RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 TMEM243Q9BU79 118 aa13.68□□□□□ -0.22
TRIM13-203ENST00000378183 LRCOL1A6NCL2 159 aa13.67□□□□□ -0.22
TRIM13-203ENST00000378183 POLR2KP53803 58 aaKnown RBP13.67□□□□□ -0.22
TRIM13-203ENST00000378183 PKIAP61925 76 aa13.67□□□□□ -0.22
TRIM13-203ENST00000378183 ENHOQ6UWT2 76 aa13.67□□□□□ -0.22
TRIM13-203ENST00000378183 NRACQ8N912 160 aa13.67□□□□□ -0.22
TRIM13-203ENST00000378183 UBE2WQ96B02 151 aa13.67□□□□□ -0.22
TRIM13-203ENST00000378183 ST20Q9HBF5 79 aa13.67□□□□□ -0.22
TRIM13-203ENST00000378183 PSCAO43653 123 aa13.66□□□□□ -0.22
TRIM13-203ENST00000378183 AMTP48728 403 aa13.66□□□□□ -0.22
TRIM13-203ENST00000378183 C10orf91Q5T1B1 145 aa13.66□□□□□ -0.22
TRIM13-203ENST00000378183 ATP5L2Q7Z4Y8 100 aa13.66□□□□□ -0.22
TRIM13-203ENST00000378183 TMEM70Q9BUB7 260 aa13.66□□□□□ -0.22
TRIM13-203ENST00000378183 I3L3M4 83 aa13.65□□□□□ -0.22
TRIM13-203ENST00000378183 ANGP03950 147 aaKnown RBP13.65□□□□□ -0.22
TRIM13-203ENST00000378183 S100A8P05109 93 aa13.65□□□□□ -0.22
TRIM13-203ENST00000378183 KIAA1109Q2LD37 5005 aa13.65□□□□□ -0.22
TRIM13-203ENST00000378183 LRP1BQ9NZR2 4599 aa13.64□□□□□ -0.23
TRIM13-203ENST00000378183 PMCHP20382 165 aa13.64□□□□□ -0.23
TRIM13-203ENST00000378183 MAPKAPK5-AS1Q8N8E1 139 aa13.64□□□□□ -0.23
TRIM13-203ENST00000378183 TM2D2Q9BX73 214 aa13.64□□□□□ -0.23
TRIM13-203ENST00000378183 TSHBP01222 138 aa13.63□□□□□ -0.23
TRIM13-203ENST00000378183 FUSP35637 526 aaKnown RBP eCLIP13.63□□□□□ -0.23
TRIM13-203ENST00000378183 C20orf203Q8NBC4 194 aa13.63□□□□□ -0.23
TRIM13-203ENST00000378183 IGLV4-60A0A075B6I1 120 aa13.62□□□□□ -0.23
TRIM13-203ENST00000378183 TRBV27A0A0K0K1C4 114 aa13.62□□□□□ -0.23
TRIM13-203ENST00000378183 A0A1B0GUV1 79 aa13.62□□□□□ -0.23
TRIM13-203ENST00000378183 Q0VG73 95 aa13.62□□□□□ -0.23
TRIM13-203ENST00000378183 PRR34Q9NV39 138 aa13.62□□□□□ -0.23
TRIM13-203ENST00000378183 TMEM242Q9NWH2 141 aa13.62□□□□□ -0.23
TRIM13-203ENST00000378183 CARHSP1Q9Y2V2 147 aaKnown RBP13.62□□□□□ -0.23
TRIM13-203ENST00000378183 IGKV2D-24A0A075B6R9 120 aa13.61□□□□□ -0.23
TRIM13-203ENST00000378183 C16orf90A8MZG2 172 aa13.61□□□□□ -0.23
TRIM13-203ENST00000378183 EREGO14944 169 aa13.61□□□□□ -0.23
TRIM13-203ENST00000378183 PPP1R17O96001 155 aa13.61□□□□□ -0.23
TRIM13-203ENST00000378183 APCSP02743 223 aa13.61□□□□□ -0.23
TRIM13-203ENST00000378183 CKS2P33552 79 aa13.61□□□□□ -0.23
TRIM13-203ENST00000378183 WFDC2Q14508 124 aa13.61□□□□□ -0.23
TRIM13-203ENST00000378183 LINC00269Q8N2A0 174 aa13.61□□□□□ -0.23
TRIM13-203ENST00000378183 IMMP2LQ96T52 175 aa13.61□□□□□ -0.23
TRIM13-203ENST00000378183 CTDSP1Q9GZU7 261 aa13.61□□□□□ -0.23
TRIM13-203ENST00000378183 TRBV24-1A0A075B6N3 115 aa13.6□□□□□ -0.23
TRIM13-203ENST00000378183 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.6□□□□□ -0.23
TRIM13-203ENST00000378183 IGKV2-29A2NJV5 120 aaPredicted RBP13.6□□□□□ -0.23
TRIM13-203ENST00000378183 D6R8Y8 96 aa13.6□□□□□ -0.23
TRIM13-203ENST00000378183 UBE2L6O14933 153 aa13.6□□□□□ -0.23
TRIM13-203ENST00000378183 SUMO2P61956 95 aaKnown RBP13.6□□□□□ -0.23
TRIM13-203ENST00000378183 CLPSL2Q6UWE3 100 aa13.6□□□□□ -0.23
TRIM13-203ENST00000378183 RMI2Q96E14 147 aa13.6□□□□□ -0.23
TRIM13-203ENST00000378183 BTF3L4Q96K17 158 aa13.6□□□□□ -0.23
TRIM13-203ENST00000378183 VCYO14598 125 aa13.59□□□□□ -0.23
TRIM13-203ENST00000378183 CRPP02741 224 aa13.59□□□□□ -0.23
TRIM13-203ENST00000378183 ESDP10768 282 aa13.59□□□□□ -0.23
TRIM13-203ENST00000378183 COX11Q9Y6N1 276 aa13.59□□□□□ -0.23
TRIM13-203ENST00000378183 TNFRSF6BO95407 300 aa13.58□□□□□ -0.24
TRIM13-203ENST00000378183 PGPEP1Q9NXJ5 209 aa13.58□□□□□ -0.24
TRIM13-203ENST00000378183 C7orf77A4D0Y5 90 aa13.57□□□□□ -0.24
TRIM13-203ENST00000378183 H7C423 109 aa13.57□□□□□ -0.24
TRIM13-203ENST00000378183 NPYP01303 97 aa13.57□□□□□ -0.24
TRIM13-203ENST00000378183 REG3AQ06141 175 aa13.57□□□□□ -0.24
TRIM13-203ENST00000378183 MIAQ16674 131 aa13.57□□□□□ -0.24
TRIM13-203ENST00000378183 BAALCQ8WXS3 180 aa13.57□□□□□ -0.24
TRIM13-203ENST00000378183 C20orf78Q9BR46 151 aa13.57□□□□□ -0.24
TRIM13-203ENST00000378183 KRTAP26-1Q6PEX3 210 aa13.56□□□□□ -0.24
TRIM13-203ENST00000378183 Q8N814 137 aa13.56□□□□□ -0.24
TRIM13-203ENST00000378183 CLRN3Q8NCR9 226 aa13.56□□□□□ -0.24
TRIM13-203ENST00000378183 C1orf43Q9BWL3 253 aa13.56□□□□□ -0.24
TRIM13-203ENST00000378183 LECT2O14960 151 aa13.55□□□□□ -0.24
TRIM13-203ENST00000378183 PPBPP02775 128 aa13.55□□□□□ -0.24
TRIM13-203ENST00000378183 FGF6P10767 208 aa13.55□□□□□ -0.24
TRIM13-203ENST00000378183 RPL32P62910 135 aaKnown RBP13.55□□□□□ -0.24
TRIM13-203ENST00000378183 HERC2O95714 4834 aa13.54□□□□□ -0.24
TRIM13-203ENST00000378183 TMEM136Q6ZRR5 245 aa13.54□□□□□ -0.24
TRIM13-203ENST00000378183 ORMDL3Q8N138 153 aa13.54□□□□□ -0.24
TRIM13-203ENST00000378183 APOBP04114 4563 aaKnown RBP13.54□□□□□ -0.24
TRIM13-203ENST00000378183 PHOX2AO14813 284 aa13.53□□□□□ -0.24
TRIM13-203ENST00000378183 RHEBQ15382 184 aa13.53□□□□□ -0.24
TRIM13-203ENST00000378183 AMMECR1LQ6DCA0 310 aa13.53□□□□□ -0.24
TRIM13-203ENST00000378183 CDPF1Q6NVV7 123 aa13.53□□□□□ -0.24
TRIM13-203ENST00000378183 RNASEKQ6P5S7 137 aaKnown RBP13.53□□□□□ -0.24
TRIM13-203ENST00000378183 PRELID3AQ96N28 172 aa13.53□□□□□ -0.24
TRIM13-203ENST00000378183 RYR1P21817 5038 aa13.52□□□□□ -0.24
TRIM13-203ENST00000378183 TRAV9-1A0A075B6T8 112 aa13.52□□□□□ -0.25
TRIM13-203ENST00000378183 FCER1GP30273 86 aa13.52□□□□□ -0.25
TRIM13-203ENST00000378183 KIR2DL4Q99706 377 aa13.52□□□□□ -0.25
TRIM13-203ENST00000378183 SMIM2Q9BVW6 85 aa13.52□□□□□ -0.25
TRIM13-203ENST00000378183 IGLV10-54A0A075B6I4 117 aa13.51□□□□□ -0.25
TRIM13-203ENST00000378183 RPS10P5Q9NQ39 176 aa13.51□□□□□ -0.25
TRIM13-203ENST00000378183 APOC3P02656 99 aa13.5□□□□□ -0.25
TRIM13-203ENST00000378183 ZNF25P17030 456 aaPredicted RBP13.5□□□□□ -0.25
TRIM13-203ENST00000378183 MRPL52Q86TS9 123 aaKnown RBP13.5□□□□□ -0.25
TRIM13-203ENST00000378183 TRAV8-4A0A0B4J246 113 aa13.49□□□□□ -0.25
TRIM13-203ENST00000378183 S100PP25815 95 aa13.49□□□□□ -0.25
TRIM13-203ENST00000378183 NTN5Q8WTR8 489 aaPredicted RBP13.49□□□□□ -0.25
TRIM13-203ENST00000378183 HSPG2P98160 4391 aa13.48□□□□□ -0.25
TRIM13-203ENST00000378183 PRSS47A8MTI9 375 aa13.48□□□□□ -0.25
TRIM13-203ENST00000378183 HLA-DQA1P01909 254 aa13.48□□□□□ -0.25
TRIM13-203ENST00000378183 IGLV5-52A0A0A0MRZ9 124 aa13.47□□□□□ -0.25
TRIM13-203ENST00000378183 IGKV3OR2-268A0A0C4DH90 116 aa13.47□□□□□ -0.25
TRIM13-203ENST00000378183 TCAPO15273 167 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms