RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 Q6ZUT4 128 aa13.42□□□□□ -0.26
CNTNAP3-204ENST00000377656 SPATA12Q7Z6I5 190 aa13.42□□□□□ -0.26
CNTNAP3-204ENST00000377656 TP53TG3Q9ULZ0 132 aa13.42□□□□□ -0.26
CNTNAP3-204ENST00000377656 H3BQ85 93 aa13.42□□□□□ -0.26
CNTNAP3-204ENST00000377656 LY6LH3BQJ8 138 aa13.42□□□□□ -0.26
CNTNAP3-204ENST00000377656 NCR3O14931 201 aa13.42□□□□□ -0.26
CNTNAP3-204ENST00000377656 ZFYVE26Q68DK2 2539 aa13.41□□□□□ -0.26
CNTNAP3-204ENST00000377656 IGHV4-28A0A0C4DH34 117 aa13.41□□□□□ -0.26
CNTNAP3-204ENST00000377656 C11orf71Q6IPW1 123 aa13.4□□□□□ -0.26
CNTNAP3-204ENST00000377656 P0DMU3 169 aa13.4□□□□□ -0.26
CNTNAP3-204ENST00000377656 FAM231AP0DMU4 169 aa13.4□□□□□ -0.26
CNTNAP3-204ENST00000377656 FAM231CP0DMU5 169 aa13.4□□□□□ -0.26
CNTNAP3-204ENST00000377656 WFDC2Q14508 124 aa13.4□□□□□ -0.26
CNTNAP3-204ENST00000377656 UBE2AP49459 152 aa13.39□□□□□ -0.27
CNTNAP3-204ENST00000377656 DIRC1Q969H9 104 aa13.39□□□□□ -0.27
CNTNAP3-204ENST00000377656 TLN2Q9Y4G6 2542 aa13.39□□□□□ -0.27
CNTNAP3-204ENST00000377656 NUP210LQ5VU65 1888 aa13.39□□□□□ -0.27
CNTNAP3-204ENST00000377656 JMJD7-PLA2G4BH0Y9G9 81 aa13.39□□□□□ -0.27
CNTNAP3-204ENST00000377656 NREPQ16612 68 aa13.39□□□□□ -0.27
CNTNAP3-204ENST00000377656 C11orf45Q8TAV5 145 aa13.39□□□□□ -0.27
CNTNAP3-204ENST00000377656 TRAV26-1A0A087WT03 109 aa13.39□□□□□ -0.27
CNTNAP3-204ENST00000377656 ZFAND3Q9H8U3 227 aa13.39□□□□□ -0.27
CNTNAP3-204ENST00000377656 TAX1BP3O14907 124 aa13.38□□□□□ -0.27
CNTNAP3-204ENST00000377656 FAM222AQ5U5X8 452 aa13.38□□□□□ -0.27
CNTNAP3-204ENST00000377656 SMIM9A6NGZ8 99 aa13.38□□□□□ -0.27
CNTNAP3-204ENST00000377656 NDUFB1O75438 58 aa13.38□□□□□ -0.27
CNTNAP3-204ENST00000377656 A0A0B4J2C4 111 aa13.38□□□□□ -0.27
CNTNAP3-204ENST00000377656 GDF5OSQ5U4N7 250 aa13.37□□□□□ -0.27
CNTNAP3-204ENST00000377656 Q6ZSV7 163 aa13.37□□□□□ -0.27
CNTNAP3-204ENST00000377656 MBD6Q96DN6 1003 aa13.37□□□□□ -0.27
CNTNAP3-204ENST00000377656 H3BT86 120 aa13.36□□□□□ -0.27
CNTNAP3-204ENST00000377656 C20orf173Q96LM9 149 aa13.36□□□□□ -0.27
CNTNAP3-204ENST00000377656 LYRM9A8MSI8 78 aa13.35□□□□□ -0.27
CNTNAP3-204ENST00000377656 TRBV10-2A0A0K0K1G8 114 aa13.35□□□□□ -0.27
CNTNAP3-204ENST00000377656 RBM3P98179 157 aaKnown RBP13.35□□□□□ -0.27
CNTNAP3-204ENST00000377656 CLEC2BQ92478 149 aa13.35□□□□□ -0.27
CNTNAP3-204ENST00000377656 INAFM1C9JVW0 142 aa13.35□□□□□ -0.27
CNTNAP3-204ENST00000377656 USP9XQ93008 2570 aaPredicted RBP13.35□□□□□ -0.27
CNTNAP3-204ENST00000377656 ZFAND2AQ8N6M9 145 aa13.35□□□□□ -0.27
CNTNAP3-204ENST00000377656 IGKV3D-7A0A0C4DH55 119 aa13.34□□□□□ -0.27
CNTNAP3-204ENST00000377656 CENPFP49454 3210 aa13.34□□□□□ -0.27
CNTNAP3-204ENST00000377656 LINC00269Q8N2A0 174 aa13.34□□□□□ -0.27
CNTNAP3-204ENST00000377656 ABCA12Q86UK0 2595 aa13.34□□□□□ -0.27
CNTNAP3-204ENST00000377656 REG3AQ06141 175 aa13.33□□□□□ -0.28
CNTNAP3-204ENST00000377656 MIAQ16674 131 aa13.33□□□□□ -0.28
CNTNAP3-204ENST00000377656 NFE4Q86UQ8 179 aa13.33□□□□□ -0.28
CNTNAP3-204ENST00000377656 IL17DQ8TAD2 202 aa13.33□□□□□ -0.28
CNTNAP3-204ENST00000377656 RNASE8Q8TDE3 154 aaKnown RBP13.33□□□□□ -0.28
CNTNAP3-204ENST00000377656 PRRC2AP48634 2157 aaKnown RBP13.33□□□□□ -0.28
CNTNAP3-204ENST00000377656 ZNF843Q8N446 348 aa13.32□□□□□ -0.28
CNTNAP3-204ENST00000377656 C10orf99Q6UWK7 81 aa13.32□□□□□ -0.28
CNTNAP3-204ENST00000377656 UFSP1Q6NVU6 142 aa13.31□□□□□ -0.28
CNTNAP3-204ENST00000377656 LINC00467Q9BRT7 94 aa13.31□□□□□ -0.28
CNTNAP3-204ENST00000377656 A0A0J9YXY3 114 aa13.31□□□□□ -0.28
CNTNAP3-204ENST00000377656 TMEM256-PLSCR3K7ERE1 68 aa13.31□□□□□ -0.28
CNTNAP3-204ENST00000377656 HIGD2BQ4VC39 106 aa13.31□□□□□ -0.28
CNTNAP3-204ENST00000377656 SPANXCQ9NY87 97 aa13.31□□□□□ -0.28
CNTNAP3-204ENST00000377656 CEP295Q9C0D2 2601 aa13.31□□□□□ -0.28
CNTNAP3-204ENST00000377656 KIAA1549Q9HCM3 1950 aa13.31□□□□□ -0.28
CNTNAP3-204ENST00000377656 CDKN2A-AS1Q9UH64 79 aa13.31□□□□□ -0.28
CNTNAP3-204ENST00000377656 TANC2Q9HCD6 1990 aa13.3□□□□□ -0.28
CNTNAP3-204ENST00000377656 FOXI1Q12951 378 aa13.3□□□□□ -0.28
CNTNAP3-204ENST00000377656 CRIP1P50238 77 aa13.3□□□□□ -0.28
CNTNAP3-204ENST00000377656 GOLGB1Q14789 3259 aaKnown RBP13.29□□□□□ -0.28
CNTNAP3-204ENST00000377656 SETD2Q9BYW2 2564 aaPredicted RBP13.29□□□□□ -0.28
CNTNAP3-204ENST00000377656 A0A1B0GX51 115 aa13.29□□□□□ -0.28
CNTNAP3-204ENST00000377656 NEXN-AS1Q8NBZ9 246 aa13.29□□□□□ -0.28
CNTNAP3-204ENST00000377656 COX7BP24311 80 aa13.29□□□□□ -0.28
CNTNAP3-204ENST00000377656 TMEM258P61165 79 aa13.29□□□□□ -0.28
CNTNAP3-204ENST00000377656 PSMG3-AS1Q96PY0 264 aa13.29□□□□□ -0.28
CNTNAP3-204ENST00000377656 B5MCH6 92 aa13.28□□□□□ -0.28
CNTNAP3-204ENST00000377656 MP68P56378 58 aa13.28□□□□□ -0.28
CNTNAP3-204ENST00000377656 Q8N6K4 173 aa13.28□□□□□ -0.28
CNTNAP3-204ENST00000377656 ATOX1O00244 68 aa13.28□□□□□ -0.28
CNTNAP3-204ENST00000377656 PSMB8P28062 276 aa13.28□□□□□ -0.28
CNTNAP3-204ENST00000377656 C14orf177Q52M58 125 aa13.28□□□□□ -0.28
CNTNAP3-204ENST00000377656 IGKV2-24A0A0C4DH68 120 aa13.28□□□□□ -0.28
CNTNAP3-204ENST00000377656 CHCHD10Q8WYQ3 142 aaPredicted RBP13.28□□□□□ -0.28
CNTNAP3-204ENST00000377656 DEFB131BA0A096LNP1 70 aa13.27□□□□□ -0.28
CNTNAP3-204ENST00000377656 C4orf48Q5BLP8 95 aa13.27□□□□□ -0.28
CNTNAP3-204ENST00000377656 HIST2H2BDQ6DRA6 164 aa13.27□□□□□ -0.28
CNTNAP3-204ENST00000377656 H7C423 109 aa13.27□□□□□ -0.29
CNTNAP3-204ENST00000377656 M0QY20 66 aa13.27□□□□□ -0.29
CNTNAP3-204ENST00000377656 IGLV4-3A0A075B6K6 122 aa13.27□□□□□ -0.29
CNTNAP3-204ENST00000377656 PDE6GP18545 87 aa13.27□□□□□ -0.29
CNTNAP3-204ENST00000377656 CFAP126Q5VTH2 177 aa13.26□□□□□ -0.29
CNTNAP3-204ENST00000377656 SHISA2Q6UWI4 295 aa13.26□□□□□ -0.29
CNTNAP3-204ENST00000377656 FAM236AA0A1B0GUQ0 79 aa13.26□□□□□ -0.29
CNTNAP3-204ENST00000377656 FAM236BA0A1B0GV22 79 aa13.26□□□□□ -0.29
CNTNAP3-204ENST00000377656 LINC00482Q8N8I6 264 aa13.26□□□□□ -0.29
CNTNAP3-204ENST00000377656 MIFP14174 115 aa13.25□□□□□ -0.29
CNTNAP3-204ENST00000377656 ZNF22P17026 224 aaPredicted RBP13.25□□□□□ -0.29
CNTNAP3-204ENST00000377656 CHD8Q9HCK8 2581 aa13.25□□□□□ -0.29
CNTNAP3-204ENST00000377656 HILS1P60008 231 aa13.25□□□□□ -0.29
CNTNAP3-204ENST00000377656 USP9YO00507 2555 aaPredicted RBP13.25□□□□□ -0.29
CNTNAP3-204ENST00000377656 TRBV6-4A0A1B0GX49 114 aa13.25□□□□□ -0.29
CNTNAP3-204ENST00000377656 ARHGAP32A7KAX9 2087 aa13.24□□□□□ -0.29
CNTNAP3-204ENST00000377656 PTH2Q96A98 100 aa13.24□□□□□ -0.29
CNTNAP3-204ENST00000377656 ZNF702PQ9H963 129 aa13.24□□□□□ -0.29
CNTNAP3-204ENST00000377656 TNRC6BQ9UPQ9 1833 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms