RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 CRIP2P52943 208 aaPredicted RBP8.08□□□□□ -1.12
NEDD9-201ENST00000379433 DEFB131AP59861 70 aa8.08□□□□□ -1.12
NEDD9-201ENST00000379433 ZC2HC1BQ5TFG8 222 aa8.08□□□□□ -1.12
NEDD9-201ENST00000379433 ZNF575Q86XF7 245 aa8.08□□□□□ -1.12
NEDD9-201ENST00000379433 DYNLRB2Q8TF09 96 aa8.08□□□□□ -1.12
NEDD9-201ENST00000379433 TMEM70Q9BUB7 260 aa8.08□□□□□ -1.12
NEDD9-201ENST00000379433 H3BUA1 57 aa8.08□□□□□ -1.12
NEDD9-201ENST00000379433 LGALS1P09382 135 aaKnown RBP8.08□□□□□ -1.12
NEDD9-201ENST00000379433 OR5AL1P0C617 328 aa8.08□□□□□ -1.12
NEDD9-201ENST00000379433 SNRPD3P62318 126 aaKnown RBP8.08□□□□□ -1.12
NEDD9-201ENST00000379433 ZFAND2AQ8N6M9 145 aa8.08□□□□□ -1.12
NEDD9-201ENST00000379433 IGHV3-73A0A0B4J1V6 119 aa8.07□□□□□ -1.12
NEDD9-201ENST00000379433 C9orf47Q6ZRZ4 202 aa8.07□□□□□ -1.12
NEDD9-201ENST00000379433 Q6ZSV7 163 aa8.07□□□□□ -1.12
NEDD9-201ENST00000379433 DLX4Q92988 240 aaPredicted RBP8.07□□□□□ -1.12
NEDD9-201ENST00000379433 TRAV4A0A0B4J268 109 aa8.07□□□□□ -1.12
NEDD9-201ENST00000379433 C2orf70A6NJV1 201 aa8.07□□□□□ -1.12
NEDD9-201ENST00000379433 NSUN5P1Q3KNT7 163 aa8.07□□□□□ -1.12
NEDD9-201ENST00000379433 TRBV6-1A0A0K0K1D8 114 aa8.06□□□□□ -1.12
NEDD9-201ENST00000379433 H3BMG7 143 aa8.06□□□□□ -1.12
NEDD9-201ENST00000379433 NDUFC2O95298 119 aa8.06□□□□□ -1.12
NEDD9-201ENST00000379433 DCANP1Q8TF63 244 aa8.06□□□□□ -1.12
NEDD9-201ENST00000379433 MUC4Q99102 2169 aa8.06□□□□□ -1.12
NEDD9-201ENST00000379433 NSD1Q96L73 2696 aaPredicted RBP8.06□□□□□ -1.12
NEDD9-201ENST00000379433 TRAV21A0A0B4J279 112 aa8.06□□□□□ -1.12
NEDD9-201ENST00000379433 OVOL1O14753 267 aa8.06□□□□□ -1.12
NEDD9-201ENST00000379433 KLF5Q13887 457 aaPredicted RBP8.06□□□□□ -1.12
NEDD9-201ENST00000379433 SOCS3O14543 225 aa8.06□□□□□ -1.12
NEDD9-201ENST00000379433 CD28P10747 220 aa8.06□□□□□ -1.12
NEDD9-201ENST00000379433 ASIPP42127 132 aa8.06□□□□□ -1.12
NEDD9-201ENST00000379433 TMEM61Q8N0U2 210 aa8.06□□□□□ -1.12
NEDD9-201ENST00000379433 GTSCR1Q86UQ5 136 aa8.05□□□□□ -1.12
NEDD9-201ENST00000379433 CRLF1O75462 422 aa8.05□□□□□ -1.12
NEDD9-201ENST00000379433 RPL39LQ96EH5 51 aaKnown RBP8.05□□□□□ -1.12
NEDD9-201ENST00000379433 UBE2E2Q96LR5 201 aa8.05□□□□□ -1.12
NEDD9-201ENST00000379433 RBAKDNA6NC62 111 aa8.04□□□□□ -1.12
NEDD9-201ENST00000379433 SYS1-DBNDD2H3BUS1 97 aa8.04□□□□□ -1.12
NEDD9-201ENST00000379433 NMUP48645 174 aa8.04□□□□□ -1.12
NEDD9-201ENST00000379433 PRSS1P07477 247 aa8.04□□□□□ -1.12
NEDD9-201ENST00000379433 MAST4O15021 2626 aa8.04□□□□□ -1.12
NEDD9-201ENST00000379433 DPM2O94777 84 aa8.04□□□□□ -1.12
NEDD9-201ENST00000379433 CACNG7P62955 275 aa8.04□□□□□ -1.12
NEDD9-201ENST00000379433 RNF185Q96GF1 192 aa8.04□□□□□ -1.12
NEDD9-201ENST00000379433 LINC01619G3V211 115 aa8.03□□□□□ -1.12
NEDD9-201ENST00000379433 USP17L23D6RBM5 183 aa8.03□□□□□ -1.12
NEDD9-201ENST00000379433 FSHBP01225 129 aa8.03□□□□□ -1.12
NEDD9-201ENST00000379433 DPH3Q96FX2 82 aa8.03□□□□□ -1.12
NEDD9-201ENST00000379433 DSCR8Q96T75 97 aa8.03□□□□□ -1.12
NEDD9-201ENST00000379433 TMEM191AQ9H0A3 160 aa8.03□□□□□ -1.12
NEDD9-201ENST00000379433 CHCHD1Q96BP2 118 aaKnown RBP8.03□□□□□ -1.12
NEDD9-201ENST00000379433 SMIM13P0DJ93 91 aa8.02□□□□□ -1.13
NEDD9-201ENST00000379433 C3orf22Q8N5N4 141 aa8.02□□□□□ -1.13
NEDD9-201ENST00000379433 STAB1Q9NY15 2570 aa8.02□□□□□ -1.13
NEDD9-201ENST00000379433 FAM240AA0A1B0GVK7 77 aa8.01□□□□□ -1.13
NEDD9-201ENST00000379433 DUSP14O95147 198 aaKnown RBP8.01□□□□□ -1.13
NEDD9-201ENST00000379433 GCSHP23434 173 aa8.01□□□□□ -1.13
NEDD9-201ENST00000379433 KLK9Q2XQG4 91 aa8.01□□□□□ -1.13
NEDD9-201ENST00000379433 TMEM158Q8WZ71 300 aa8.01□□□□□ -1.13
NEDD9-201ENST00000379433 XCL2Q9UBD3 114 aa8.01□□□□□ -1.13
NEDD9-201ENST00000379433 ZNF493Q6ZR52 646 aa8.01□□□□□ -1.13
NEDD9-201ENST00000379433 TRRAPQ9Y4A5 3859 aa8.01□□□□□ -1.13
NEDD9-201ENST00000379433 AMTNQ6UX39 209 aa8.01□□□□□ -1.13
NEDD9-201ENST00000379433 Q8N1Y9 231 aa8.01□□□□□ -1.13
NEDD9-201ENST00000379433 WFDC10AQ9H1F0 79 aa8.01□□□□□ -1.13
NEDD9-201ENST00000379433 ZNF256Q9Y2P7 627 aaPredicted RBP8.01□□□□□ -1.13
NEDD9-201ENST00000379433 K7EMT4 169 aa8□□□□□ -1.13
NEDD9-201ENST00000379433 ZNF56Q15929 161 aa8□□□□□ -1.13
NEDD9-201ENST00000379433 Q6Q795 121 aa8□□□□□ -1.13
NEDD9-201ENST00000379433 ANKRD29Q8N6D5 301 aa8□□□□□ -1.13
NEDD9-201ENST00000379433 DKK2Q9UBU2 259 aa8□□□□□ -1.13
NEDD9-201ENST00000379433 A0A096LNJ9 63 aa8□□□□□ -1.13
NEDD9-201ENST00000379433 TRAV13-1A0A0B4J241 112 aa8□□□□□ -1.13
NEDD9-201ENST00000379433 A0A0J9YX75 114 aa8□□□□□ -1.13
NEDD9-201ENST00000379433 K7EQG2 157 aa8□□□□□ -1.13
NEDD9-201ENST00000379433 VCYO14598 125 aa8□□□□□ -1.13
NEDD9-201ENST00000379433 RNASE3P12724 160 aaKnown RBP8□□□□□ -1.13
NEDD9-201ENST00000379433 ZNF747Q9BV97 191 aa8□□□□□ -1.13
NEDD9-201ENST00000379433 HBDP02042 147 aa8□□□□□ -1.13
NEDD9-201ENST00000379433 UQCRQO14949 82 aa7.99□□□□□ -1.13
NEDD9-201ENST00000379433 TRACP01848 142 aa7.99□□□□□ -1.13
NEDD9-201ENST00000379433 PPDPFLQ8WWR9 84 aa7.99□□□□□ -1.13
NEDD9-201ENST00000379433 TTTY13Q9BZ97 58 aa7.99□□□□□ -1.13
NEDD9-201ENST00000379433 INAFM1C9JVW0 142 aa7.99□□□□□ -1.13
NEDD9-201ENST00000379433 APOC4P55056 127 aa7.99□□□□□ -1.13
NEDD9-201ENST00000379433 PRR26Q8N8Z3 221 aa7.99□□□□□ -1.13
NEDD9-201ENST00000379433 LINC01006Q8NI28 216 aa7.99□□□□□ -1.13
NEDD9-201ENST00000379433 IFI27L1Q96BM0 104 aa7.99□□□□□ -1.13
NEDD9-201ENST00000379433 PLEKHB2Q96CS7 222 aa7.99□□□□□ -1.13
NEDD9-201ENST00000379433 ZNF876PQ49A33 203 aa7.98□□□□□ -1.13
NEDD9-201ENST00000379433 COX8CQ7Z4L0 72 aa7.98□□□□□ -1.13
NEDD9-201ENST00000379433 IGHV3-16A0A0C4DH30 117 aa7.97□□□□□ -1.13
NEDD9-201ENST00000379433 KRTAP1-1Q07627 177 aa7.97□□□□□ -1.13
NEDD9-201ENST00000379433 ATP6V0E2Q8NHE4 81 aa7.97□□□□□ -1.13
NEDD9-201ENST00000379433 LY6G6DO95868 133 aa7.96□□□□□ -1.13
NEDD9-201ENST00000379433 PROK1P58294 105 aa7.96□□□□□ -1.13
NEDD9-201ENST00000379433 NOTCH1P46531 2555 aa7.96□□□□□ -1.13
NEDD9-201ENST00000379433 P0DMU3 169 aa7.96□□□□□ -1.14
NEDD9-201ENST00000379433 FAM231AP0DMU4 169 aa7.96□□□□□ -1.14
NEDD9-201ENST00000379433 FAM231CP0DMU5 169 aa7.96□□□□□ -1.14
NEDD9-201ENST00000379433 CD164L2Q6UWJ8 174 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms