RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 MAPKAPK5-AS1Q8N8E1 139 aa16.69■□□□□ 0.26
VPS16-201ENST00000380443 DAZ2Q13117 558 aaKnown RBP16.68■□□□□ 0.26
VPS16-201ENST00000380443 LINC00482Q8N8I6 264 aa16.68■□□□□ 0.26
VPS16-201ENST00000380443 OR4C5Q8NGB2 326 aa16.68■□□□□ 0.26
VPS16-201ENST00000380443 C16orf74Q96GX8 76 aa16.68■□□□□ 0.26
VPS16-201ENST00000380443 TM2D2Q9BX73 214 aa16.68■□□□□ 0.26
VPS16-201ENST00000380443 TTTY13Q9BZ97 58 aa16.68■□□□□ 0.26
VPS16-201ENST00000380443 IGHV3OR16-12A0A075B7B8 117 aa16.68■□□□□ 0.26
VPS16-201ENST00000380443 PRADC1Q9BSG0 188 aa16.68■□□□□ 0.26
VPS16-201ENST00000380443 INSL3P51460 131 aa16.67■□□□□ 0.26
VPS16-201ENST00000380443 KRTAP10-3P60369 221 aa16.67■□□□□ 0.26
VPS16-201ENST00000380443 Q6ZSN1 163 aa16.67■□□□□ 0.26
VPS16-201ENST00000380443 VCX2Q9H322 139 aa16.67■□□□□ 0.26
VPS16-201ENST00000380443 GIG44P09565 113 aaPredicted RBP16.66■□□□□ 0.26
VPS16-201ENST00000380443 SPANXA1Q9NS26 97 aa16.66■□□□□ 0.26
VPS16-201ENST00000380443 NACAE9PAV3 2078 aa16.66■□□□□ 0.26
VPS16-201ENST00000380443 TRGV1A0A0A0MS02 117 aa16.66■□□□□ 0.26
VPS16-201ENST00000380443 TRAV4A0A0B4J268 109 aa16.66■□□□□ 0.26
VPS16-201ENST00000380443 TRBV10-1A0A0K0K1A3 114 aa16.66■□□□□ 0.26
VPS16-201ENST00000380443 WNK1Q9H4A3 2382 aa16.65■□□□□ 0.26
VPS16-201ENST00000380443 IGLV4-3A0A075B6K6 122 aa16.65■□□□□ 0.26
VPS16-201ENST00000380443 VAMP3Q15836 100 aa16.65■□□□□ 0.26
VPS16-201ENST00000380443 KRTAP24-1Q3LI83 254 aa16.65■□□□□ 0.26
VPS16-201ENST00000380443 Q6ZVH6 145 aa16.65■□□□□ 0.26
VPS16-201ENST00000380443 CEND1Q8N111 149 aa16.65■□□□□ 0.26
VPS16-201ENST00000380443 DEFB104AQ8WTQ1 72 aa16.65■□□□□ 0.26
VPS16-201ENST00000380443 PTTG1IPP53801 180 aa16.64■□□□□ 0.25
VPS16-201ENST00000380443 COTL1Q14019 142 aa16.63■□□□□ 0.25
VPS16-201ENST00000380443 FBN1P35555 2871 aaKnown RBP16.63■□□□□ 0.25
VPS16-201ENST00000380443 ATRQ13535 2644 aa16.63■□□□□ 0.25
VPS16-201ENST00000380443 C9orf118A6NHY6 69 aa16.63■□□□□ 0.25
VPS16-201ENST00000380443 GCSHP23434 173 aa16.63■□□□□ 0.25
VPS16-201ENST00000380443 AMELXQ99217 191 aa16.63■□□□□ 0.25
VPS16-201ENST00000380443 SMIM13P0DJ93 91 aa16.62■□□□□ 0.25
VPS16-201ENST00000380443 CSNK1G2-AS1Q8NCQ2 148 aa16.62■□□□□ 0.25
VPS16-201ENST00000380443 ZNRF2Q8NHG8 242 aa16.61■□□□□ 0.25
VPS16-201ENST00000380443 OVOL2Q9BRP0 275 aa16.61■□□□□ 0.25
VPS16-201ENST00000380443 CHCHD7Q9BUK0 85 aa16.61■□□□□ 0.25
VPS16-201ENST00000380443 RPL35AP18077 110 aaKnown RBP16.61■□□□□ 0.25
VPS16-201ENST00000380443 TMEM170BQ5T4T1 132 aa16.61■□□□□ 0.25
VPS16-201ENST00000380443 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.61■□□□□ 0.25
VPS16-201ENST00000380443 TRBV7-3A0A075B6L6 115 aa16.59■□□□□ 0.25
VPS16-201ENST00000380443 ZNF815PA8K554 130 aa16.59■□□□□ 0.25
VPS16-201ENST00000380443 RRN3P1Q2M238 152 aa16.59■□□□□ 0.25
VPS16-201ENST00000380443 HIST1H4GQ99525 98 aa16.59■□□□□ 0.25
VPS16-201ENST00000380443 MDFIQ99750 246 aa16.59■□□□□ 0.25
VPS16-201ENST00000380443 TIMM21Q9BVV7 248 aa16.59■□□□□ 0.25
VPS16-201ENST00000380443 RPL36AP83881 106 aaKnown RBP16.59■□□□□ 0.25
VPS16-201ENST00000380443 C9orf66Q5T8R8 295 aa16.59■□□□□ 0.25
VPS16-201ENST00000380443 RPL36ALQ969Q0 106 aaKnown RBP16.59■□□□□ 0.25
VPS16-201ENST00000380443 OPRPNQ99935 248 aaPredicted RBP16.59■□□□□ 0.25
VPS16-201ENST00000380443 K7EQD1 137 aa16.58■□□□□ 0.24
VPS16-201ENST00000380443 CCL25O15444 150 aa16.58■□□□□ 0.24
VPS16-201ENST00000380443 FXYD2P54710 66 aa16.58■□□□□ 0.24
VPS16-201ENST00000380443 Q6ZTI0 123 aa16.58■□□□□ 0.24
VPS16-201ENST00000380443 WFDC10AQ9H1F0 79 aa16.58■□□□□ 0.24
VPS16-201ENST00000380443 EMP1P54849 157 aa16.57■□□□□ 0.24
VPS16-201ENST00000380443 DAZ4Q86SG3 579 aaKnown RBP16.57■□□□□ 0.24
VPS16-201ENST00000380443 ZNF479Q96JC4 524 aa16.57■□□□□ 0.24
VPS16-201ENST00000380443 NOP10Q9NPE3 64 aaKnown RBP16.57■□□□□ 0.24
VPS16-201ENST00000380443 DAZ3Q9NR90 486 aaKnown RBP16.57■□□□□ 0.24
VPS16-201ENST00000380443 UBE2D4Q9Y2X8 147 aa16.57■□□□□ 0.24
VPS16-201ENST00000380443 TMEM223A0PJW6 202 aa16.56■□□□□ 0.24
VPS16-201ENST00000380443 PLAC8L1A1L4L8 177 aa16.56■□□□□ 0.24
VPS16-201ENST00000380443 MRPS36P82909 103 aaKnown RBP16.56■□□□□ 0.24
VPS16-201ENST00000380443 SMAGPQ0VAQ4 97 aa16.56■□□□□ 0.24
VPS16-201ENST00000380443 Q9UF83 564 aa16.56■□□□□ 0.24
VPS16-201ENST00000380443 CBY1Q9Y3M2 126 aa16.56■□□□□ 0.24
VPS16-201ENST00000380443 LEPROTO15243 131 aa16.55■□□□□ 0.24
VPS16-201ENST00000380443 AMMECR1LQ6DCA0 310 aa16.55■□□□□ 0.24
VPS16-201ENST00000380443 ZNF22P17026 224 aaPredicted RBP16.54■□□□□ 0.24
VPS16-201ENST00000380443 SCGB1D4Q6XE38 83 aa16.54■□□□□ 0.24
VPS16-201ENST00000380443 PLEKHB2Q96CS7 222 aa16.54■□□□□ 0.24
VPS16-201ENST00000380443 FAM104AQ969W3 186 aa16.54■□□□□ 0.24
VPS16-201ENST00000380443 J3QQQ9 107 aa16.53■□□□□ 0.24
VPS16-201ENST00000380443 LGALS3P17931 250 aaKnown RBP16.52■□□□□ 0.24
VPS16-201ENST00000380443 GTF2H5Q6ZYL4 71 aa16.52■□□□□ 0.24
VPS16-201ENST00000380443 PHLDA1Q8WV24 401 aaPredicted RBP16.52■□□□□ 0.24
VPS16-201ENST00000380443 A0A0J9YXV3 536 aa16.52■□□□□ 0.23
VPS16-201ENST00000380443 TINCRA0A1B0GVN0 87 aa16.52■□□□□ 0.23
VPS16-201ENST00000380443 SPANXB1Q9NS25 103 aaPredicted RBP16.52■□□□□ 0.23
VPS16-201ENST00000380443 TMEM238LA0A1B0GVL6 79 aa16.51■□□□□ 0.23
VPS16-201ENST00000380443 TRBV6-4A0A1B0GX49 114 aa16.51■□□□□ 0.23
VPS16-201ENST00000380443 A6NJY4 79 aa16.51■□□□□ 0.23
VPS16-201ENST00000380443 UBE2D3P61077 147 aa16.51■□□□□ 0.23
VPS16-201ENST00000380443 UBE2D2P62837 147 aa16.51■□□□□ 0.23
VPS16-201ENST00000380443 COL6A5A8TX70 2615 aa16.51■□□□□ 0.23
VPS16-201ENST00000380443 TRGV2A0A075B6R0 118 aa16.5■□□□□ 0.23
VPS16-201ENST00000380443 H3BUT2 72 aa16.5■□□□□ 0.23
VPS16-201ENST00000380443 SPATA3Q8NHX4 192 aa16.5■□□□□ 0.23
VPS16-201ENST00000380443 CSDC2Q9Y534 153 aaKnown RBP16.5■□□□□ 0.23
VPS16-201ENST00000380443 IGHV3-38A0A0C4DH36 116 aa16.49■□□□□ 0.23
VPS16-201ENST00000380443 SLC25A29Q8N8R3 303 aa16.49■□□□□ 0.23
VPS16-201ENST00000380443 NHP2Q9NX24 153 aaKnown RBP16.49■□□□□ 0.23
VPS16-201ENST00000380443 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.49■□□□□ 0.23
VPS16-201ENST00000380443 A0A1B0GWB2 263 aa16.49■□□□□ 0.23
VPS16-201ENST00000380443 IGKV2-29A2NJV5 120 aaPredicted RBP16.49■□□□□ 0.23
VPS16-201ENST00000380443 GAGE10A6NGK3 116 aa16.49■□□□□ 0.23
VPS16-201ENST00000380443 SMIM9A6NGZ8 99 aa16.49■□□□□ 0.23
VPS16-201ENST00000380443 CITED1Q99966 193 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms