RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 TSSC4Q9Y5U2 329 aaPredicted RBP14.39□□□□□ -0.11
FOXC1-201ENST00000380874 RPL35AP18077 110 aaKnown RBP14.39□□□□□ -0.11
FOXC1-201ENST00000380874 F8W1H4 67 aa14.38□□□□□ -0.11
FOXC1-201ENST00000380874 IGLV4-69A0A075B6H9 119 aa14.38□□□□□ -0.11
FOXC1-201ENST00000380874 NXPH4O95158 308 aa14.38□□□□□ -0.11
FOXC1-201ENST00000380874 G3V4G9 280 aa14.37□□□□□ -0.11
FOXC1-201ENST00000380874 TRAV8-3A0A0A6YYJ7 113 aa14.37□□□□□ -0.11
FOXC1-201ENST00000380874 ZNF625Q96I27 306 aaPredicted RBP14.37□□□□□ -0.11
FOXC1-201ENST00000380874 MAP6D1Q9H9H5 199 aa14.37□□□□□ -0.11
FOXC1-201ENST00000380874 SPINK8P0C7L1 97 aa14.37□□□□□ -0.11
FOXC1-201ENST00000380874 ITPR3Q14573 2671 aa14.37□□□□□ -0.11
FOXC1-201ENST00000380874 A0A0J9YY99 117 aa14.36□□□□□ -0.11
FOXC1-201ENST00000380874 ERG28Q9UKR5 140 aa14.36□□□□□ -0.11
FOXC1-201ENST00000380874 TRGV2A0A075B6R0 118 aa14.36□□□□□ -0.11
FOXC1-201ENST00000380874 TSPEAR-AS2P59090 65 aa14.36□□□□□ -0.11
FOXC1-201ENST00000380874 NSUN5P1Q3KNT7 163 aa14.36□□□□□ -0.11
FOXC1-201ENST00000380874 TEX15Q9BXT5 2789 aa14.36□□□□□ -0.11
FOXC1-201ENST00000380874 A4D1N5 150 aa14.35□□□□□ -0.11
FOXC1-201ENST00000380874 WFDC11Q8NEX6 87 aa14.35□□□□□ -0.11
FOXC1-201ENST00000380874 TRBV6-5A0A0K0K1A5 114 aa14.35□□□□□ -0.11
FOXC1-201ENST00000380874 TRAV13-1A0A0B4J241 112 aa14.35□□□□□ -0.11
FOXC1-201ENST00000380874 RBMY1A1P0DJD3 496 aaKnown RBP14.35□□□□□ -0.11
FOXC1-201ENST00000380874 RBMY1CP0DJD4 496 aa14.35□□□□□ -0.11
FOXC1-201ENST00000380874 RBMY1FQ15415 496 aaKnown RBP14.35□□□□□ -0.11
FOXC1-201ENST00000380874 PRO1854Q9UHT4 67 aa14.34□□□□□ -0.11
FOXC1-201ENST00000380874 IGLV4-3A0A075B6K6 122 aa14.34□□□□□ -0.11
FOXC1-201ENST00000380874 AZU1P20160 251 aa14.34□□□□□ -0.11
FOXC1-201ENST00000380874 RHODO00212 210 aa14.34□□□□□ -0.11
FOXC1-201ENST00000380874 TSPAN13O95857 204 aa14.33□□□□□ -0.12
FOXC1-201ENST00000380874 MORN3Q6PF18 240 aaPredicted RBP14.33□□□□□ -0.12
FOXC1-201ENST00000380874 GAGE12JA6NER3 117 aa14.33□□□□□ -0.12
FOXC1-201ENST00000380874 GAGE4Q13068 117 aa14.33□□□□□ -0.12
FOXC1-201ENST00000380874 GAGE5Q13069 117 aa14.33□□□□□ -0.12
FOXC1-201ENST00000380874 MUSTN1Q8IVN3 82 aa14.33□□□□□ -0.12
FOXC1-201ENST00000380874 PTH2Q96A98 100 aa14.33□□□□□ -0.12
FOXC1-201ENST00000380874 NDUFA12Q9UI09 145 aa14.33□□□□□ -0.12
FOXC1-201ENST00000380874 ZNF580Q9UK33 172 aa14.33□□□□□ -0.12
FOXC1-201ENST00000380874 FLNAP21333 2647 aaKnown RBP14.32□□□□□ -0.12
FOXC1-201ENST00000380874 LEPROTO15243 131 aa14.32□□□□□ -0.12
FOXC1-201ENST00000380874 GCN1Q92616 2671 aaKnown RBP14.32□□□□□ -0.12
FOXC1-201ENST00000380874 CCL24O00175 119 aa14.32□□□□□ -0.12
FOXC1-201ENST00000380874 UBE2L6O14933 153 aa14.32□□□□□ -0.12
FOXC1-201ENST00000380874 ZNF22P17026 224 aaPredicted RBP14.32□□□□□ -0.12
FOXC1-201ENST00000380874 RPL32P62910 135 aaKnown RBP14.32□□□□□ -0.12
FOXC1-201ENST00000380874 Q9UF83 564 aa14.32□□□□□ -0.12
FOXC1-201ENST00000380874 DEFB114Q30KQ6 69 aa14.31□□□□□ -0.12
FOXC1-201ENST00000380874 MEIG1Q5JSS6 88 aa14.31□□□□□ -0.12
FOXC1-201ENST00000380874 C4orf3Q8WVX3 66 aa14.31□□□□□ -0.12
FOXC1-201ENST00000380874 A8MZ25 164 aa14.31□□□□□ -0.12
FOXC1-201ENST00000380874 NDUFA11Q86Y39 141 aa14.31□□□□□ -0.12
FOXC1-201ENST00000380874 Q6ZSV7 163 aa14.3□□□□□ -0.12
FOXC1-201ENST00000380874 C9JAW5 83 aa14.3□□□□□ -0.12
FOXC1-201ENST00000380874 RBMY1BA6NDE4 496 aaKnown RBP14.29□□□□□ -0.12
FOXC1-201ENST00000380874 RBMY1EA6NEQ0 496 aaKnown RBP14.29□□□□□ -0.12
FOXC1-201ENST00000380874 RBMY1DP0C7P1 496 aaKnown RBP14.29□□□□□ -0.12
FOXC1-201ENST00000380874 RPL36AP83881 106 aaKnown RBP14.29□□□□□ -0.12
FOXC1-201ENST00000380874 RPL36ALQ969Q0 106 aaKnown RBP14.29□□□□□ -0.12
FOXC1-201ENST00000380874 IGHV3-30-3P0DP02 117 aa14.29□□□□□ -0.12
FOXC1-201ENST00000380874 Q6ZUT4 128 aa14.28□□□□□ -0.12
FOXC1-201ENST00000380874 SLC25A29Q8N8R3 303 aa14.28□□□□□ -0.12
FOXC1-201ENST00000380874 CELSR2Q9HCU4 2923 aa14.28□□□□□ -0.12
FOXC1-201ENST00000380874 DNAJC9-AS1A6NH13 148 aa14.28□□□□□ -0.12
FOXC1-201ENST00000380874 DAND5Q8N907 189 aa14.28□□□□□ -0.12
FOXC1-201ENST00000380874 Q6ZSN1 163 aa14.28□□□□□ -0.12
FOXC1-201ENST00000380874 CITED2Q99967 270 aaPredicted RBP14.28□□□□□ -0.12
FOXC1-201ENST00000380874 NOP10Q9NPE3 64 aaKnown RBP14.28□□□□□ -0.12
FOXC1-201ENST00000380874 TMEM223A0PJW6 202 aa14.27□□□□□ -0.12
FOXC1-201ENST00000380874 GAGE7O76087 117 aa14.27□□□□□ -0.12
FOXC1-201ENST00000380874 GAGE12FP0CL80 117 aa14.27□□□□□ -0.12
FOXC1-201ENST00000380874 GAGE12GP0CL81 117 aa14.27□□□□□ -0.12
FOXC1-201ENST00000380874 GAGE12IP0CL82 117 aa14.27□□□□□ -0.12
FOXC1-201ENST00000380874 C10orf126Q8N4M7 172 aa14.27□□□□□ -0.12
FOXC1-201ENST00000380874 TOMM7Q9P0U1 55 aa14.27□□□□□ -0.12
FOXC1-201ENST00000380874 MGAM2Q2M2H8 2515 aa14.27□□□□□ -0.12
FOXC1-201ENST00000380874 GAGE12HA6NDE8 117 aa14.27□□□□□ -0.13
FOXC1-201ENST00000380874 CFAP126Q5VTH2 177 aa14.27□□□□□ -0.13
FOXC1-201ENST00000380874 LINC00467Q9BRT7 94 aa14.27□□□□□ -0.13
FOXC1-201ENST00000380874 CKS1BP61024 79 aa14.27□□□□□ -0.13
FOXC1-201ENST00000380874 SPANXB1Q9NS25 103 aaPredicted RBP14.27□□□□□ -0.13
FOXC1-201ENST00000380874 CFC1BP0CG36 223 aa14.26□□□□□ -0.13
FOXC1-201ENST00000380874 CFC1P0CG37 223 aa14.26□□□□□ -0.13
FOXC1-201ENST00000380874 CIRBPQ14011 172 aaKnown RBP14.26□□□□□ -0.13
FOXC1-201ENST00000380874 INSL3P51460 131 aa14.26□□□□□ -0.13
FOXC1-201ENST00000380874 COX6CP09669 75 aa14.26□□□□□ -0.13
FOXC1-201ENST00000380874 TEX29Q8N6K0 151 aa14.25□□□□□ -0.13
FOXC1-201ENST00000380874 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.25□□□□□ -0.13
FOXC1-201ENST00000380874 TRGV4A0A0C4DH28 118 aa14.25□□□□□ -0.13
FOXC1-201ENST00000380874 IGHV3-30P01768 117 aa14.24□□□□□ -0.13
FOXC1-201ENST00000380874 IGHV3-30-5P0DP03 117 aa14.24□□□□□ -0.13
FOXC1-201ENST00000380874 POM121L12Q8N7R1 296 aa14.24□□□□□ -0.13
FOXC1-201ENST00000380874 TCL1BO95988 128 aa14.24□□□□□ -0.13
FOXC1-201ENST00000380874 Q6ZTI0 123 aa14.23□□□□□ -0.13
FOXC1-201ENST00000380874 A0A096LNT2 108 aa14.23□□□□□ -0.13
FOXC1-201ENST00000380874 A0A0J9YXY3 114 aa14.22□□□□□ -0.13
FOXC1-201ENST00000380874 NFE4Q86UQ8 179 aa14.22□□□□□ -0.13
FOXC1-201ENST00000380874 WFDC10AQ9H1F0 79 aa14.22□□□□□ -0.13
FOXC1-201ENST00000380874 PF4P02776 101 aa14.22□□□□□ -0.13
FOXC1-201ENST00000380874 SPANXA1Q9NS26 97 aa14.22□□□□□ -0.13
FOXC1-201ENST00000380874 TMEM101Q96IK0 257 aa14.22□□□□□ -0.13
FOXC1-201ENST00000380874 TRBV20-1A0A075B6N2 111 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms