RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 C20orf203Q8NBC4 194 aa6.08□□□□□ -1.44
C9orf85-202ENST00000377027 STOML3Q8TAV4 291 aa6.08□□□□□ -1.44
C9orf85-202ENST00000377027 FAM213BQ8TBF2 198 aa6.08□□□□□ -1.44
C9orf85-202ENST00000377027 SFT2D1Q8WV19 159 aa6.08□□□□□ -1.44
C9orf85-202ENST00000377027 CHCHD5Q9BSY4 110 aa6.08□□□□□ -1.44
C9orf85-202ENST00000377027 BATF3Q9NR55 127 aa6.08□□□□□ -1.44
C9orf85-202ENST00000377027 IGLV4-60A0A075B6I1 120 aa6.07□□□□□ -1.44
C9orf85-202ENST00000377027 M0QY20 66 aa6.07□□□□□ -1.44
C9orf85-202ENST00000377027 CRPP02741 224 aa6.07□□□□□ -1.44
C9orf85-202ENST00000377027 CIRBPQ14011 172 aaKnown RBP6.07□□□□□ -1.44
C9orf85-202ENST00000377027 ZNF345Q14585 488 aa6.07□□□□□ -1.44
C9orf85-202ENST00000377027 IQCJQ1A5X6 159 aa6.07□□□□□ -1.44
C9orf85-202ENST00000377027 C14orf177Q52M58 125 aa6.07□□□□□ -1.44
C9orf85-202ENST00000377027 SERTAD4-AS1Q5TG53 156 aa6.07□□□□□ -1.44
C9orf85-202ENST00000377027 BAGE2Q86Y30 109 aa6.07□□□□□ -1.44
C9orf85-202ENST00000377027 TRBV20OR9-2A0A075B6H5 130 aa6.06□□□□□ -1.44
C9orf85-202ENST00000377027 IGLV10-54A0A075B6I4 117 aa6.06□□□□□ -1.44
C9orf85-202ENST00000377027 C19orf71A6NCJ1 209 aa6.06□□□□□ -1.44
C9orf85-202ENST00000377027 RPL35P42766 123 aaKnown RBP6.06□□□□□ -1.44
C9orf85-202ENST00000377027 SPANXN1Q5VSR9 72 aa6.06□□□□□ -1.44
C9orf85-202ENST00000377027 TMUB2Q71RG4 321 aa6.06□□□□□ -1.44
C9orf85-202ENST00000377027 C11orf52Q96A22 123 aa6.06□□□□□ -1.44
C9orf85-202ENST00000377027 S100A9P06702 114 aaKnown RBP6.05□□□□□ -1.44
C9orf85-202ENST00000377027 CHTF8P0CG12 524 aa6.05□□□□□ -1.44
C9orf85-202ENST00000377027 DGAT2L7PQ6IED9 249 aa6.05□□□□□ -1.44
C9orf85-202ENST00000377027 KCNIP4Q6PIL6 250 aa6.05□□□□□ -1.44
C9orf85-202ENST00000377027 AP1S3Q96PC3 154 aa6.05□□□□□ -1.44
C9orf85-202ENST00000377027 TRBV25-1A0A075B6N4 114 aa6.04□□□□□ -1.44
C9orf85-202ENST00000377027 RAB19A4D1S5 217 aa6.04□□□□□ -1.44
C9orf85-202ENST00000377027 UMAD1C9J7I0 102 aa6.04□□□□□ -1.44
C9orf85-202ENST00000377027 BCL2L11O43521 198 aa6.04□□□□□ -1.44
C9orf85-202ENST00000377027 NKX2-5P52952 324 aaPredicted RBP6.04□□□□□ -1.44
C9orf85-202ENST00000377027 CNBPP62633 177 aaKnown RBP6.04□□□□□ -1.44
C9orf85-202ENST00000377027 REG3AQ06141 175 aa6.04□□□□□ -1.44
C9orf85-202ENST00000377027 CENPWQ5EE01 88 aa6.04□□□□□ -1.44
C9orf85-202ENST00000377027 IGHV1-24A0A0C4DH33 117 aa6.03□□□□□ -1.44
C9orf85-202ENST00000377027 HMSDA8MTL9 139 aa6.03□□□□□ -1.44
C9orf85-202ENST00000377027 PFDN1O60925 122 aa6.03□□□□□ -1.44
C9orf85-202ENST00000377027 MGPP08493 103 aa6.03□□□□□ -1.44
C9orf85-202ENST00000377027 RGS21Q2M5E4 152 aa6.03□□□□□ -1.44
C9orf85-202ENST00000377027 C15orf56Q8N910 161 aa6.03□□□□□ -1.44
C9orf85-202ENST00000377027 FER1L6-AS1Q8NA97 138 aa6.03□□□□□ -1.44
C9orf85-202ENST00000377027 PKIAP61925 76 aa6.02□□□□□ -1.45
C9orf85-202ENST00000377027 TMEM97Q5BJF2 176 aa6.02□□□□□ -1.45
C9orf85-202ENST00000377027 OR2D3Q8NGH3 330 aa6.02□□□□□ -1.45
C9orf85-202ENST00000377027 SPACA4Q8TDM5 124 aa6.02□□□□□ -1.45
C9orf85-202ENST00000377027 GNG13Q9P2W3 67 aa6.02□□□□□ -1.45
C9orf85-202ENST00000377027 LPAP08519 4548 aa6.01□□□□□ -1.45
C9orf85-202ENST00000377027 A0A087WYN8 130 aa6.01□□□□□ -1.45
C9orf85-202ENST00000377027 TRAV1-1A0A0B4J248 108 aa6.01□□□□□ -1.45
C9orf85-202ENST00000377027 A0A1B0GUV1 79 aa6.01□□□□□ -1.45
C9orf85-202ENST00000377027 RAB5CP51148 216 aa6.01□□□□□ -1.45
C9orf85-202ENST00000377027 LYZL1Q6UWQ5 148 aa6.01□□□□□ -1.45
C9orf85-202ENST00000377027 PGLYRP4Q96LB8 373 aa6.01□□□□□ -1.45
C9orf85-202ENST00000377027 TPPP3Q9BW30 176 aa6.01□□□□□ -1.45
C9orf85-202ENST00000377027 A0A0D9SG52 128 aa6□□□□□ -1.45
C9orf85-202ENST00000377027 hDV102S1A0JD36 115 aa6□□□□□ -1.45
C9orf85-202ENST00000377027 SMIM17P0DL12 118 aa6□□□□□ -1.45
C9orf85-202ENST00000377027 NTF3P20783 257 aa6□□□□□ -1.45
C9orf85-202ENST00000377027 CTRLP40313 264 aa6□□□□□ -1.45
C9orf85-202ENST00000377027 RASL11AQ6T310 242 aa6□□□□□ -1.45
C9orf85-202ENST00000377027 TMEM243Q9BU79 118 aa6□□□□□ -1.45
C9orf85-202ENST00000377027 MANBALQ9NQG1 85 aa6□□□□□ -1.45
C9orf85-202ENST00000377027 TRAV8-4A0A0B4J246 113 aa5.99□□□□□ -1.45
C9orf85-202ENST00000377027 TRAV26-2A0A0B4J265 109 aa5.99□□□□□ -1.45
C9orf85-202ENST00000377027 KANTRA0A1W2PQU2 76 aa5.99□□□□□ -1.45
C9orf85-202ENST00000377027 K7EN84 100 aa5.99□□□□□ -1.45
C9orf85-202ENST00000377027 P01737 135 aa5.99□□□□□ -1.45
C9orf85-202ENST00000377027 FOXA3P55318 350 aaPredicted RBP5.99□□□□□ -1.45
C9orf85-202ENST00000377027 CACNG7P62955 275 aa5.99□□□□□ -1.45
C9orf85-202ENST00000377027 GATD1Q8NB37 220 aa5.99□□□□□ -1.45
C9orf85-202ENST00000377027 CNFNQ9BYD5 112 aa5.99□□□□□ -1.45
C9orf85-202ENST00000377027 NIT2Q9NQR4 276 aa5.99□□□□□ -1.45
C9orf85-202ENST00000377027 IGHV3-64A0A075B6Q5 118 aa5.98□□□□□ -1.45
C9orf85-202ENST00000377027 PHOX2AO14813 284 aa5.98□□□□□ -1.45
C9orf85-202ENST00000377027 RPS20P60866 119 aaKnown RBP5.98□□□□□ -1.45
C9orf85-202ENST00000377027 MEF2BQ02080 365 aaPredicted RBP5.98□□□□□ -1.45
C9orf85-202ENST00000377027 Q6ZRU5 148 aa5.98□□□□□ -1.45
C9orf85-202ENST00000377027 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.98□□□□□ -1.45
C9orf85-202ENST00000377027 SVIPQ8NHG7 77 aa5.98□□□□□ -1.45
C9orf85-202ENST00000377027 PRSS3P2Q8NHM4 247 aa5.98□□□□□ -1.45
C9orf85-202ENST00000377027 GTSF1Q8WW33 167 aa5.98□□□□□ -1.45
C9orf85-202ENST00000377027 RPL39LQ96EH5 51 aaKnown RBP5.98□□□□□ -1.45
C9orf85-202ENST00000377027 DPH3P1Q9H4G8 78 aa5.98□□□□□ -1.45
C9orf85-202ENST00000377027 PLAC8Q9NZF1 115 aa5.98□□□□□ -1.45
C9orf85-202ENST00000377027 H7C1H1 209 aa5.97□□□□□ -1.45
C9orf85-202ENST00000377027 GAS8-AS1O95177 125 aa5.97□□□□□ -1.45
C9orf85-202ENST00000377027 GNG4P50150 75 aa5.97□□□□□ -1.45
C9orf85-202ENST00000377027 SULT1A2P50226 295 aa5.97□□□□□ -1.45
C9orf85-202ENST00000377027 HIGD2BQ4VC39 106 aa5.97□□□□□ -1.45
C9orf85-202ENST00000377027 C9orf62Q8N4C0 152 aa5.97□□□□□ -1.45
C9orf85-202ENST00000377027 SMIM12Q96EX1 92 aa5.97□□□□□ -1.45
C9orf85-202ENST00000377027 RNASE7Q9H1E1 156 aaKnown RBP5.97□□□□□ -1.45
C9orf85-202ENST00000377027 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.96□□□□□ -1.46
C9orf85-202ENST00000377027 IGKV2-29A2NJV5 120 aaPredicted RBP5.96□□□□□ -1.46
C9orf85-202ENST00000377027 F2Z2F3 143 aa5.96□□□□□ -1.46
C9orf85-202ENST00000377027 TRGC1P0CF51 173 aa5.96□□□□□ -1.46
C9orf85-202ENST00000377027 BCL2P10415 239 aa5.96□□□□□ -1.46
C9orf85-202ENST00000377027 AMTP48728 403 aa5.96□□□□□ -1.46
C9orf85-202ENST00000377027 COX6A2Q02221 97 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 167.6 ms