RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 CITED2Q99967 270 aaPredicted RBP11.55□□□□□ -0.56
CSNK1A1-202ENST00000377843 PRRC2AP48634 2157 aaKnown RBP11.54□□□□□ -0.56
CSNK1A1-202ENST00000377843 LINC00643Q86TS7 51 aa11.54□□□□□ -0.56
CSNK1A1-202ENST00000377843 HRNRQ86YZ3 2850 aaPredicted RBP11.54□□□□□ -0.56
CSNK1A1-202ENST00000377843 ANKHD1Q8IWZ3 2542 aaKnown RBP11.54□□□□□ -0.56
CSNK1A1-202ENST00000377843 MAP1AP78559 2803 aaPredicted RBP11.53□□□□□ -0.56
CSNK1A1-202ENST00000377843 IGHV1-58A0A0C4DH39 117 aa11.53□□□□□ -0.56
CSNK1A1-202ENST00000377843 AKAP6Q13023 2319 aa11.53□□□□□ -0.56
CSNK1A1-202ENST00000377843 MINOS1Q5TGZ0 78 aa11.53□□□□□ -0.56
CSNK1A1-202ENST00000377843 LRRC75A-AS1Q8N1F1 130 aa11.53□□□□□ -0.56
CSNK1A1-202ENST00000377843 EDA2RQ9HAV5 297 aa11.53□□□□□ -0.56
CSNK1A1-202ENST00000377843 HIVEP3Q5T1R4 2406 aa11.53□□□□□ -0.56
CSNK1A1-202ENST00000377843 UTP20O75691 2785 aaKnown RBP11.53□□□□□ -0.56
CSNK1A1-202ENST00000377843 TRAV12-3A0A0B4J271 114 aa11.53□□□□□ -0.56
CSNK1A1-202ENST00000377843 KLLNB2CW77 178 aa11.53□□□□□ -0.56
CSNK1A1-202ENST00000377843 J3KT08 172 aa11.53□□□□□ -0.56
CSNK1A1-202ENST00000377843 ACYP1P07311 99 aa11.53□□□□□ -0.56
CSNK1A1-202ENST00000377843 SDIM1Q6ZPB5 146 aa11.53□□□□□ -0.56
CSNK1A1-202ENST00000377843 MRPS36P82909 103 aaKnown RBP11.52□□□□□ -0.56
CSNK1A1-202ENST00000377843 LINC01560Q8TB33 94 aa11.52□□□□□ -0.56
CSNK1A1-202ENST00000377843 C22orf24Q9Y442 160 aa11.52□□□□□ -0.56
CSNK1A1-202ENST00000377843 FLNCQ14315 2725 aa11.52□□□□□ -0.57
CSNK1A1-202ENST00000377843 UCNP55089 124 aa11.52□□□□□ -0.57
CSNK1A1-202ENST00000377843 CCL21O00585 134 aa11.51□□□□□ -0.57
CSNK1A1-202ENST00000377843 COX7CP15954 63 aa11.51□□□□□ -0.57
CSNK1A1-202ENST00000377843 C5orf38Q86SI9 138 aa11.51□□□□□ -0.57
CSNK1A1-202ENST00000377843 VSIG2Q96IQ7 327 aa11.51□□□□□ -0.57
CSNK1A1-202ENST00000377843 CD28P10747 220 aa11.51□□□□□ -0.57
CSNK1A1-202ENST00000377843 ZFP36P26651 326 aaKnown RBP11.51□□□□□ -0.57
CSNK1A1-202ENST00000377843 A0A1B0GX51 115 aa11.5□□□□□ -0.57
CSNK1A1-202ENST00000377843 DAZ2Q13117 558 aaKnown RBP11.5□□□□□ -0.57
CSNK1A1-202ENST00000377843 DAZ4Q86SG3 579 aaKnown RBP11.5□□□□□ -0.57
CSNK1A1-202ENST00000377843 DAZ1Q9NQZ3 744 aaKnown RBP11.5□□□□□ -0.57
CSNK1A1-202ENST00000377843 DAZ3Q9NR90 486 aaKnown RBP11.5□□□□□ -0.57
CSNK1A1-202ENST00000377843 KLRB1Q12918 225 aa11.5□□□□□ -0.57
CSNK1A1-202ENST00000377843 MINOS1-NBL1R4GNA1 71 aa11.5□□□□□ -0.57
CSNK1A1-202ENST00000377843 EPG5Q9HCE0 2579 aa11.5□□□□□ -0.57
CSNK1A1-202ENST00000377843 Q8N2B8 174 aa11.49□□□□□ -0.57
CSNK1A1-202ENST00000377843 C9orf85Q96MD7 179 aa11.49□□□□□ -0.57
CSNK1A1-202ENST00000377843 IGHV3-16A0A0C4DH30 117 aa11.49□□□□□ -0.57
CSNK1A1-202ENST00000377843 hADV29S1A0JD25 119 aa11.49□□□□□ -0.57
CSNK1A1-202ENST00000377843 EDN2P20800 178 aa11.49□□□□□ -0.57
CSNK1A1-202ENST00000377843 USP24Q9UPU5 2620 aa11.48□□□□□ -0.57
CSNK1A1-202ENST00000377843 CRYBG3Q68DQ2 2970 aa11.48□□□□□ -0.57
CSNK1A1-202ENST00000377843 IGHG2P01859 326 aa11.48□□□□□ -0.57
CSNK1A1-202ENST00000377843 BEAN1Q3B7T3 259 aa11.48□□□□□ -0.57
CSNK1A1-202ENST00000377843 GAGE2AQ6NT46 116 aa11.48□□□□□ -0.57
CSNK1A1-202ENST00000377843 CRYGAP11844 174 aa11.47□□□□□ -0.57
CSNK1A1-202ENST00000377843 CSMD2Q7Z408 3487 aa11.47□□□□□ -0.57
CSNK1A1-202ENST00000377843 TRAV12-2A0A075B6T6 113 aa11.47□□□□□ -0.57
CSNK1A1-202ENST00000377843 KIR2DL5BQ8NHK3 375 aa11.47□□□□□ -0.57
CSNK1A1-202ENST00000377843 COX7A2LO14548 114 aa11.46□□□□□ -0.57
CSNK1A1-202ENST00000377843 TIRAPP58753 221 aa11.46□□□□□ -0.57
CSNK1A1-202ENST00000377843 ATP5G1P05496 136 aa11.46□□□□□ -0.58
CSNK1A1-202ENST00000377843 HIST1H4AP62805 103 aaKnown RBP11.46□□□□□ -0.58
CSNK1A1-202ENST00000377843 TMEM219Q86XT9 240 aa11.46□□□□□ -0.58
CSNK1A1-202ENST00000377843 ADORA2A-AS1P86434 159 aa11.45□□□□□ -0.58
CSNK1A1-202ENST00000377843 Q9UF83 564 aa11.45□□□□□ -0.58
CSNK1A1-202ENST00000377843 OXTP01178 125 aa11.45□□□□□ -0.58
CSNK1A1-202ENST00000377843 FAM218AQ96MZ4 157 aa11.45□□□□□ -0.58
CSNK1A1-202ENST00000377843 SIRPDQ9H106 197 aa11.45□□□□□ -0.58
CSNK1A1-202ENST00000377843 PEMTQ9UBM1 199 aa11.45□□□□□ -0.58
CSNK1A1-202ENST00000377843 PYGO1Q9Y3Y4 419 aa11.45□□□□□ -0.58
CSNK1A1-202ENST00000377843 A0A0U1RRA0 63 aa11.44□□□□□ -0.58
CSNK1A1-202ENST00000377843 RS1O15537 224 aa11.44□□□□□ -0.58
CSNK1A1-202ENST00000377843 IGHV3-11P01762 117 aa11.44□□□□□ -0.58
CSNK1A1-202ENST00000377843 CXCL5P42830 114 aa11.44□□□□□ -0.58
CSNK1A1-202ENST00000377843 PROK1P58294 105 aa11.44□□□□□ -0.58
CSNK1A1-202ENST00000377843 C5orf56Q8N8D9 126 aa11.44□□□□□ -0.58
CSNK1A1-202ENST00000377843 IGHV3OR16-10A0A075B7F0 116 aa11.44□□□□□ -0.58
CSNK1A1-202ENST00000377843 NDUFA4O00483 81 aa11.44□□□□□ -0.58
CSNK1A1-202ENST00000377843 SAA4P35542 130 aa11.44□□□□□ -0.58
CSNK1A1-202ENST00000377843 PRORYQ9H606 182 aa11.44□□□□□ -0.58
CSNK1A1-202ENST00000377843 MYO18BQ8IUG5 2567 aa11.44□□□□□ -0.58
CSNK1A1-202ENST00000377843 IGKV3-20P01619 116 aa11.43□□□□□ -0.58
CSNK1A1-202ENST00000377843 BAALC-AS2P0C853 105 aa11.43□□□□□ -0.58
CSNK1A1-202ENST00000377843 C19orf54Q5BKX5 351 aa11.43□□□□□ -0.58
CSNK1A1-202ENST00000377843 RHPN1-AS1Q9BWJ2 59 aa11.43□□□□□ -0.58
CSNK1A1-202ENST00000377843 IGHV3-73A0A0B4J1V6 119 aa11.43□□□□□ -0.58
CSNK1A1-202ENST00000377843 TINCRA0A1B0GVN0 87 aa11.43□□□□□ -0.58
CSNK1A1-202ENST00000377843 RPS28P62857 69 aaKnown RBP11.43□□□□□ -0.58
CSNK1A1-202ENST00000377843 SOSTDC1Q6X4U4 206 aa11.43□□□□□ -0.58
CSNK1A1-202ENST00000377843 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.43□□□□□ -0.58
CSNK1A1-202ENST00000377843 LINC00308Q8TCZ7 52 aa11.43□□□□□ -0.58
CSNK1A1-202ENST00000377843 UBTD1Q9HAC8 227 aa11.43□□□□□ -0.58
CSNK1A1-202ENST00000377843 TIMM17BO60830 172 aa11.42□□□□□ -0.58
CSNK1A1-202ENST00000377843 ZNF625Q96I27 306 aaPredicted RBP11.42□□□□□ -0.58
CSNK1A1-202ENST00000377843 FAM223BA6NKX1 122 aa11.41□□□□□ -0.58
CSNK1A1-202ENST00000377843 FAM223AQ8IWN6 122 aa11.41□□□□□ -0.58
CSNK1A1-202ENST00000377843 CDKN2A-AS1Q9UH64 79 aa11.41□□□□□ -0.58
CSNK1A1-202ENST00000377843 CENPEQ02224 2701 aa11.41□□□□□ -0.58
CSNK1A1-202ENST00000377843 CELSR1Q9NYQ6 3014 aa11.4□□□□□ -0.58
CSNK1A1-202ENST00000377843 TRAV13-1A0A0B4J241 112 aa11.4□□□□□ -0.58
CSNK1A1-202ENST00000377843 DPH3Q96FX2 82 aa11.4□□□□□ -0.58
CSNK1A1-202ENST00000377843 USP9XQ93008 2570 aaPredicted RBP11.4□□□□□ -0.59
CSNK1A1-202ENST00000377843 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.39□□□□□ -0.59
CSNK1A1-202ENST00000377843 IGKV2-29A2NJV5 120 aaPredicted RBP11.39□□□□□ -0.59
CSNK1A1-202ENST00000377843 Q9HAA7 133 aa11.39□□□□□ -0.59
CSNK1A1-202ENST00000377843 NDUFA1O15239 70 aa11.39□□□□□ -0.59
CSNK1A1-202ENST00000377843 WIPF1O43516 503 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms