113 aa11.61□□□□□ -0.55
ALK-201ENST00000389048 RBX1P62877 108 aa11.61□□□□□ -0.55
ALK-201ENST00000389048 C9orf85Q96MD7 179 aa11.6□□□□□ -0.55
ALK-201ENST00000389048 ZNF106Q9H2Y7 1883 aaKnown RBP11.6□□□□□ -0.55
ALK-201ENST00000389048 M0QXV9 152 aa11.6□□□□□ -0.55
ALK-201ENST00000389048 PDE6GP18545 87 aa11.6□□□□□ -0.55
ALK-201ENST00000389048 CFAP126Q5VTH2 177 aa11.6□□□□□ -0.55
ALK-201ENST00000389048 BBC3Q96PG8 261 aaPredicted RBP11.6□□□□□ -0.55
ALK-201ENST00000389048 TANC2Q9HCD6 1990 aa11.59□□□□□ -0.55
ALK-201ENST00000389048 TRBV6-5A0A0K0K1A5 114 aa11.59□□□□□ -0.55
ALK-201ENST00000389048 IGFL2Q6UWQ7 119 aa11.59□□□□□ -0.55
ALK-201ENST00000389048 MALRD1Q5VYJ5 2156 aa11.58□□□□□ -0.56
ALK-201ENST00000389048 CRIP1P50238 77 aa11.58□□□□□ -0.56
ALK-201ENST00000389048 UBE2D1P51668 147 aa11.58□□□□□ -0.56
ALK-201ENST00000389048 C18orf65Q6ZTR6 163 aa11.58□□□□□ -0.56
ALK-201ENST00000389048 UBE2D4Q9Y2X8 147 aa11.58□□□□□ -0.56
ALK-201ENST00000389048 INSL3P51460 131 aa11.58□□□□□ -0.56
ALK-201ENST00000389048 TRBV27A0A0K0K1C4 114 aa11.57□□□□□ -0.56
ALK-201ENST00000389048 PRR15LQ9BU68 103 aa11.57□□□□□ -0.56
ALK-201ENST00000389048 CELA1Q9UNI1 258 aa11.57□□□□□ -0.56
ALK-201ENST00000389048 C14orf177Q52M58 125 aa11.56□□□□□ -0.56
ALK-201ENST00000389048 ACACAQ13085 2346 aa11.56□□□□□ -0.56
ALK-201ENST00000389048 LY6LH3BQJ8 138 aa11.56□□□□□ -0.56
ALK-201ENST00000389048 SOSTDC1Q6X4U4 206 aa11.56□□□□□ -0.56
ALK-201ENST00000389048 SHANK1Q9Y566 2161 aa11.55□□□□□ -0.56
ALK-201ENST00000389048 DEFB114Q30KQ6 69 aa11.55□□□□□ -0.56
ALK-201ENST00000389048 TRBV6-8A0A0A6YYG3 113 aa11.55□□□□□ -0.56
ALK-201ENST00000389048 MBD6Q96DN6 1003 aa11.55□□□□□ -0.56
ALK-201ENST00000389048 C11orf1Q9H5F2 150 aa11.55□□□□□ -0.56
ALK-201ENST00000389048 HILS1P60008 231 aa11.54□□□□□ -0.56
ALK-201ENST00000389048 RNF185Q96GF1 192 aa11.54□□□□□ -0.56
ALK-201ENST00000389048 Q6ZQY7 126 aa11.54□□□□□ -0.56
ALK-201ENST00000389048 BRWD1-AS2P59051 145 aa11.54□□□□□ -0.56
ALK-201ENST00000389048 UBE2D3P61077 147 aa11.54□□□□□ -0.56
ALK-201ENST00000389048 Q6ZPA2 131 aa11.53□□□□□ -0.56
ALK-201ENST00000389048 NOTCH4Q99466 2003 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms