RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 TMEM263Q8WUH6 116 aaKnown RBP13.22□□□□□ -0.29
TDP2-202ENST00000378198 INSP01308 110 aa13.22□□□□□ -0.29
TDP2-202ENST00000378198 IGHV3-53P01767 116 aa13.22□□□□□ -0.29
TDP2-202ENST00000378198 PRB1P04280 392 aa13.22□□□□□ -0.29
TDP2-202ENST00000378198 BEAN1Q3B7T3 259 aa13.22□□□□□ -0.29
TDP2-202ENST00000378198 CEMP1Q6PRD7 247 aaPredicted RBP13.22□□□□□ -0.29
TDP2-202ENST00000378198 SBSPONQ8IVN8 264 aa13.22□□□□□ -0.29
TDP2-202ENST00000378198 UBE2D4Q9Y2X8 147 aa13.22□□□□□ -0.29
TDP2-202ENST00000378198 ANKRD17O75179 2603 aaKnown RBP13.21□□□□□ -0.29
TDP2-202ENST00000378198 IGHV1-58A0A0C4DH39 117 aa13.21□□□□□ -0.29
TDP2-202ENST00000378198 TINCRA0A1B0GVN0 87 aa13.21□□□□□ -0.29
TDP2-202ENST00000378198 IGHV3-33P01772 117 aa13.21□□□□□ -0.29
TDP2-202ENST00000378198 KRTAP10-9P60411 292 aa13.21□□□□□ -0.29
TDP2-202ENST00000378198 CLUHP3Q96NS8 147 aa13.2□□□□□ -0.3
TDP2-202ENST00000378198 ERG28Q9UKR5 140 aa13.2□□□□□ -0.3
TDP2-202ENST00000378198 RS1O15537 224 aa13.2□□□□□ -0.3
TDP2-202ENST00000378198 Q9UF83 564 aa13.2□□□□□ -0.3
TDP2-202ENST00000378198 USP9XQ93008 2570 aaPredicted RBP13.2□□□□□ -0.3
TDP2-202ENST00000378198 CFAP46Q8IYW2 2715 aa13.2□□□□□ -0.3
TDP2-202ENST00000378198 EIF4EBP3O60516 100 aaPredicted RBP13.19□□□□□ -0.3
TDP2-202ENST00000378198 CRYBG3Q68DQ2 2970 aa13.19□□□□□ -0.3
TDP2-202ENST00000378198 TEN1Q86WV5 123 aa13.19□□□□□ -0.3
TDP2-202ENST00000378198 Q96MF0 132 aa13.19□□□□□ -0.3
TDP2-202ENST00000378198 TRAV8-3A0A0A6YYJ7 113 aa13.18□□□□□ -0.3
TDP2-202ENST00000378198 SMAGPQ0VAQ4 97 aa13.18□□□□□ -0.3
TDP2-202ENST00000378198 PPDPFLQ8WWR9 84 aa13.18□□□□□ -0.3
TDP2-202ENST00000378198 RNASE13Q5GAN3 156 aaKnown RBP13.17□□□□□ -0.3
TDP2-202ENST00000378198 TMEM86BQ8N661 226 aa13.17□□□□□ -0.3
TDP2-202ENST00000378198 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.17□□□□□ -0.3
TDP2-202ENST00000378198 IGKV2-29A2NJV5 120 aaPredicted RBP13.17□□□□□ -0.3
TDP2-202ENST00000378198 VSIG2Q96IQ7 327 aa13.17□□□□□ -0.3
TDP2-202ENST00000378198 LITAFQ99732 161 aa13.17□□□□□ -0.3
TDP2-202ENST00000378198 TRAV25A0A0B4J276 109 aa13.16□□□□□ -0.3
TDP2-202ENST00000378198 IGSF10Q6WRI0 2623 aa13.16□□□□□ -0.3
TDP2-202ENST00000378198 SPANXDQ9BXN6 97 aa13.16□□□□□ -0.3
TDP2-202ENST00000378198 SPANXCQ9NY87 97 aa13.16□□□□□ -0.3
TDP2-202ENST00000378198 NDUFA12Q9UI09 145 aa13.16□□□□□ -0.3
TDP2-202ENST00000378198 CACNA1AO00555 2505 aa13.16□□□□□ -0.3
TDP2-202ENST00000378198 FLNCQ14315 2725 aa13.15□□□□□ -0.3
TDP2-202ENST00000378198 ADARB2-AS1A8MUL3 147 aa13.15□□□□□ -0.3
TDP2-202ENST00000378198 Q6ZUT4 128 aa13.15□□□□□ -0.3
TDP2-202ENST00000378198 IGHV3-38A0A0C4DH36 116 aa13.14□□□□□ -0.31
TDP2-202ENST00000378198 CARD19Q96LW7 228 aa13.14□□□□□ -0.31
TDP2-202ENST00000378198 GEMIN7Q9H840 131 aaKnown RBP13.14□□□□□ -0.31
TDP2-202ENST00000378198 M0QXV9 152 aa13.14□□□□□ -0.31
TDP2-202ENST00000378198 Q6ZSV7 163 aa13.14□□□□□ -0.31
TDP2-202ENST00000378198 BBC3Q96PG8 261 aaPredicted RBP13.14□□□□□ -0.31
TDP2-202ENST00000378198 PIEZO1Q92508 2521 aa13.14□□□□□ -0.31
TDP2-202ENST00000378198 Q1RN00 199 aa13.13□□□□□ -0.31
TDP2-202ENST00000378198 ODF3L2Q3SX64 289 aa13.13□□□□□ -0.31
TDP2-202ENST00000378198 STHQ8IWL8 128 aa13.13□□□□□ -0.31
TDP2-202ENST00000378198 XCL2Q9UBD3 114 aa13.13□□□□□ -0.31
TDP2-202ENST00000378198 MAP1AP78559 2803 aaPredicted RBP13.13□□□□□ -0.31
TDP2-202ENST00000378198 H7C2G1 150 aa13.12□□□□□ -0.31
TDP2-202ENST00000378198 SPINK8P0C7L1 97 aa13.12□□□□□ -0.31
TDP2-202ENST00000378198 PRSS2P07478 247 aa13.12□□□□□ -0.31
TDP2-202ENST00000378198 TIRAPP58753 221 aa13.12□□□□□ -0.31
TDP2-202ENST00000378198 ZFAND6Q6FIF0 208 aa13.12□□□□□ -0.31
TDP2-202ENST00000378198 TEX29Q8N6K0 151 aa13.12□□□□□ -0.31
TDP2-202ENST00000378198 TRBV30A0A0K0K1B3 111 aa13.11□□□□□ -0.31
TDP2-202ENST00000378198 SLC25A20O43772 301 aa13.11□□□□□ -0.31
TDP2-202ENST00000378198 MIAQ16674 131 aa13.11□□□□□ -0.31
TDP2-202ENST00000378198 ZNF843Q8N446 348 aa13.11□□□□□ -0.31
TDP2-202ENST00000378198 ADAMTSL4-AS1Q5T5F5 129 aa13.11□□□□□ -0.31
TDP2-202ENST00000378198 DGAT2L7PQ6IED9 249 aa13.11□□□□□ -0.31
TDP2-202ENST00000378198 KRTAP1-3Q8IUG1 177 aa13.11□□□□□ -0.31
TDP2-202ENST00000378198 C1orf158Q8N1D5 194 aa13.11□□□□□ -0.31
TDP2-202ENST00000378198 ANKRD29Q8N6D5 301 aa13.11□□□□□ -0.31
TDP2-202ENST00000378198 IL17DQ8TAD2 202 aa13.11□□□□□ -0.31
TDP2-202ENST00000378198 CDIP1Q9H305 208 aa13.11□□□□□ -0.31
TDP2-202ENST00000378198 YAE1D1Q9NRH1 226 aa13.11□□□□□ -0.31
TDP2-202ENST00000378198 IGLV5-45A0A087WSX0 123 aa13.1□□□□□ -0.31
TDP2-202ENST00000378198 C9JAW5 83 aa13.1□□□□□ -0.31
TDP2-202ENST00000378198 TIMM17BO60830 172 aa13.1□□□□□ -0.31
TDP2-202ENST00000378198 ATXN8Q156A1 80 aa13.1□□□□□ -0.31
TDP2-202ENST00000378198 UTP20O75691 2785 aaKnown RBP13.1□□□□□ -0.31
TDP2-202ENST00000378198 FBN2P35556 2912 aa13.09□□□□□ -0.31
TDP2-202ENST00000378198 HIST2H2BDQ6DRA6 164 aa13.09□□□□□ -0.31
TDP2-202ENST00000378198 RNF183Q96D59 192 aa13.09□□□□□ -0.31
TDP2-202ENST00000378198 A8MZ25 164 aa13.09□□□□□ -0.31
TDP2-202ENST00000378198 FHL3Q13643 280 aa13.09□□□□□ -0.31
TDP2-202ENST00000378198 CDKN2A-AS1Q9UH64 79 aa13.09□□□□□ -0.31
TDP2-202ENST00000378198 CSMD2Q7Z408 3487 aa13.08□□□□□ -0.32
TDP2-202ENST00000378198 IGHV3OR16-12A0A075B7B8 117 aa13.08□□□□□ -0.32
TDP2-202ENST00000378198 TRGV1A0A0A0MS02 117 aa13.07□□□□□ -0.32
TDP2-202ENST00000378198 DNAJC9-AS1A6NH13 148 aa13.07□□□□□ -0.32
TDP2-202ENST00000378198 IFITM1P13164 125 aa13.07□□□□□ -0.32
TDP2-202ENST00000378198 TRBV10-1A0A0K0K1A3 114 aa13.06□□□□□ -0.32
TDP2-202ENST00000378198 NDUFA1O15239 70 aa13.06□□□□□ -0.32
TDP2-202ENST00000378198 LINC01620Q4KN68 170 aa13.06□□□□□ -0.32
TDP2-202ENST00000378198 LINC01600Q96MT4 127 aa13.06□□□□□ -0.32
TDP2-202ENST00000378198 USP9YO00507 2555 aaPredicted RBP13.06□□□□□ -0.32
TDP2-202ENST00000378198 CCL24O00175 119 aa13.06□□□□□ -0.32
TDP2-202ENST00000378198 TRIAP1O43715 76 aa13.06□□□□□ -0.32
TDP2-202ENST00000378198 HERVK_113P63121 156 aa13.06□□□□□ -0.32
TDP2-202ENST00000378198 RPL36AP83881 106 aaKnown RBP13.06□□□□□ -0.32
TDP2-202ENST00000378198 RPL36ALQ969Q0 106 aaKnown RBP13.06□□□□□ -0.32
TDP2-202ENST00000378198 TMEM101Q96IK0 257 aa13.06□□□□□ -0.32
TDP2-202ENST00000378198 FAM19A3Q7Z5A8 133 aa13.05□□□□□ -0.32
TDP2-202ENST00000378198 ZANQ9Y493 2812 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms