RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 CHCHD5Q9BSY4 110 aa12.64□□□□□ -0.39
SSU72-203ENST00000378725 TMEM262E9PQX1 116 aa12.63□□□□□ -0.39
SSU72-203ENST00000378725 VCYO14598 125 aa12.63□□□□□ -0.39
SSU72-203ENST00000378725 PHOX2AO14813 284 aa12.63□□□□□ -0.39
SSU72-203ENST00000378725 TNFRSF6BO95407 300 aa12.63□□□□□ -0.39
SSU72-203ENST00000378725 RPL32P62910 135 aaKnown RBP12.63□□□□□ -0.39
SSU72-203ENST00000378725 DEFB104AQ8WTQ1 72 aa12.63□□□□□ -0.39
SSU72-203ENST00000378725 TMEM243Q9BU79 118 aa12.63□□□□□ -0.39
SSU72-203ENST00000378725 A0A087WX48 190 aa12.62□□□□□ -0.39
SSU72-203ENST00000378725 ATRAIDQ6UW56 229 aa12.62□□□□□ -0.39
SSU72-203ENST00000378725 ORMDL3Q8N138 153 aa12.62□□□□□ -0.39
SSU72-203ENST00000378725 TSHBP01222 138 aa12.61□□□□□ -0.39
SSU72-203ENST00000378725 AMTP48728 403 aa12.61□□□□□ -0.39
SSU72-203ENST00000378725 LAGE3Q14657 143 aa12.61□□□□□ -0.39
SSU72-203ENST00000378725 Q6ZRN7 208 aaPredicted RBP12.61□□□□□ -0.39
SSU72-203ENST00000378725 NFE4Q86UQ8 179 aa12.61□□□□□ -0.39
SSU72-203ENST00000378725 GNB1LQ9BYB4 327 aa12.61□□□□□ -0.39
SSU72-203ENST00000378725 NPYP01303 97 aa12.6□□□□□ -0.39
SSU72-203ENST00000378725 GAGE6Q13070 117 aa12.6□□□□□ -0.39
SSU72-203ENST00000378725 ELOBQ15370 118 aa12.6□□□□□ -0.39
SSU72-203ENST00000378725 COX19Q49B96 90 aa12.6□□□□□ -0.39
SSU72-203ENST00000378725 MPV17L2Q567V2 206 aa12.6□□□□□ -0.39
SSU72-203ENST00000378725 PRELID3AQ96N28 172 aa12.6□□□□□ -0.39
SSU72-203ENST00000378725 LAMTOR2Q9Y2Q5 125 aa12.6□□□□□ -0.39
SSU72-203ENST00000378725 DNAH2Q9P225 4427 aa12.59□□□□□ -0.39
SSU72-203ENST00000378725 PRSS47A8MTI9 375 aa12.59□□□□□ -0.39
SSU72-203ENST00000378725 HLA-DQA1P01909 254 aa12.59□□□□□ -0.39
SSU72-203ENST00000378725 APCSP02743 223 aa12.59□□□□□ -0.39
SSU72-203ENST00000378725 ESDP10768 282 aa12.59□□□□□ -0.39
SSU72-203ENST00000378725 A0A1B0GUV1 79 aa12.58□□□□□ -0.4
SSU72-203ENST00000378725 PRSS29PA6NIE9 313 aa12.58□□□□□ -0.4
SSU72-203ENST00000378725 H7C423 109 aa12.58□□□□□ -0.4
SSU72-203ENST00000378725 RBX1P62877 108 aa12.58□□□□□ -0.4
SSU72-203ENST00000378725 KLK12Q9UKR0 248 aa12.58□□□□□ -0.4
SSU72-203ENST00000378725 TGIF2-C20orf24A0A0A6YYL0 155 aa12.57□□□□□ -0.4
SSU72-203ENST00000378725 Q8N976 141 aa12.57□□□□□ -0.4
SSU72-203ENST00000378725 YPEL4Q96NS1 127 aa12.57□□□□□ -0.4
SSU72-203ENST00000378725 KIR2DL4Q99706 377 aa12.57□□□□□ -0.4
SSU72-203ENST00000378725 DNAH10Q8IVF4 4471 aa12.57□□□□□ -0.4
SSU72-203ENST00000378725 TRAV8-3A0A0A6YYJ7 113 aa12.56□□□□□ -0.4
SSU72-203ENST00000378725 UBE2L6O14933 153 aa12.56□□□□□ -0.4
SSU72-203ENST00000378725 SMIM2Q9BVW6 85 aa12.56□□□□□ -0.4
SSU72-203ENST00000378725 MT-ND6P03923 174 aa12.55□□□□□ -0.4
SSU72-203ENST00000378725 TNP2Q05952 138 aa12.55□□□□□ -0.4
SSU72-203ENST00000378725 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.54□□□□□ -0.4
SSU72-203ENST00000378725 IGKV2-29A2NJV5 120 aaPredicted RBP12.54□□□□□ -0.4
SSU72-203ENST00000378725 TCAPO15273 167 aa12.54□□□□□ -0.4
SSU72-203ENST00000378725 ANGP03950 147 aaKnown RBP12.54□□□□□ -0.4
SSU72-203ENST00000378725 FCER1GP30273 86 aa12.54□□□□□ -0.4
SSU72-203ENST00000378725 KIAA1644Q3SXP7 199 aa12.54□□□□□ -0.4
SSU72-203ENST00000378725 ENHOQ6UWT2 76 aa12.54□□□□□ -0.4
SSU72-203ENST00000378725 C20orf203Q8NBC4 194 aa12.54□□□□□ -0.4
SSU72-203ENST00000378725 PRR34Q9NV39 138 aa12.54□□□□□ -0.4
SSU72-203ENST00000378725 IGLV4-60A0A075B6I1 120 aa12.53□□□□□ -0.4
SSU72-203ENST00000378725 Q0VG73 95 aa12.53□□□□□ -0.4
SSU72-203ENST00000378725 Q9HAA7 133 aa12.53□□□□□ -0.4
SSU72-203ENST00000378725 SMCO4Q9NRQ5 59 aa12.53□□□□□ -0.4
SSU72-203ENST00000378725 FRAS1Q86XX4 4008 aa12.52□□□□□ -0.4
SSU72-203ENST00000378725 A0A1B0GVY2 172 aa12.52□□□□□ -0.41
SSU72-203ENST00000378725 UBE2WQ96B02 151 aa12.52□□□□□ -0.41
SSU72-203ENST00000378725 MRPL18Q9H0U6 180 aaKnown RBP12.52□□□□□ -0.41
SSU72-203ENST00000378725 MAP1LC3AQ9H492 121 aa12.52□□□□□ -0.41
SSU72-203ENST00000378725 DNAH17Q9UFH2 4485 aa12.52□□□□□ -0.41
SSU72-203ENST00000378725 FGF6P10767 208 aa12.51□□□□□ -0.41
SSU72-203ENST00000378725 LINC00269Q8N2A0 174 aa12.51□□□□□ -0.41
SSU72-203ENST00000378725 TM2D2Q9BX73 214 aa12.51□□□□□ -0.41
SSU72-203ENST00000378725 ZNF25P17030 456 aaPredicted RBP12.5□□□□□ -0.41
SSU72-203ENST00000378725 FABP9Q0Z7S8 132 aa12.5□□□□□ -0.41
SSU72-203ENST00000378725 AMMECR1LQ6DCA0 310 aa12.5□□□□□ -0.41
SSU72-203ENST00000378725 MRPL52Q86TS9 123 aaKnown RBP12.5□□□□□ -0.41
SSU72-203ENST00000378725 CBLN2Q8IUK8 224 aa12.5□□□□□ -0.41
SSU72-203ENST00000378725 Q8N8P6 123 aa12.5□□□□□ -0.41
SSU72-203ENST00000378725 ALKBH7Q9BT30 221 aaPredicted RBP12.5□□□□□ -0.41
SSU72-203ENST00000378725 LOC389332A0A1B0GUA5 103 aa12.49□□□□□ -0.41
SSU72-203ENST00000378725 RMI2Q96E14 147 aa12.49□□□□□ -0.41
SSU72-203ENST00000378725 TRAPPC1Q9Y5R8 145 aa12.49□□□□□ -0.41
SSU72-203ENST00000378725 COX11Q9Y6N1 276 aa12.49□□□□□ -0.41
SSU72-203ENST00000378725 CRPP02741 224 aa12.48□□□□□ -0.41
SSU72-203ENST00000378725 RAB5AP20339 215 aa12.48□□□□□ -0.41
SSU72-203ENST00000378725 REG3AQ06141 175 aa12.48□□□□□ -0.41
SSU72-203ENST00000378725 MIAQ16674 131 aa12.48□□□□□ -0.41
SSU72-203ENST00000378725 RNASEKQ6P5S7 137 aaKnown RBP12.48□□□□□ -0.41
SSU72-203ENST00000378725 FAT2Q9NYQ8 4349 aa12.48□□□□□ -0.41
SSU72-203ENST00000378725 TMEM18Q96B42 140 aa12.47□□□□□ -0.41
SSU72-203ENST00000378725 NXT2Q9NPJ8 142 aaKnown RBP12.47□□□□□ -0.41
SSU72-203ENST00000378725 CSDC2Q9Y534 153 aaKnown RBP12.47□□□□□ -0.41
SSU72-203ENST00000378725 LRCOL1A6NCL2 159 aa12.46□□□□□ -0.41
SSU72-203ENST00000378725 K7EMI3 77 aa12.46□□□□□ -0.41
SSU72-203ENST00000378725 PSCAO43653 123 aa12.46□□□□□ -0.41
SSU72-203ENST00000378725 TMEM101Q96IK0 257 aa12.46□□□□□ -0.41
SSU72-203ENST00000378725 TIMM21Q9BVV7 248 aa12.46□□□□□ -0.41
SSU72-203ENST00000378725 UBE2D4Q9Y2X8 147 aa12.46□□□□□ -0.41
SSU72-203ENST00000378725 IGKV2D-24A0A075B6R9 120 aa12.45□□□□□ -0.42
SSU72-203ENST00000378725 A0A087WTM6 91 aa12.45□□□□□ -0.42
SSU72-203ENST00000378725 IFI27P40305 119 aaPredicted RBP12.45□□□□□ -0.42
SSU72-203ENST00000378725 SMAGPQ0VAQ4 97 aa12.45□□□□□ -0.42
SSU72-203ENST00000378725 CLPSL2Q6UWE3 100 aa12.45□□□□□ -0.42
SSU72-203ENST00000378725 MAPKAPK5-AS1Q8N8E1 139 aa12.45□□□□□ -0.42
SSU72-203ENST00000378725 CDC42SE2Q9NRR3 84 aa12.45□□□□□ -0.42
SSU72-203ENST00000378725 TRAV8-4A0A0B4J246 113 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms