RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 HERV-K104P63124 156 aa12.92□□□□□ -0.34
SGCB-201ENST00000381431 C11orf71Q6IPW1 123 aa12.92□□□□□ -0.34
SGCB-201ENST00000381431 Q9HAA7 133 aa12.91□□□□□ -0.34
SGCB-201ENST00000381431 F8WEM9 126 aa12.91□□□□□ -0.34
SGCB-201ENST00000381431 K7EQG2 157 aa12.91□□□□□ -0.34
SGCB-201ENST00000381431 Q6ZUT4 128 aa12.91□□□□□ -0.34
SGCB-201ENST00000381431 RNF185Q96GF1 192 aa12.91□□□□□ -0.34
SGCB-201ENST00000381431 C11orf21Q9P2W6 132 aa12.91□□□□□ -0.34
SGCB-201ENST00000381431 MAPKAPK5-AS1Q8N8E1 139 aa12.91□□□□□ -0.34
SGCB-201ENST00000381431 MAP6D1Q9H9H5 199 aa12.9□□□□□ -0.34
SGCB-201ENST00000381431 TMEM89A2RUT3 159 aa12.9□□□□□ -0.34
SGCB-201ENST00000381431 CLEC2BQ92478 149 aa12.9□□□□□ -0.34
SGCB-201ENST00000381431 IGKV2D-24A0A075B6R9 120 aa12.89□□□□□ -0.35
SGCB-201ENST00000381431 DEFB135Q30KP9 77 aa12.89□□□□□ -0.35
SGCB-201ENST00000381431 IGHV1-58A0A0C4DH39 117 aa12.89□□□□□ -0.35
SGCB-201ENST00000381431 IGHV4-4A0A075B6R2 117 aa12.88□□□□□ -0.35
SGCB-201ENST00000381431 FOXI1Q12951 378 aa12.88□□□□□ -0.35
SGCB-201ENST00000381431 Q6ZTI0 123 aa12.88□□□□□ -0.35
SGCB-201ENST00000381431 HHLA3Q9XRX5 114 aa12.88□□□□□ -0.35
SGCB-201ENST00000381431 B5MCH6 92 aa12.88□□□□□ -0.35
SGCB-201ENST00000381431 Q6ZS46 218 aa12.88□□□□□ -0.35
SGCB-201ENST00000381431 NDUFA11Q86Y39 141 aa12.88□□□□□ -0.35
SGCB-201ENST00000381431 MRAPQ8TCY5 172 aa12.87□□□□□ -0.35
SGCB-201ENST00000381431 COX7B2Q8TF08 81 aa12.87□□□□□ -0.35
SGCB-201ENST00000381431 Q8N6K4 173 aa12.86□□□□□ -0.35
SGCB-201ENST00000381431 NEXN-AS1Q8NBZ9 246 aa12.86□□□□□ -0.35
SGCB-201ENST00000381431 CHD7Q9P2D1 2997 aa12.86□□□□□ -0.35
SGCB-201ENST00000381431 ATP5G1P05496 136 aa12.86□□□□□ -0.35
SGCB-201ENST00000381431 PRR9Q5T870 116 aa12.86□□□□□ -0.35
SGCB-201ENST00000381431 MIR7-3HGQ8N6C7 128 aa12.86□□□□□ -0.35
SGCB-201ENST00000381431 DSCR8Q96T75 97 aa12.86□□□□□ -0.35
SGCB-201ENST00000381431 C4orf3Q8WVX3 66 aa12.85□□□□□ -0.35
SGCB-201ENST00000381431 TNRC6BQ9UPQ9 1833 aaKnown RBP12.85□□□□□ -0.35
SGCB-201ENST00000381431 IGHV3-30P01768 117 aa12.85□□□□□ -0.35
SGCB-201ENST00000381431 IGHV3-33P01772 117 aa12.85□□□□□ -0.35
SGCB-201ENST00000381431 IGHV3-30-5P0DP03 117 aa12.85□□□□□ -0.35
SGCB-201ENST00000381431 COX7A2LO14548 114 aa12.85□□□□□ -0.35
SGCB-201ENST00000381431 TMEM126AQ9H061 195 aa12.85□□□□□ -0.35
SGCB-201ENST00000381431 CDKN2A-AS1Q9UH64 79 aa12.85□□□□□ -0.35
SGCB-201ENST00000381431 PROK1P58294 105 aa12.84□□□□□ -0.35
SGCB-201ENST00000381431 MRPL23Q16540 153 aaKnown RBP12.84□□□□□ -0.35
SGCB-201ENST00000381431 DNAJC9-AS1A6NH13 148 aa12.84□□□□□ -0.35
SGCB-201ENST00000381431 SPART-AS1P0CW21 52 aa12.84□□□□□ -0.35
SGCB-201ENST00000381431 VCANP13611 3396 aa12.84□□□□□ -0.35
SGCB-201ENST00000381431 G3V4G9 280 aa12.84□□□□□ -0.35
SGCB-201ENST00000381431 ORMDL1Q9P0S3 153 aa12.84□□□□□ -0.35
SGCB-201ENST00000381431 WFDC11Q8NEX6 87 aa12.83□□□□□ -0.35
SGCB-201ENST00000381431 PRUNE2Q8WUY3 3088 aa12.83□□□□□ -0.36
SGCB-201ENST00000381431 C9orf66Q5T8R8 295 aa12.83□□□□□ -0.36
SGCB-201ENST00000381431 TCL1BO95988 128 aa12.83□□□□□ -0.36
SGCB-201ENST00000381431 TMEM263Q8WUH6 116 aaKnown RBP12.83□□□□□ -0.36
SGCB-201ENST00000381431 PRM2P04554 102 aa12.82□□□□□ -0.36
SGCB-201ENST00000381431 RPL32P62910 135 aaKnown RBP12.82□□□□□ -0.36
SGCB-201ENST00000381431 PRORYQ9H606 182 aa12.82□□□□□ -0.36
SGCB-201ENST00000381431 U3KQK5 164 aa12.82□□□□□ -0.36
SGCB-201ENST00000381431 A0A0J9YXY3 114 aa12.82□□□□□ -0.36
SGCB-201ENST00000381431 LGALS9O00182 355 aa12.82□□□□□ -0.36
SGCB-201ENST00000381431 TM2D2Q9BX73 214 aa12.82□□□□□ -0.36
SGCB-201ENST00000381431 LECT2O14960 151 aa12.82□□□□□ -0.36
SGCB-201ENST00000381431 C1orf43Q9BWL3 253 aa12.82□□□□□ -0.36
SGCB-201ENST00000381431 LINC00467Q9BRT7 94 aa12.82□□□□□ -0.36
SGCB-201ENST00000381431 RNASE3P12724 160 aaKnown RBP12.81□□□□□ -0.36
SGCB-201ENST00000381431 NFE4Q86UQ8 179 aa12.81□□□□□ -0.36
SGCB-201ENST00000381431 CAMK2N2Q96S95 79 aa12.81□□□□□ -0.36
SGCB-201ENST00000381431 M0QY20 66 aa12.81□□□□□ -0.36
SGCB-201ENST00000381431 DEFB114Q30KQ6 69 aa12.81□□□□□ -0.36
SGCB-201ENST00000381431 C2orf91Q6ZV80 131 aa12.81□□□□□ -0.36
SGCB-201ENST00000381431 URB1-AS1Q96HZ7 61 aa12.81□□□□□ -0.36
SGCB-201ENST00000381431 ZNF22P17026 224 aaPredicted RBP12.8□□□□□ -0.36
SGCB-201ENST00000381431 DEFB105AQ8NG35 78 aa12.8□□□□□ -0.36
SGCB-201ENST00000381431 KLK12Q9UKR0 248 aa12.8□□□□□ -0.36
SGCB-201ENST00000381431 TRBV10-1A0A0K0K1A3 114 aa12.8□□□□□ -0.36
SGCB-201ENST00000381431 NRACQ8N912 160 aa12.8□□□□□ -0.36
SGCB-201ENST00000381431 IGLV4-3A0A075B6K6 122 aa12.8□□□□□ -0.36
SGCB-201ENST00000381431 IGKV3D-7A0A0C4DH55 119 aa12.8□□□□□ -0.36
SGCB-201ENST00000381431 H0YGX0 51 aa12.8□□□□□ -0.36
SGCB-201ENST00000381431 TRBV10-2A0A0K0K1G8 114 aa12.79□□□□□ -0.36
SGCB-201ENST00000381431 IGHV4-31P0DP07 118 aa12.79□□□□□ -0.36
SGCB-201ENST00000381431 Q6YL49 198 aa12.79□□□□□ -0.36
SGCB-201ENST00000381431 CLPSL1A2RUU4 121 aa12.78□□□□□ -0.36
SGCB-201ENST00000381431 CFAP54Q96N23 3096 aa12.77□□□□□ -0.36
SGCB-201ENST00000381431 Q8N976 141 aa12.77□□□□□ -0.37
SGCB-201ENST00000381431 ODF3Q96PU9 254 aa12.77□□□□□ -0.37
SGCB-201ENST00000381431 TRAV26-1A0A087WT03 109 aa12.76□□□□□ -0.37
SGCB-201ENST00000381431 A8MZ25 164 aa12.76□□□□□ -0.37
SGCB-201ENST00000381431 PRO0255Q9UI72 69 aa12.76□□□□□ -0.37
SGCB-201ENST00000381431 A0A1W2PPR1 153 aa12.76□□□□□ -0.37
SGCB-201ENST00000381431 MIAQ16674 131 aa12.76□□□□□ -0.37
SGCB-201ENST00000381431 CPAMD8Q8IZJ3 1885 aa12.76□□□□□ -0.37
SGCB-201ENST00000381431 FLNBO75369 2602 aaKnown RBP12.76□□□□□ -0.37
SGCB-201ENST00000381431 AVPP01185 164 aa12.75□□□□□ -0.37
SGCB-201ENST00000381431 PSMB8P28062 276 aa12.75□□□□□ -0.37
SGCB-201ENST00000381431 SS18L2Q9UHA2 77 aa12.75□□□□□ -0.37
SGCB-201ENST00000381431 H3BT86 120 aa12.75□□□□□ -0.37
SGCB-201ENST00000381431 SPAG11BQ08648 103 aa12.75□□□□□ -0.37
SGCB-201ENST00000381431 Q6ZSV7 163 aa12.75□□□□□ -0.37
SGCB-201ENST00000381431 MRPS12O15235 138 aaKnown RBP12.74□□□□□ -0.37
SGCB-201ENST00000381431 TRBV27A0A0K0K1C4 114 aa12.74□□□□□ -0.37
SGCB-201ENST00000381431 FAM236AA0A1B0GUQ0 79 aa12.74□□□□□ -0.37
SGCB-201ENST00000381431 FAM236BA0A1B0GV22 79 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms